Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SNORD38B-202ENST00000625943 69 ntBASIC2.7□□□□□ -1.98
RNF20Q5VTR2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RNF20Q5VTR2 AC004965.1-201ENST00000413033 213 ntBASIC2.69□□□□□ -1.98
RNF20Q5VTR2 AC027119.1-201ENST00000440877 241 ntBASIC2.69□□□□□ -1.98
RNF20Q5VTR2 RNA5SP445-201ENST00000515889 115 ntBASIC2.69□□□□□ -1.98
RNF20Q5VTR2 MTND5P40-201ENST00000559945 246 ntBASIC2.69□□□□□ -1.98
RNF20Q5VTR2 MIR3935-201ENST00000583472 104 ntBASIC2.69□□□□□ -1.98
RNF20Q5VTR2 MIR6852-201ENST00000621699 66 ntBASIC2.69□□□□□ -1.98
RNF20Q5VTR2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.69□□□□□ -1.98
RNF20Q5VTR2 SCARNA15.3-201ENST00000626315 122 ntBASIC2.69□□□□□ -1.98
RNF20Q5VTR2 MIR548BB-201ENST00000626714 66 ntBASIC2.69□□□□□ -1.98
RNF20Q5VTR2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF20Q5VTR2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF20Q5VTR2 Y_RNA.98-201ENST00000363109 102 ntBASIC2.68□□□□□ -1.98
RNF20Q5VTR2 RNY1P13-201ENST00000365030 105 ntBASIC2.68□□□□□ -1.98
RNF20Q5VTR2 SNORA67.4-201ENST00000384688 142 ntBASIC2.68□□□□□ -1.98
RNF20Q5VTR2 RNA5SP237-201ENST00000410414 113 ntBASIC2.68□□□□□ -1.98
RNF20Q5VTR2 RNU6-322P-201ENST00000516010 103 ntBASIC2.68□□□□□ -1.98
RNF20Q5VTR2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.68□□□□□ -1.98
RNF20Q5VTR2 AC012676.2-201ENST00000619258 186 ntBASIC2.68□□□□□ -1.98
RNF20Q5VTR2 RNU6-509P-201ENST00000363519 107 ntBASIC2.67□□□□□ -1.98
RNF20Q5VTR2 RNA5SP259-201ENST00000365541 109 ntBASIC2.67□□□□□ -1.98
RNF20Q5VTR2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF20Q5VTR2 AC009474.2-201ENST00000451383 136 ntBASIC2.67□□□□□ -1.98
RNF20Q5VTR2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.67□□□□□ -1.98
RNF20Q5VTR2 AC006160.2-201ENST00000637708 154 ntBASIC2.67□□□□□ -1.98
RNF20Q5VTR2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.67□□□□□ -1.98
RNF20Q5VTR2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF20Q5VTR2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNA5SP276-201ENST00000362580 94 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 MIR194-1-201ENST00000384892 85 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-447P-201ENST00000410293 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-1118P-201ENST00000410382 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-1076P-201ENST00000410397 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-355P-201ENST00000410427 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-791P-201ENST00000410467 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-705P-201ENST00000410601 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-1100P-201ENST00000410691 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-860P-201ENST00000410860 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-1217P-201ENST00000411276 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 RNU6-785P-201ENST00000411324 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 AC121758.2-201ENST00000553271 193 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 AC020891.4-201ENST00000605745 93 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 U6.90-201ENST00000614007 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 U6.70-201ENST00000620287 104 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 MIR6132-201ENST00000622083 109 ntBASIC2.66□□□□□ -1.98
RNF20Q5VTR2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RNF20Q5VTR2 RNA5SP289-201ENST00000362332 137 ntBASIC2.65□□□□□ -1.99
RNF20Q5VTR2 Y_RNA.221-201ENST00000364248 96 ntBASIC2.65□□□□□ -1.99
RNF20Q5VTR2 SNORD38.2-201ENST00000384470 69 ntBASIC2.65□□□□□ -1.99
RNF20Q5VTR2 MIR221-201ENST00000385135 110 ntBASIC2.65□□□□□ -1.99
RNF20Q5VTR2 MIR653-201ENST00000385279 96 ntBASIC2.65□□□□□ -1.99
RNF20Q5VTR2 AC141846.1-201ENST00000568348 142 ntBASIC2.65□□□□□ -1.99
RNF20Q5VTR2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF20Q5VTR2 RNA5SP37-201ENST00000365420 130 ntBASIC2.64□□□□□ -1.99
RNF20Q5VTR2 RNU6-652P-201ENST00000365488 107 ntBASIC2.64□□□□□ -1.99
RNF20Q5VTR2 MIR181B2-201ENST00000385004 89 ntBASIC2.64□□□□□ -1.99
RNF20Q5VTR2 SNORA48.3-201ENST00000391081 134 ntBASIC2.64□□□□□ -1.99
RNF20Q5VTR2 RNU6-279P-201ENST00000391297 101 ntBASIC2.64□□□□□ -1.99
RNF20Q5VTR2 RNA5SP200-201ENST00000516360 103 ntBASIC2.64□□□□□ -1.99
RNF20Q5VTR2 RNU2-19P-201ENST00000517288 84 ntBASIC2.64□□□□□ -1.99
RNF20Q5VTR2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.64□□□□□ -1.99
RNF20Q5VTR2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RNF20Q5VTR2 RNU6-633P-201ENST00000362612 103 ntBASIC2.63□□□□□ -1.99
RNF20Q5VTR2 RNU6-301P-201ENST00000384277 107 ntBASIC2.63□□□□□ -1.99
RNF20Q5VTR2 MIR513A1-201ENST00000385138 129 ntBASIC2.63□□□□□ -1.99
RNF20Q5VTR2 MIR524-201ENST00000385242 87 ntBASIC2.63□□□□□ -1.99
RNF20Q5VTR2 UBE2DNL-203ENST00000474922 222 ntBASIC2.63□□□□□ -1.99
RNF20Q5VTR2 AC104435.1-201ENST00000483483 166 ntBASIC2.63□□□□□ -1.99
RNF20Q5VTR2 RNU6-857P-201ENST00000515893 110 ntBASIC2.63□□□□□ -1.99
RNF20Q5VTR2 AL513043.2-201ENST00000573941 143 ntBASIC2.63□□□□□ -1.99
RNF20Q5VTR2 AP001362.1-201ENST00000625165 124 ntBASIC2.63□□□□□ -1.99
RNF20Q5VTR2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF20Q5VTR2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RNF20Q5VTR2 Y_RNA.173-201ENST00000363776 113 ntBASIC2.62□□□□□ -1.99
RNF20Q5VTR2 SNORD115-27-201ENST00000364430 82 ntBASIC2.62□□□□□ -1.99
RNF20Q5VTR2 RNU6-613P-201ENST00000410412 108 ntBASIC2.62□□□□□ -1.99
RNF20Q5VTR2 RNU4-53P-201ENST00000410828 140 ntBASIC2.62□□□□□ -1.99
RNF20Q5VTR2 SNORA59A-201ENST00000459326 152 ntBASIC2.62□□□□□ -1.99
RNF20Q5VTR2 AC055731.1-201ENST00000474387 401 ntBASIC2.62□□□□□ -1.99
RNF20Q5VTR2 SNORD111.1-201ENST00000516421 86 ntBASIC2.62□□□□□ -1.99
RNF20Q5VTR2 RNU6-922P-201ENST00000516753 99 ntBASIC2.62□□□□□ -1.99
RNF20Q5VTR2 AC133485.1-201ENST00000567176 124 ntBASIC2.62□□□□□ -1.99
RNF20Q5VTR2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF20Q5VTR2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF20Q5VTR2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.62□□□□□ -1.99
RNF20Q5VTR2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF20Q5VTR2 RNU6-439P-201ENST00000384188 106 ntBASIC2.61□□□□□ -1.99
RNF20Q5VTR2 SNORD23.1-201ENST00000408212 104 ntBASIC2.61□□□□□ -1.99
RNF20Q5VTR2 AC244023.1-201ENST00000426884 112 ntBASIC2.61□□□□□ -1.99
RNF20Q5VTR2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.61□□□□□ -1.99
RNF20Q5VTR2 AC242498.1-201ENST00000604134 111 ntBASIC2.61□□□□□ -1.99
RNF20Q5VTR2 AC245884.12-201ENST00000615364 59 ntBASIC2.61□□□□□ -1.99
RNF20Q5VTR2 AL662814.1-201ENST00000617364 121 ntBASIC2.61□□□□□ -1.99
RNF20Q5VTR2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.61□□□□□ -1.99
RNF20Q5VTR2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF20Q5VTR2 PRELID3BP2-201ENST00000605362 201 ntBASIC2.6□□□□□ -1.99
RNF20Q5VTR2 ZNF658B-202ENST00000615961 3375 ntBASIC2.6□□□□□ -1.99
RNF20Q5VTR2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF20Q5VTR2 MIR449A-201ENST00000362113 91 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms