Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 Y_RNA.437-201ENST00000384113 113 ntBASIC2.32□□□□□ -2.04
SOX4Q06945 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.32□□□□□ -2.04
SOX4Q06945 SNORA31.17-201ENST00000516953 127 ntBASIC2.32□□□□□ -2.04
SOX4Q06945 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.32□□□□□ -2.04
SOX4Q06945 SNORD14A-201ENST00000606526 91 ntBASIC2.32□□□□□ -2.04
SOX4Q06945 AL137847.3-201ENST00000611521 109 ntBASIC2.32□□□□□ -2.04
SOX4Q06945 AC105081.1-201ENST00000617727 106 ntBASIC2.32□□□□□ -2.04
SOX4Q06945 Z82195.2-201ENST00000612348 18351 ntBASIC2.31□□□□□ -2.04
SOX4Q06945 SNORD114-10-201ENST00000363409 72 ntBASIC2.31□□□□□ -2.04
SOX4Q06945 Y_RNA.567-201ENST00000384736 106 ntBASIC2.31□□□□□ -2.04
SOX4Q06945 RNU6-1321P-201ENST00000390905 107 ntBASIC2.31□□□□□ -2.04
SOX4Q06945 MIR548G-201ENST00000408442 89 ntBASIC2.31□□□□□ -2.04
SOX4Q06945 RNU7-137P-201ENST00000516788 62 ntBASIC2.31□□□□□ -2.04
SOX4Q06945 MIR548AO-201ENST00000579992 96 ntBASIC2.31□□□□□ -2.04
SOX4Q06945 RNU6-90P-201ENST00000606352 106 ntBASIC2.31□□□□□ -2.04
SOX4Q06945 AC005336.3-201ENST00000623833 2679 ntBASIC2.31□□□□□ -2.04
SOX4Q06945 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
SOX4Q06945 RNU6-1123P-201ENST00000362347 106 ntBASIC2.3□□□□□ -2.04
SOX4Q06945 SNORD114-1-201ENST00000362705 72 ntBASIC2.3□□□□□ -2.04
SOX4Q06945 Y_RNA.191-201ENST00000363972 113 ntBASIC2.3□□□□□ -2.04
SOX4Q06945 Y_RNA.244-201ENST00000364484 109 ntBASIC2.3□□□□□ -2.04
SOX4Q06945 RNU6-203P-201ENST00000384038 104 ntBASIC2.3□□□□□ -2.04
SOX4Q06945 RNU6-1237P-201ENST00000384777 107 ntBASIC2.3□□□□□ -2.04
SOX4Q06945 MIR1289-2-201ENST00000408360 111 ntBASIC2.3□□□□□ -2.04
SOX4Q06945 Y_RNA.611-201ENST00000410682 108 ntBASIC2.3□□□□□ -2.04
SOX4Q06945 RNA5SP450-201ENST00000411206 102 ntBASIC2.3□□□□□ -2.04
SOX4Q06945 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
SOX4Q06945 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SOX4Q06945 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SOX4Q06945 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.29□□□□□ -2.04
SOX4Q06945 Y_RNA.4-201ENST00000362333 112 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-1125P-201ENST00000363601 107 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-1244P-201ENST00000363614 108 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-279P-201ENST00000391297 101 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-447P-201ENST00000410293 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-1118P-201ENST00000410382 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-1076P-201ENST00000410397 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-355P-201ENST00000410427 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-791P-201ENST00000410467 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-705P-201ENST00000410601 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 Y_RNA.609-201ENST00000410669 89 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-1100P-201ENST00000410691 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-860P-201ENST00000410860 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-1217P-201ENST00000411276 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RNU6-785P-201ENST00000411324 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 RPL31P63-201ENST00000422565 375 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 U6.90-201ENST00000614007 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 U6.70-201ENST00000620287 104 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 MIR219B-201ENST00000637023 88 ntBASIC2.29□□□□□ -2.04
SOX4Q06945 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SOX4Q06945 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
SOX4Q06945 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SOX4Q06945 Y_RNA.98-201ENST00000363109 102 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 RNU6-509P-201ENST00000363519 107 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 SNORD38B-201ENST00000384690 67 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 SPINT5P-201ENST00000448174 155 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 RNU1-98P-201ENST00000458992 160 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.28□□□□□ -2.04
SOX4Q06945 MIR6895-201ENST00000613497 78 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 SNORD38B-202ENST00000625943 69 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 MIR548BB-201ENST00000626714 66 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 MIR4251-201ENST00000635819 61 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 AC006160.2-201ENST00000637708 154 ntBASIC2.28□□□□□ -2.04
SOX4Q06945 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SOX4Q06945 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.05
SOX4Q06945 SNORA3A-201ENST00000364113 130 ntBASIC2.27□□□□□ -2.05
SOX4Q06945 RNU7-48P-201ENST00000458875 63 ntBASIC2.27□□□□□ -2.05
SOX4Q06945 SNORA31.25-201ENST00000517242 134 ntBASIC2.27□□□□□ -2.05
SOX4Q06945 DEFB122-202ENST00000569013 197 ntBASIC2.27□□□□□ -2.05
SOX4Q06945 MIR3935-201ENST00000583472 104 ntBASIC2.27□□□□□ -2.05
SOX4Q06945 AC104984.5-201ENST00000586878 94 ntBASIC2.27□□□□□ -2.05
SOX4Q06945 RNU6-633P-201ENST00000362612 103 ntBASIC2.26□□□□□ -2.05
SOX4Q06945 RNY1P13-201ENST00000365030 105 ntBASIC2.26□□□□□ -2.05
SOX4Q06945 SNORD38.2-201ENST00000384470 69 ntBASIC2.26□□□□□ -2.05
SOX4Q06945 SNORA48.3-201ENST00000391081 134 ntBASIC2.26□□□□□ -2.05
SOX4Q06945 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.26□□□□□ -2.05
SOX4Q06945 AC004965.1-201ENST00000413033 213 ntBASIC2.26□□□□□ -2.05
SOX4Q06945 RNU7-41P-201ENST00000515917 61 ntBASIC2.26□□□□□ -2.05
SOX4Q06945 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
SOX4Q06945 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
SOX4Q06945 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SOX4Q06945 Y_RNA.173-201ENST00000363776 113 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 Y_RNA.221-201ENST00000364248 96 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 RNA5SP138-201ENST00000365098 114 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 SNORA6-201ENST00000384033 151 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 MIR194-1-201ENST00000384892 85 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 MIR653-201ENST00000385279 96 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 RNU6-857P-201ENST00000515893 110 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 RNU6-322P-201ENST00000516010 103 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 AC121758.2-201ENST00000553271 193 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 MTND5P40-201ENST00000559945 246 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 MIR4529-201ENST00000578110 78 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 AC012676.2-201ENST00000619258 186 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.25□□□□□ -2.05
SOX4Q06945 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SOX4Q06945 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms