Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR6515-201ENST00000619843 57 ntBASIC1.12□□□□□ -2.23
HMGB4Q8WW32 MIR6841-201ENST00000637129 72 ntBASIC1.12□□□□□ -2.23
HMGB4Q8WW32 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HMGB4Q8WW32 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
HMGB4Q8WW32 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.120-201ENST00000363304 110 ntBASIC1.11□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.354-201ENST00000365448 111 ntBASIC1.11□□□□□ -2.23
HMGB4Q8WW32 SNORA20-201ENST00000384662 132 ntBASIC1.11□□□□□ -2.23
HMGB4Q8WW32 MIR548J-201ENST00000408833 112 ntBASIC1.11□□□□□ -2.23
HMGB4Q8WW32 RNU6-113P-201ENST00000516653 101 ntBASIC1.11□□□□□ -2.23
HMGB4Q8WW32 RNU4-16P-201ENST00000364737 141 ntBASIC1.1□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.400-201ENST00000383963 111 ntBASIC1.1□□□□□ -2.23
HMGB4Q8WW32 SNORD12C-201ENST00000386307 89 ntBASIC1.1□□□□□ -2.23
HMGB4Q8WW32 MT-TR-201ENST00000387439 65 ntBASIC1.1□□□□□ -2.23
HMGB4Q8WW32 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGB4Q8WW32 RNU6-1223P-201ENST00000517124 104 ntBASIC1.1□□□□□ -2.23
HMGB4Q8WW32 RNU6-94P-201ENST00000607728 107 ntBASIC1.1□□□□□ -2.23
HMGB4Q8WW32 MIR6740-201ENST00000618268 113 ntBASIC1.1□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.170-201ENST00000363746 110 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 SNORD114-24-201ENST00000365029 72 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 SNORD18B-201ENST00000365659 72 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 RNU6-209P-201ENST00000384118 107 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 MIR613-201ENST00000385248 95 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 MIR513C-201ENST00000401352 84 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 RNU7-62P-201ENST00000458856 62 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 snoU13.2-201ENST00000459201 104 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 Y_RNA.686-201ENST00000516548 134 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 MIR548X2-201ENST00000579776 100 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 AC011603.4-201ENST00000611325 277 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 AC012676.2-201ENST00000619258 186 ntBASIC1.09□□□□□ -2.23
HMGB4Q8WW32 SNORA22.1-201ENST00000362701 134 ntBASIC1.08□□□□□ -2.24
HMGB4Q8WW32 Y_RNA.215-201ENST00000364204 112 ntBASIC1.08□□□□□ -2.24
HMGB4Q8WW32 AL603914.1-201ENST00000401964 204 ntBASIC1.08□□□□□ -2.24
HMGB4Q8WW32 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.08□□□□□ -2.24
HMGB4Q8WW32 Y_RNA.651-201ENST00000459380 103 ntBASIC1.08□□□□□ -2.24
HMGB4Q8WW32 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
HMGB4Q8WW32 AL391516.1-201ENST00000554380 2449 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 RNU6-508P-201ENST00000363231 103 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 MIR588-201ENST00000384900 83 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 MIR563-201ENST00000385080 79 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 POLR2J4-204ENST00000418424 324 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 FABP5P4-201ENST00000437203 171 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 RNU6-893P-201ENST00000458841 100 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 RNU7-200P-201ENST00000516105 62 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 SNORA25.12-201ENST00000516202 82 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 Y_RNA.690-201ENST00000516603 95 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 RNU6-255P-201ENST00000516957 105 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 uc_338.6-201ENST00000613544 171 ntBASIC1.07□□□□□ -2.24
HMGB4Q8WW32 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
HMGB4Q8WW32 RNU6-309P-201ENST00000364573 106 ntBASIC1.06□□□□□ -2.24
HMGB4Q8WW32 MIR7-2-201ENST00000384970 110 ntBASIC1.06□□□□□ -2.24
HMGB4Q8WW32 RNU6-460P-201ENST00000391158 108 ntBASIC1.06□□□□□ -2.24
HMGB4Q8WW32 RNU6-994P-201ENST00000410507 111 ntBASIC1.06□□□□□ -2.24
HMGB4Q8WW32 RNA5SP144-201ENST00000410846 116 ntBASIC1.06□□□□□ -2.24
HMGB4Q8WW32 snoU13.21-201ENST00000459368 105 ntBASIC1.06□□□□□ -2.24
HMGB4Q8WW32 Y_RNA.757-201ENST00000578934 114 ntBASIC1.06□□□□□ -2.24
HMGB4Q8WW32 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
HMGB4Q8WW32 RNU6-690P-201ENST00000365242 106 ntBASIC1.05□□□□□ -2.24
HMGB4Q8WW32 MIR569-201ENST00000385228 96 ntBASIC1.05□□□□□ -2.24
HMGB4Q8WW32 RNU6-1165P-201ENST00000410119 107 ntBASIC1.05□□□□□ -2.24
HMGB4Q8WW32 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
HMGB4Q8WW32 RNA5SP480-201ENST00000516840 109 ntBASIC1.05□□□□□ -2.24
HMGB4Q8WW32 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
HMGB4Q8WW32 RNU6-915P-201ENST00000364943 103 ntBASIC1.04□□□□□ -2.24
HMGB4Q8WW32 Y_RNA.540-201ENST00000384638 111 ntBASIC1.04□□□□□ -2.24
HMGB4Q8WW32 RNU6-240P-201ENST00000516098 97 ntBASIC1.04□□□□□ -2.24
HMGB4Q8WW32 RNU6-1258P-201ENST00000516911 111 ntBASIC1.04□□□□□ -2.24
HMGB4Q8WW32 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMGB4Q8WW32 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGB4Q8WW32 MIR1827-201ENST00000408549 66 ntBASIC1.03□□□□□ -2.24
HMGB4Q8WW32 MIR18B-201ENST00000454574 71 ntBASIC1.03□□□□□ -2.24
HMGB4Q8WW32 AC067940.1-201ENST00000458411 300 ntBASIC1.03□□□□□ -2.24
HMGB4Q8WW32 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.03□□□□□ -2.24
HMGB4Q8WW32 AP001340.1-201ENST00000624405 217 ntBASIC1.03□□□□□ -2.24
HMGB4Q8WW32 AC010332.2-201ENST00000613083 1904 ntBASIC1.03□□□□□ -2.25
HMGB4Q8WW32 RNU6-369P-201ENST00000362515 102 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 RNU6-934P-201ENST00000365154 107 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 RNY1P5-201ENST00000383890 115 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 Y_RNA.420-201ENST00000384043 110 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 Y_RNA.488-201ENST00000384403 102 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 SNORD83.1-201ENST00000411362 77 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 AL022718.1-201ENST00000412004 84 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 RPS26P5-201ENST00000418544 335 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 U7.7-201ENST00000459276 60 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 PDCD5P2-201ENST00000507570 312 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 RNA5SP255-201ENST00000516370 107 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.02□□□□□ -2.25
HMGB4Q8WW32 AC133485.4-201ENST00000561835 220 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 AC138907.4-201ENST00000570107 226 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 MIR4305-201ENST00000583252 102 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.02□□□□□ -2.25
HMGB4Q8WW32 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
HMGB4Q8WW32 MIR30D-201ENST00000362283 70 ntBASIC1.01□□□□□ -2.25
HMGB4Q8WW32 Y_RNA.171-201ENST00000363760 102 ntBASIC1.01□□□□□ -2.25
HMGB4Q8WW32 Y_RNA.506-201ENST00000384494 102 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms