Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.98□□□□□ -2.09
CHAMP1Q96JM3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CHAMP1Q96JM3 MIR302D-201ENST00000362275 68 ntBASIC1.97□□□□□ -2.09
CHAMP1Q96JM3 SNORA22.1-201ENST00000362701 134 ntBASIC1.97□□□□□ -2.09
CHAMP1Q96JM3 Y_RNA.205-201ENST00000364128 113 ntBASIC1.97□□□□□ -2.09
CHAMP1Q96JM3 RNU6-412P-201ENST00000516434 106 ntBASIC1.97□□□□□ -2.09
CHAMP1Q96JM3 AL513534.2-201ENST00000603836 250 ntBASIC1.97□□□□□ -2.09
CHAMP1Q96JM3 AL512598.1-201ENST00000610158 273 ntBASIC1.97□□□□□ -2.09
CHAMP1Q96JM3 AC087741.2-201ENST00000619415 172 ntBASIC1.97□□□□□ -2.09
CHAMP1Q96JM3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHAMP1Q96JM3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.96□□□□□ -2.1
CHAMP1Q96JM3 MIR548D2-201ENST00000384955 97 ntBASIC1.96□□□□□ -2.1
CHAMP1Q96JM3 AL451046.2-201ENST00000403074 277 ntBASIC1.96□□□□□ -2.1
CHAMP1Q96JM3 MIR1270-201ENST00000459320 83 ntBASIC1.96□□□□□ -2.1
CHAMP1Q96JM3 RNU6-322P-201ENST00000516010 103 ntBASIC1.96□□□□□ -2.1
CHAMP1Q96JM3 MIR548AO-201ENST00000579992 96 ntBASIC1.96□□□□□ -2.1
CHAMP1Q96JM3 MIR3163-201ENST00000581592 73 ntBASIC1.96□□□□□ -2.1
CHAMP1Q96JM3 Z97988.1-201ENST00000637697 135 ntBASIC1.96□□□□□ -2.1
CHAMP1Q96JM3 MIR759-201ENST00000390224 91 ntBASIC1.95□□□□□ -2.1
CHAMP1Q96JM3 RNU6-893P-201ENST00000458841 100 ntBASIC1.95□□□□□ -2.1
CHAMP1Q96JM3 AC113410.1-201ENST00000505029 247 ntBASIC1.95□□□□□ -2.1
CHAMP1Q96JM3 RNU6-922P-201ENST00000516753 99 ntBASIC1.95□□□□□ -2.1
CHAMP1Q96JM3 MIR3613-201ENST00000579844 87 ntBASIC1.95□□□□□ -2.1
CHAMP1Q96JM3 MIR3192-201ENST00000584920 77 ntBASIC1.95□□□□□ -2.1
CHAMP1Q96JM3 RNU6-94P-201ENST00000607728 107 ntBASIC1.95□□□□□ -2.1
CHAMP1Q96JM3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.95□□□□□ -2.1
CHAMP1Q96JM3 SNORA63.5-201ENST00000363548 123 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 RNU6-554P-201ENST00000410466 106 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 RNA5SP261-201ENST00000410536 106 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 snoU13.25-201ENST00000458945 104 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 RNU7-113P-201ENST00000459273 62 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 AC005908.1-201ENST00000468701 347 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 MIR3122-201ENST00000577243 73 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 uc_338.28-201ENST00000612082 187 ntBASIC1.94□□□□□ -2.1
CHAMP1Q96JM3 SNORA67.5-201ENST00000391036 107 ntBASIC1.93□□□□□ -2.1
CHAMP1Q96JM3 AC090844.1-201ENST00000422019 156 ntBASIC1.93□□□□□ -2.1
CHAMP1Q96JM3 RNU7-6P-201ENST00000516845 62 ntBASIC1.93□□□□□ -2.1
CHAMP1Q96JM3 MIR3618-201ENST00000580330 88 ntBASIC1.93□□□□□ -2.1
CHAMP1Q96JM3 MIR4285-201ENST00000581001 85 ntBASIC1.93□□□□□ -2.1
CHAMP1Q96JM3 AL096861.1-201ENST00000610899 123 ntBASIC1.93□□□□□ -2.1
CHAMP1Q96JM3 MIR8065-201ENST00000620577 100 ntBASIC1.93□□□□□ -2.1
CHAMP1Q96JM3 MIR4251-201ENST00000635819 61 ntBASIC1.93□□□□□ -2.1
CHAMP1Q96JM3 SNORD115-19-201ENST00000363098 82 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 SNORD115-18-201ENST00000363293 82 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 SNORD115-17-201ENST00000364612 82 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 U8.6-201ENST00000364939 135 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 RNU6-602P-201ENST00000411155 105 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 RPS3AP1-201ENST00000413190 320 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 RPL39P34-201ENST00000477141 156 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 AL589743.1-201ENST00000551932 2712 ntBASIC1.92□□□□□ -2.1
CHAMP1Q96JM3 SNORD1A-201ENST00000364968 72 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 RNU6-342P-201ENST00000384521 104 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 MIR1302-7-201ENST00000408841 72 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 RNU4-69P-201ENST00000410677 143 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 AC009474.2-201ENST00000451383 136 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 RNA5SP233-201ENST00000459153 113 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 SNORD111.1-201ENST00000516421 86 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 MIR4303-201ENST00000581299 66 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 MIR548AE2-201ENST00000583456 67 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.91□□□□□ -2.1
CHAMP1Q96JM3 SNORA1.1-201ENST00000364671 133 ntBASIC1.9□□□□□ -2.11
CHAMP1Q96JM3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.9□□□□□ -2.11
CHAMP1Q96JM3 RNU7-95P-201ENST00000459222 64 ntBASIC1.9□□□□□ -2.11
CHAMP1Q96JM3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.9□□□□□ -2.11
CHAMP1Q96JM3 RNA5SP33-201ENST00000516687 98 ntBASIC1.9□□□□□ -2.11
CHAMP1Q96JM3 AC068339.1-201ENST00000526965 141 ntBASIC1.9□□□□□ -2.11
CHAMP1Q96JM3 MIR5009-201ENST00000578736 100 ntBASIC1.9□□□□□ -2.11
CHAMP1Q96JM3 MIR450A1-201ENST00000362262 91 ntBASIC1.89□□□□□ -2.11
CHAMP1Q96JM3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.89□□□□□ -2.11
CHAMP1Q96JM3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.89□□□□□ -2.11
CHAMP1Q96JM3 MIR30A-201ENST00000385092 71 ntBASIC1.89□□□□□ -2.11
CHAMP1Q96JM3 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
CHAMP1Q96JM3 AL162726.3-218ENST00000636401 95 ntBASIC1.89□□□□□ -2.11
CHAMP1Q96JM3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.89□□□□□ -2.11
CHAMP1Q96JM3 RNU6-392P-201ENST00000364926 101 ntBASIC1.88□□□□□ -2.11
CHAMP1Q96JM3 MIR1323-201ENST00000408090 73 ntBASIC1.88□□□□□ -2.11
CHAMP1Q96JM3 AL031737.1-201ENST00000450125 223 ntBASIC1.88□□□□□ -2.11
CHAMP1Q96JM3 snoU13.9-201ENST00000458927 103 ntBASIC1.88□□□□□ -2.11
CHAMP1Q96JM3 AP003716.2-201ENST00000528260 108 ntBASIC1.88□□□□□ -2.11
CHAMP1Q96JM3 AL357312.1-201ENST00000603879 298 ntBASIC1.88□□□□□ -2.11
CHAMP1Q96JM3 MIR1255B1-201ENST00000636325 63 ntBASIC1.88□□□□□ -2.11
CHAMP1Q96JM3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHAMP1Q96JM3 HSPE1P24-201ENST00000450782 238 ntBASIC1.87□□□□□ -2.11
CHAMP1Q96JM3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.87□□□□□ -2.11
CHAMP1Q96JM3 MIR8063-201ENST00000621930 81 ntBASIC1.87□□□□□ -2.11
CHAMP1Q96JM3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CHAMP1Q96JM3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHAMP1Q96JM3 RNA5SP48-201ENST00000363969 126 ntBASIC1.86□□□□□ -2.11
CHAMP1Q96JM3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.86□□□□□ -2.11
CHAMP1Q96JM3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 276.1 ms