Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 MTND5P41-201ENST00000517498 206 ntBASIC0.86□□□□□ -2.27
ZC3H3Q8IXZ2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.86□□□□□ -2.27
ZC3H3Q8IXZ2 MIR548AO-201ENST00000579992 96 ntBASIC0.86□□□□□ -2.27
ZC3H3Q8IXZ2 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.86□□□□□ -2.27
ZC3H3Q8IXZ2 MIR8055-201ENST00000610739 97 ntBASIC0.86□□□□□ -2.27
ZC3H3Q8IXZ2 MTND5P32-201ENST00000560711 1802 ntBASIC0.86□□□□□ -2.27
ZC3H3Q8IXZ2 MIR302B-201ENST00000362188 73 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 MIR342-201ENST00000362212 99 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 Y_RNA.215-201ENST00000364204 112 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 RNU1-133P-201ENST00000364867 167 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 RNU6-1062P-201ENST00000383908 107 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 RNU6-613P-201ENST00000410412 108 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 MTATP6P21-201ENST00000440681 189 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 RNU7-197P-201ENST00000458836 62 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 SNORD124-201ENST00000459577 104 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 RNU7-200P-201ENST00000516105 62 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 RNA5SP236-201ENST00000516169 116 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 MIR2115-201ENST00000516657 100 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 RNU7-70P-201ENST00000516941 66 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 MIR548X2-201ENST00000579776 100 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 RN7SL793P-201ENST00000583259 296 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 AC091932.4-201ENST00000623386 200 ntBASIC0.85□□□□□ -2.27
ZC3H3Q8IXZ2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 Y_RNA.120-201ENST00000363304 110 ntBASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 RNU6-396P-201ENST00000365369 105 ntBASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 SNORD18B-201ENST00000365659 72 ntBASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 RNY1P5-201ENST00000383890 115 ntBASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 RNU6-913P-201ENST00000390913 95 ntBASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 MIR513C-201ENST00000401352 84 ntBASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 SNORD111-201ENST00000408139 94 ntBASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
ZC3H3Q8IXZ2 RNY1P11-201ENST00000363759 113 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 MT-TN-201ENST00000387400 73 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 MIR942-201ENST00000401111 86 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 RNA5SP261-201ENST00000410536 106 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 RPL39P28-201ENST00000465655 155 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 AL020996.3-201ENST00000606617 222 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 Z97988.1-201ENST00000637697 135 ntBASIC0.83□□□□□ -2.28
ZC3H3Q8IXZ2 AL596211.1-201ENST00000569873 2277 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 SNORD113.3-201ENST00000364630 78 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 Y_RNA.488-201ENST00000384403 102 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 Y_RNA.506-201ENST00000384494 102 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 RNY1P4-201ENST00000384595 115 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 MIR216A-201ENST00000385063 110 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-1319P-201ENST00000390855 104 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-747P-201ENST00000390928 104 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-241P-201ENST00000391148 104 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 SNORA26.6-201ENST00000391256 115 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 AL603914.1-201ENST00000401964 204 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-177P-201ENST00000411257 104 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 RNU2-60P-201ENST00000517290 128 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 MIR3152-201ENST00000579801 74 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 MIR6717-201ENST00000622747 73 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 AP001340.1-201ENST00000624405 217 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 MIR6516-201ENST00000630554 81 ntBASIC0.82□□□□□ -2.28
ZC3H3Q8IXZ2 MIR377-201ENST00000362145 69 ntBASIC0.81□□□□□ -2.28
ZC3H3Q8IXZ2 Y_RNA.430-201ENST00000384081 110 ntBASIC0.81□□□□□ -2.28
ZC3H3Q8IXZ2 MIR569-201ENST00000385228 96 ntBASIC0.81□□□□□ -2.28
ZC3H3Q8IXZ2 SNORA25.12-201ENST00000516202 82 ntBASIC0.81□□□□□ -2.28
ZC3H3Q8IXZ2 RNA5SP255-201ENST00000516370 107 ntBASIC0.81□□□□□ -2.28
ZC3H3Q8IXZ2 AC036111.3-201ENST00000526389 112 ntBASIC0.81□□□□□ -2.28
ZC3H3Q8IXZ2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.81□□□□□ -2.28
ZC3H3Q8IXZ2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
ZC3H3Q8IXZ2 AC011603.4-201ENST00000611325 277 ntBASIC0.81□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-349P-201ENST00000362402 107 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 Y_RNA.168-201ENST00000363740 102 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 SNORA1.1-201ENST00000364671 133 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-746P-201ENST00000384112 109 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 RNY1P6-201ENST00000384193 109 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 SNORD38B-201ENST00000384690 67 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 AC090844.1-201ENST00000422019 156 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-893P-201ENST00000458841 100 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 U7.7-201ENST00000459276 60 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 Y_RNA.690-201ENST00000516603 95 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 AL136317.1-201ENST00000612653 226 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 AC021613.1-201ENST00000623880 111 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 SNORD38B-202ENST00000625943 69 ntBASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-654P-201ENST00000364373 107 ntBASIC0.79□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-309P-201ENST00000364573 106 ntBASIC0.79□□□□□ -2.28
ZC3H3Q8IXZ2 Y_RNA.343-201ENST00000365354 112 ntBASIC0.79□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-125P-201ENST00000384505 107 ntBASIC0.79□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-460P-201ENST00000391158 108 ntBASIC0.79□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-1190P-201ENST00000410811 104 ntBASIC0.79□□□□□ -2.28
ZC3H3Q8IXZ2 RNU6-602P-201ENST00000411155 105 ntBASIC0.79□□□□□ -2.28
ZC3H3Q8IXZ2 RPS3AP1-201ENST00000413190 320 ntBASIC0.79□□□□□ -2.28
ZC3H3Q8IXZ2 AC244023.1-201ENST00000426884 112 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms