Protein–RNA interactions for Protein: Q16649

NFIL3, Nuclear factor interleukin-3-regulated protein, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3Q16649 RNU7-121P-201ENST00000516604 62 ntBASIC0.9□□□□□ -2.27
NFIL3Q16649 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
NFIL3Q16649 AL353765.1-201ENST00000605514 183 ntBASIC0.9□□□□□ -2.27
NFIL3Q16649 AC021613.1-201ENST00000623880 111 ntBASIC0.9□□□□□ -2.27
NFIL3Q16649 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
NFIL3Q16649 Y_RNA.52-201ENST00000362760 96 ntBASIC0.89□□□□□ -2.27
NFIL3Q16649 RNU6-682P-201ENST00000363843 106 ntBASIC0.89□□□□□ -2.27
NFIL3Q16649 MIR100-201ENST00000385259 80 ntBASIC0.89□□□□□ -2.27
NFIL3Q16649 MIR548J-201ENST00000408833 112 ntBASIC0.89□□□□□ -2.27
NFIL3Q16649 RNU6-1165P-201ENST00000410119 107 ntBASIC0.89□□□□□ -2.27
NFIL3Q16649 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
NFIL3Q16649 SNORA81.3-201ENST00000517283 198 ntBASIC0.89□□□□□ -2.27
NFIL3Q16649 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
NFIL3Q16649 MIR3646-201ENST00000578301 84 ntBASIC0.89□□□□□ -2.27
NFIL3Q16649 MIR6841-201ENST00000637129 72 ntBASIC0.89□□□□□ -2.27
NFIL3Q16649 SNORA75.5-201ENST00000391291 81 ntBASIC0.88□□□□□ -2.27
NFIL3Q16649 RNU5E-9P-201ENST00000411164 104 ntBASIC0.88□□□□□ -2.27
NFIL3Q16649 RNU6-861P-201ENST00000516745 106 ntBASIC0.88□□□□□ -2.27
NFIL3Q16649 MIR151B-201ENST00000584249 96 ntBASIC0.88□□□□□ -2.27
NFIL3Q16649 AC004792.1-201ENST00000614523 137 ntBASIC0.88□□□□□ -2.27
NFIL3Q16649 MIR6788-201ENST00000618842 66 ntBASIC0.88□□□□□ -2.27
NFIL3Q16649 AC010332.2-201ENST00000613083 1904 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 Y_RNA.441-201ENST00000384123 112 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 SNORA20-201ENST00000384662 132 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 RNU2-64P-201ENST00000411315 191 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 RNA5SP236-201ENST00000516169 116 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.87□□□□□ -2.27
NFIL3Q16649 MIR4771-2-201ENST00000577758 74 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 MIR4771-1-201ENST00000582617 74 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 MIR6515-201ENST00000619843 57 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 MIR6844-201ENST00000637122 62 ntBASIC0.87□□□□□ -2.27
NFIL3Q16649 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
NFIL3Q16649 RNU6-818P-201ENST00000364837 108 ntBASIC0.86□□□□□ -2.27
NFIL3Q16649 RNU6-1318P-201ENST00000365389 103 ntBASIC0.86□□□□□ -2.27
NFIL3Q16649 SNORD99-201ENST00000408612 74 ntBASIC0.86□□□□□ -2.27
NFIL3Q16649 Y_RNA.662-201ENST00000516028 97 ntBASIC0.86□□□□□ -2.27
NFIL3Q16649 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.86□□□□□ -2.27
NFIL3Q16649 AC020891.4-201ENST00000605745 93 ntBASIC0.86□□□□□ -2.27
NFIL3Q16649 MIR30D-201ENST00000362283 70 ntBASIC0.85□□□□□ -2.27
NFIL3Q16649 SNORA22.1-201ENST00000362701 134 ntBASIC0.85□□□□□ -2.27
NFIL3Q16649 MIR605-201ENST00000385078 83 ntBASIC0.85□□□□□ -2.27
NFIL3Q16649 RNU6-1135P-201ENST00000411083 103 ntBASIC0.85□□□□□ -2.27
NFIL3Q16649 AC004941.2-201ENST00000427009 228 ntBASIC0.85□□□□□ -2.27
NFIL3Q16649 RNU6-977P-201ENST00000516411 103 ntBASIC0.85□□□□□ -2.27
NFIL3Q16649 RNU6-1223P-201ENST00000517124 104 ntBASIC0.85□□□□□ -2.27
NFIL3Q16649 MIR4676-201ENST00000583078 72 ntBASIC0.85□□□□□ -2.27
NFIL3Q16649 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
NFIL3Q16649 RNY1P6-201ENST00000384193 109 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 Y_RNA.497-201ENST00000384447 98 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 MT-TF-201ENST00000387314 71 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 AC015818.7-201ENST00000428754 109 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 AC087499.7-201ENST00000441958 109 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 RNU6-893P-201ENST00000458841 100 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 MIR4804-201ENST00000581683 73 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 DNAJC19P2-201ENST00000593340 302 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 AC022709.1-201ENST00000615967 87 ntBASIC0.84□□□□□ -2.27
NFIL3Q16649 RNU6-349P-201ENST00000362402 107 ntBASIC0.83□□□□□ -2.28
NFIL3Q16649 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
NFIL3Q16649 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.83□□□□□ -2.28
NFIL3Q16649 RNU6-588P-201ENST00000410281 105 ntBASIC0.83□□□□□ -2.28
NFIL3Q16649 MTND5P15-201ENST00000434246 349 ntBASIC0.83□□□□□ -2.28
NFIL3Q16649 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.83□□□□□ -2.28
NFIL3Q16649 RNU7-185P-201ENST00000459215 60 ntBASIC0.82□□□□□ -2.28
NFIL3Q16649 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
NFIL3Q16649 MIR3658-201ENST00000636291 56 ntBASIC0.82□□□□□ -2.28
NFIL3Q16649 AC023934.1-201ENST00000574529 2389 ntBASIC0.81□□□□□ -2.28
NFIL3Q16649 RNU4-16P-201ENST00000364737 141 ntBASIC0.81□□□□□ -2.28
NFIL3Q16649 MIR520F-201ENST00000384824 87 ntBASIC0.81□□□□□ -2.28
NFIL3Q16649 AC244098.3-201ENST00000424803 96 ntBASIC0.81□□□□□ -2.28
NFIL3Q16649 RNU7-56P-201ENST00000458744 62 ntBASIC0.81□□□□□ -2.28
NFIL3Q16649 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.81□□□□□ -2.28
NFIL3Q16649 AC104465.1-201ENST00000611365 139 ntBASIC0.81□□□□□ -2.28
NFIL3Q16649 AL662814.1-201ENST00000617364 121 ntBASIC0.81□□□□□ -2.28
NFIL3Q16649 Y_RNA.272-201ENST00000364696 102 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 RNU6-110P-201ENST00000384508 104 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 MIR125B2-201ENST00000385128 89 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 RNU1-119P-201ENST00000391122 165 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 MIR938-201ENST00000401216 83 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 RNA5SP237-201ENST00000410414 113 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 RNU6-182P-201ENST00000516970 105 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 RNU2-60P-201ENST00000517290 128 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 Y_RNA.757-201ENST00000578934 114 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
NFIL3Q16649 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 RNU6-1237P-201ENST00000384777 107 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 MIR520H-201ENST00000385126 88 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 SNORD37.2-201ENST00000391075 66 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 MIR1257-201ENST00000408490 117 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 RNA5SP144-201ENST00000410846 116 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 MTATP6P21-201ENST00000440681 189 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 AC074198.2-201ENST00000508153 258 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 RNA5SP436-201ENST00000516020 115 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 RNU6-1258P-201ENST00000516911 111 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 AC011195.1-201ENST00000578177 177 ntBASIC0.79□□□□□ -2.28
NFIL3Q16649 AC011603.4-201ENST00000611325 277 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms