Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.39□□□□□ -2.63
HIST1H3AP68431 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.39□□□□□ -2.63
HIST1H3AP68431 RNU6-449P-201ENST00000383914 107 ntBASIC-1.39□□□□□ -2.63
HIST1H3AP68431 AC107399.1-201ENST00000451226 265 ntBASIC-1.39□□□□□ -2.63
HIST1H3AP68431 RPS29P25-201ENST00000481709 171 ntBASIC-1.39□□□□□ -2.63
HIST1H3AP68431 MIR5704-201ENST00000584029 77 ntBASIC-1.39□□□□□ -2.63
HIST1H3AP68431 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.39□□□□□ -2.63
HIST1H3AP68431 AC015540.1-201ENST00000615828 501 ntBASIC-1.39□□□□□ -2.63
HIST1H3AP68431 AC069503.3-201ENST00000618674 145 ntBASIC-1.39□□□□□ -2.63
HIST1H3AP68431 SNORD64-201ENST00000386683 67 ntBASIC-1.4□□□□□ -2.63
HIST1H3AP68431 RNU6-763P-201ENST00000390865 106 ntBASIC-1.4□□□□□ -2.63
HIST1H3AP68431 RNU6-415P-201ENST00000516252 97 ntBASIC-1.4□□□□□ -2.63
HIST1H3AP68431 RNU7-13P-201ENST00000516413 62 ntBASIC-1.4□□□□□ -2.63
HIST1H3AP68431 AC145350.1-201ENST00000567426 208 ntBASIC-1.4□□□□□ -2.63
HIST1H3AP68431 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
HIST1H3AP68431 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.41□□□□□ -2.64
HIST1H3AP68431 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.41□□□□□ -2.64
HIST1H3AP68431 TRAJ51-201ENST00000504127 63 ntBASIC-1.41□□□□□ -2.64
HIST1H3AP68431 MTCO2P24-201ENST00000515611 426 ntBASIC-1.41□□□□□ -2.64
HIST1H3AP68431 RNA5SP470-201ENST00000516463 106 ntBASIC-1.41□□□□□ -2.64
HIST1H3AP68431 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.41□□□□□ -2.64
HIST1H3AP68431 AC109635.3-201ENST00000529536 185 ntBASIC-1.41□□□□□ -2.64
HIST1H3AP68431 MIR378F-201ENST00000578143 78 ntBASIC-1.41□□□□□ -2.64
HIST1H3AP68431 RNU6-431P-201ENST00000383874 107 ntBASIC-1.42□□□□□ -2.64
HIST1H3AP68431 AC097635.1-201ENST00000450678 155 ntBASIC-1.42□□□□□ -2.64
HIST1H3AP68431 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.42□□□□□ -2.64
HIST1H3AP68431 RNU7-55P-201ENST00000459426 62 ntBASIC-1.42□□□□□ -2.64
HIST1H3AP68431 RN7SKP299-201ENST00000606679 301 ntBASIC-1.42□□□□□ -2.64
HIST1H3AP68431 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.42□□□□□ -2.64
HIST1H3AP68431 AC098479.1-201ENST00000609225 154 ntBASIC-1.42□□□□□ -2.64
HIST1H3AP68431 MIR376A2-201ENST00000636782 80 ntBASIC-1.42□□□□□ -2.64
HIST1H3AP68431 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.43□□□□□ -2.64
HIST1H3AP68431 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.43□□□□□ -2.64
HIST1H3AP68431 RNY4P3-201ENST00000365254 95 ntBASIC-1.43□□□□□ -2.64
HIST1H3AP68431 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.43□□□□□ -2.64
HIST1H3AP68431 AC098614.3-201ENST00000438957 440 ntBASIC-1.43□□□□□ -2.64
HIST1H3AP68431 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.43□□□□□ -2.64
HIST1H3AP68431 RNU6-911P-201ENST00000516523 104 ntBASIC-1.43□□□□□ -2.64
HIST1H3AP68431 AC011603.4-201ENST00000611325 277 ntBASIC-1.43□□□□□ -2.64
HIST1H3AP68431 Z99129.1-201ENST00000612510 255 ntBASIC-1.43□□□□□ -2.64
HIST1H3AP68431 AL669831.3-213ENST00000636676 183 ntBASIC-1.43□□□□□ -2.64
HIST1H3AP68431 RNY3-201ENST00000365484 102 ntBASIC-1.44□□□□□ -2.64
HIST1H3AP68431 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.44□□□□□ -2.64
HIST1H3AP68431 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.44□□□□□ -2.64
HIST1H3AP68431 SCARNA18B-201ENST00000458806 135 ntBASIC-1.44□□□□□ -2.64
HIST1H3AP68431 RNU7-35P-201ENST00000517174 62 ntBASIC-1.44□□□□□ -2.64
HIST1H3AP68431 MTND5P40-201ENST00000559945 246 ntBASIC-1.44□□□□□ -2.64
HIST1H3AP68431 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.44□□□□□ -2.64
HIST1H3AP68431 AC145423.2-201ENST00000610631 239 ntBASIC-1.44□□□□□ -2.64
HIST1H3AP68431 AC013791.1-201ENST00000616619 62 ntBASIC-1.44□□□□□ -2.64
HIST1H3AP68431 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 MIR519E-201ENST00000385075 84 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 AC016907.1-201ENST00000419483 435 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.45□□□□□ -2.64
HIST1H3AP68431 RNU6-893P-201ENST00000458841 100 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 RNU6-191P-201ENST00000516295 94 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 RNU7-70P-201ENST00000516941 66 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 U4.1-201ENST00000620349 87 ntBASIC-1.45□□□□□ -2.64
HIST1H3AP68431 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.46□□□□□ -2.64
HIST1H3AP68431 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.46□□□□□ -2.64
HIST1H3AP68431 RNU6-429P-201ENST00000384582 108 ntBASIC-1.46□□□□□ -2.64
HIST1H3AP68431 AC096644.2-201ENST00000429278 159 ntBASIC-1.46□□□□□ -2.64
HIST1H3AP68431 AC093423.1-201ENST00000440817 142 ntBASIC-1.46□□□□□ -2.64
HIST1H3AP68431 MIR4460-201ENST00000577862 86 ntBASIC-1.46□□□□□ -2.64
HIST1H3AP68431 MIR548AG2-201ENST00000581228 64 ntBASIC-1.46□□□□□ -2.64
HIST1H3AP68431 MIR5197-201ENST00000583721 112 ntBASIC-1.46□□□□□ -2.64
HIST1H3AP68431 MIR8068-201ENST00000618032 68 ntBASIC-1.46□□□□□ -2.64
HIST1H3AP68431 MIR20A-201ENST00000362279 71 ntBASIC-1.47□□□□□ -2.64
HIST1H3AP68431 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.47□□□□□ -2.64
HIST1H3AP68431 SNORA49-201ENST00000386157 136 ntBASIC-1.47□□□□□ -2.64
HIST1H3AP68431 RNA5SP33-201ENST00000516687 98 ntBASIC-1.47□□□□□ -2.64
HIST1H3AP68431 SNORD115-25-201ENST00000362619 82 ntBASIC-1.48□□□□□ -2.65
HIST1H3AP68431 RNU4-16P-201ENST00000364737 141 ntBASIC-1.48□□□□□ -2.65
HIST1H3AP68431 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.48□□□□□ -2.65
HIST1H3AP68431 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.48□□□□□ -2.65
HIST1H3AP68431 RNU6-937P-201ENST00000384325 106 ntBASIC-1.48□□□□□ -2.65
HIST1H3AP68431 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.48□□□□□ -2.65
HIST1H3AP68431 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.48□□□□□ -2.65
HIST1H3AP68431 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.48□□□□□ -2.65
HIST1H3AP68431 MIR382-201ENST00000637119 76 ntBASIC-1.48□□□□□ -2.65
HIST1H3AP68431 SNORD115-35-201ENST00000365122 82 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 SNORA53-201ENST00000391141 249 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 MTND1P1-201ENST00000445453 368 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 snoU13.19-201ENST00000459148 104 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 RNU6-314P-201ENST00000516574 104 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 RNA5SP476-201ENST00000516613 103 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.49□□□□□ -2.65
HIST1H3AP68431 AC024909.2-201ENST00000553035 286 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 MIR4324-201ENST00000584846 72 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 AC138305.3-201ENST00000624988 240 ntBASIC-1.49□□□□□ -2.65
HIST1H3AP68431 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.5□□□□□ -2.65
HIST1H3AP68431 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.5□□□□□ -2.65
HIST1H3AP68431 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.5□□□□□ -2.65
HIST1H3AP68431 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 250.2 ms