Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 SNORA31.2-201ENST00000516019 134 ntBASIC1.86□□□□□ -2.11
ZNF394Q53GI3 RNU6-412P-201ENST00000516434 106 ntBASIC1.86□□□□□ -2.11
ZNF394Q53GI3 AC007012.1-201ENST00000567192 175 ntBASIC1.86□□□□□ -2.11
ZNF394Q53GI3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ZNF394Q53GI3 Y_RNA.470-201ENST00000384307 117 ntBASIC1.85□□□□□ -2.11
ZNF394Q53GI3 MIR548D2-201ENST00000384955 97 ntBASIC1.85□□□□□ -2.11
ZNF394Q53GI3 MIR548A1-201ENST00000385041 97 ntBASIC1.85□□□□□ -2.11
ZNF394Q53GI3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.85□□□□□ -2.11
ZNF394Q53GI3 AC048334.1-201ENST00000477975 159 ntBASIC1.85□□□□□ -2.11
ZNF394Q53GI3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.85□□□□□ -2.11
ZNF394Q53GI3 SEPT14P17-201ENST00000617978 177 ntBASIC1.85□□□□□ -2.11
ZNF394Q53GI3 RNU6-1325P-201ENST00000364905 105 ntBASIC1.84□□□□□ -2.11
ZNF394Q53GI3 RNU6-215P-201ENST00000365169 102 ntBASIC1.84□□□□□ -2.11
ZNF394Q53GI3 RNU6-997P-201ENST00000384725 107 ntBASIC1.84□□□□□ -2.11
ZNF394Q53GI3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.84□□□□□ -2.11
ZNF394Q53GI3 snoU13.2-201ENST00000459201 104 ntBASIC1.84□□□□□ -2.11
ZNF394Q53GI3 RNU7-6P-201ENST00000516845 62 ntBASIC1.84□□□□□ -2.11
ZNF394Q53GI3 MIR548AE2-201ENST00000583456 67 ntBASIC1.84□□□□□ -2.11
ZNF394Q53GI3 MIR6516-201ENST00000630554 81 ntBASIC1.84□□□□□ -2.11
ZNF394Q53GI3 SNORD115-19-201ENST00000363098 82 ntBASIC1.83□□□□□ -2.12
ZNF394Q53GI3 SNORD115-18-201ENST00000363293 82 ntBASIC1.83□□□□□ -2.12
ZNF394Q53GI3 SNORD115-17-201ENST00000364612 82 ntBASIC1.83□□□□□ -2.12
ZNF394Q53GI3 RNA5SP237-201ENST00000410414 113 ntBASIC1.83□□□□□ -2.12
ZNF394Q53GI3 AC244023.1-201ENST00000426884 112 ntBASIC1.83□□□□□ -2.12
ZNF394Q53GI3 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
ZNF394Q53GI3 AC242498.1-201ENST00000604134 111 ntBASIC1.83□□□□□ -2.12
ZNF394Q53GI3 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 SNORA18-201ENST00000384416 132 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 SNORD12C-201ENST00000386307 89 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 MT-TI-201ENST00000387365 69 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 MIR764-201ENST00000390811 85 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 SNORA26.9-201ENST00000391322 122 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 SNORA25.15-201ENST00000516487 89 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 RNU6-919P-201ENST00000516731 104 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 RNU7-35P-201ENST00000517174 62 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 MIR6129-201ENST00000616087 109 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 AL353997.5-201ENST00000618886 171 ntBASIC1.82□□□□□ -2.12
ZNF394Q53GI3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
ZNF394Q53GI3 AL589743.1-201ENST00000551932 2712 ntBASIC1.81□□□□□ -2.12
ZNF394Q53GI3 Y_RNA.281-201ENST00000364774 94 ntBASIC1.81□□□□□ -2.12
ZNF394Q53GI3 SNORA80D-201ENST00000384488 135 ntBASIC1.81□□□□□ -2.12
ZNF394Q53GI3 AL591704.2-201ENST00000421658 181 ntBASIC1.81□□□□□ -2.12
ZNF394Q53GI3 RPL39P34-201ENST00000477141 156 ntBASIC1.81□□□□□ -2.12
ZNF394Q53GI3 RNU6-589P-201ENST00000516485 107 ntBASIC1.81□□□□□ -2.12
ZNF394Q53GI3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.81□□□□□ -2.12
ZNF394Q53GI3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.8□□□□□ -2.12
ZNF394Q53GI3 RNU6-429P-201ENST00000384582 108 ntBASIC1.8□□□□□ -2.12
ZNF394Q53GI3 MIR588-201ENST00000384900 83 ntBASIC1.8□□□□□ -2.12
ZNF394Q53GI3 SNORD12-201ENST00000391002 90 ntBASIC1.8□□□□□ -2.12
ZNF394Q53GI3 Y_RNA.709-201ENST00000516952 92 ntBASIC1.8□□□□□ -2.12
ZNF394Q53GI3 Y_RNA.35-201ENST00000362601 101 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 RNU6-580P-201ENST00000365159 107 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 Y_RNA.362-201ENST00000365518 110 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 RNU6-342P-201ENST00000384521 104 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 SNORD20-201ENST00000384550 80 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 MIR563-201ENST00000385080 79 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 RNU7-62P-201ENST00000458856 62 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 AL662814.1-201ENST00000617364 121 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 AC087741.2-201ENST00000619415 172 ntBASIC1.79□□□□□ -2.12
ZNF394Q53GI3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.78□□□□□ -2.12
ZNF394Q53GI3 MRPL35P3-201ENST00000421557 364 ntBASIC1.78□□□□□ -2.12
ZNF394Q53GI3 AL161722.3-201ENST00000605789 2983 ntBASIC1.78□□□□□ -2.12
ZNF394Q53GI3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
ZNF394Q53GI3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.77□□□□□ -2.13
ZNF394Q53GI3 SNORA32-201ENST00000384072 121 ntBASIC1.77□□□□□ -2.13
ZNF394Q53GI3 MT-TF-201ENST00000387314 71 ntBASIC1.77□□□□□ -2.13
ZNF394Q53GI3 SNORA70.22-201ENST00000517160 124 ntBASIC1.77□□□□□ -2.13
ZNF394Q53GI3 FAM71BP1-201ENST00000604431 523 ntBASIC1.77□□□□□ -2.13
ZNF394Q53GI3 MIR502-201ENST00000606349 86 ntBASIC1.77□□□□□ -2.13
ZNF394Q53GI3 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 RNU6-910P-201ENST00000390844 107 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 MIR1912-201ENST00000410389 80 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 AC063976.4-201ENST00000421971 163 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 RNU7-21P-201ENST00000459430 62 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 SNORD79.1-201ENST00000516069 84 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 RNU7-79P-201ENST00000516082 62 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 RNA5SP458-201ENST00000516188 119 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 AC141846.1-201ENST00000568348 142 ntBASIC1.76□□□□□ -2.13
ZNF394Q53GI3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.76□□□□□ -2.13
ZNF394Q53GI3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ZNF394Q53GI3 Y_RNA.85-201ENST00000363014 111 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 RNU6-654P-201ENST00000364373 107 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 Y_RNA.344-201ENST00000365381 112 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 RNU6-205P-201ENST00000390858 107 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 SNORA75.2-201ENST00000391138 150 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 SNORA75.3-201ENST00000391231 150 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 RNU7-90P-201ENST00000459216 62 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 SNORD13-201ENST00000459299 104 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 MIR6740-201ENST00000618268 113 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 AL162726.3-218ENST00000636401 95 ntBASIC1.75□□□□□ -2.13
ZNF394Q53GI3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ZNF394Q53GI3 RNA5SP99-201ENST00000364020 114 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 SNORD113.3-201ENST00000364630 78 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.74□□□□□ -2.13
ZNF394Q53GI3 SNORD111-201ENST00000408139 94 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms