Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MIR4764-201ENST00000580680 88 ntBASIC1.54□□□□□ -2.16
MMP13P45452 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
MMP13P45452 AL162726.3-218ENST00000636401 95 ntBASIC1.54□□□□□ -2.16
MMP13P45452 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MMP13P45452 SNORD115-19-201ENST00000363098 82 ntBASIC1.53□□□□□ -2.16
MMP13P45452 SNORD115-18-201ENST00000363293 82 ntBASIC1.53□□□□□ -2.16
MMP13P45452 SNORD115-17-201ENST00000364612 82 ntBASIC1.53□□□□□ -2.16
MMP13P45452 MIR488-201ENST00000365739 83 ntBASIC1.53□□□□□ -2.16
MMP13P45452 RNU6-342P-201ENST00000384521 104 ntBASIC1.53□□□□□ -2.16
MMP13P45452 Y_RNA.537-201ENST00000384626 109 ntBASIC1.53□□□□□ -2.16
MMP13P45452 RNU7-113P-201ENST00000459273 62 ntBASIC1.53□□□□□ -2.16
MMP13P45452 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
MMP13P45452 Y_RNA.677-201ENST00000516401 85 ntBASIC1.53□□□□□ -2.16
MMP13P45452 RNA5SP61-201ENST00000516453 100 ntBASIC1.53□□□□□ -2.16
MMP13P45452 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.53□□□□□ -2.16
MMP13P45452 MIR4422-201ENST00000581938 83 ntBASIC1.53□□□□□ -2.16
MMP13P45452 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.53□□□□□ -2.16
MMP13P45452 MIR8065-201ENST00000620577 100 ntBASIC1.53□□□□□ -2.16
MMP13P45452 AC008133.2-201ENST00000624540 351 ntBASIC1.53□□□□□ -2.16
MMP13P45452 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
MMP13P45452 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
MMP13P45452 RNU6-60P-201ENST00000364792 103 ntBASIC1.52□□□□□ -2.17
MMP13P45452 MIR605-201ENST00000385078 83 ntBASIC1.52□□□□□ -2.17
MMP13P45452 RNU6-816P-201ENST00000390914 107 ntBASIC1.52□□□□□ -2.17
MMP13P45452 RNU6-1307P-201ENST00000391012 103 ntBASIC1.52□□□□□ -2.17
MMP13P45452 RNU6-1268P-201ENST00000391214 107 ntBASIC1.52□□□□□ -2.17
MMP13P45452 RNU6-1239P-201ENST00000391310 107 ntBASIC1.52□□□□□ -2.17
MMP13P45452 snoU13.9-201ENST00000458927 103 ntBASIC1.52□□□□□ -2.17
MMP13P45452 AC107297.1-201ENST00000459991 176 ntBASIC1.52□□□□□ -2.17
MMP13P45452 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
MMP13P45452 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
MMP13P45452 MIR3192-201ENST00000584920 77 ntBASIC1.52□□□□□ -2.17
MMP13P45452 AL353997.5-201ENST00000618886 171 ntBASIC1.52□□□□□ -2.17
MMP13P45452 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
MMP13P45452 Y_RNA.49-201ENST00000362714 112 ntBASIC1.51□□□□□ -2.17
MMP13P45452 SNORA1.1-201ENST00000364671 133 ntBASIC1.51□□□□□ -2.17
MMP13P45452 Y_RNA.430-201ENST00000384081 110 ntBASIC1.51□□□□□ -2.17
MMP13P45452 RNU6-49P-201ENST00000384256 107 ntBASIC1.51□□□□□ -2.17
MMP13P45452 RNU6-616P-201ENST00000384353 107 ntBASIC1.51□□□□□ -2.17
MMP13P45452 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.51□□□□□ -2.17
MMP13P45452 JTBP1-201ENST00000441314 247 ntBASIC1.51□□□□□ -2.17
MMP13P45452 RNU6-904P-201ENST00000516206 101 ntBASIC1.51□□□□□ -2.17
MMP13P45452 RNA5SP33-201ENST00000516687 98 ntBASIC1.51□□□□□ -2.17
MMP13P45452 RNU7-53P-201ENST00000516705 60 ntBASIC1.51□□□□□ -2.17
MMP13P45452 MIR4524B-201ENST00000581569 115 ntBASIC1.51□□□□□ -2.17
MMP13P45452 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.51□□□□□ -2.17
MMP13P45452 AL645939.4-201ENST00000604495 135 ntBASIC1.51□□□□□ -2.17
MMP13P45452 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
MMP13P45452 SNORA32-201ENST00000384072 121 ntBASIC1.5□□□□□ -2.17
MMP13P45452 MIR513A1-201ENST00000385138 129 ntBASIC1.5□□□□□ -2.17
MMP13P45452 RNU6-679P-201ENST00000391003 106 ntBASIC1.5□□□□□ -2.17
MMP13P45452 MIR1302-5-201ENST00000408164 150 ntBASIC1.5□□□□□ -2.17
MMP13P45452 MIR1302-7-201ENST00000408841 72 ntBASIC1.5□□□□□ -2.17
MMP13P45452 RNY4P30-201ENST00000410216 95 ntBASIC1.5□□□□□ -2.17
MMP13P45452 RNU4-69P-201ENST00000410677 143 ntBASIC1.5□□□□□ -2.17
MMP13P45452 RNU6-602P-201ENST00000411155 105 ntBASIC1.5□□□□□ -2.17
MMP13P45452 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
MMP13P45452 RNU6-922P-201ENST00000516753 99 ntBASIC1.5□□□□□ -2.17
MMP13P45452 AC141557.1-201ENST00000540982 400 ntBASIC1.5□□□□□ -2.17
MMP13P45452 DNAJC19P9-201ENST00000555084 351 ntBASIC1.5□□□□□ -2.17
MMP13P45452 AC015688.6-201ENST00000577737 104 ntBASIC1.5□□□□□ -2.17
MMP13P45452 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
MMP13P45452 RNA5SP259-201ENST00000365541 109 ntBASIC1.49□□□□□ -2.17
MMP13P45452 SNORA70.7-201ENST00000384159 133 ntBASIC1.49□□□□□ -2.17
MMP13P45452 MIR520C-201ENST00000385005 87 ntBASIC1.49□□□□□ -2.17
MMP13P45452 MIR577-201ENST00000385196 96 ntBASIC1.49□□□□□ -2.17
MMP13P45452 MIR759-201ENST00000390224 91 ntBASIC1.49□□□□□ -2.17
MMP13P45452 SNORA17.3-201ENST00000391159 129 ntBASIC1.49□□□□□ -2.17
MMP13P45452 RPL39P25-201ENST00000449384 154 ntBASIC1.49□□□□□ -2.17
MMP13P45452 snoU13.16-201ENST00000459350 104 ntBASIC1.49□□□□□ -2.17
MMP13P45452 RNU7-43P-201ENST00000516554 64 ntBASIC1.49□□□□□ -2.17
MMP13P45452 MIR548Z-201ENST00000584743 97 ntBASIC1.49□□□□□ -2.17
MMP13P45452 AP000942.3-201ENST00000603702 160 ntBASIC1.49□□□□□ -2.17
MMP13P45452 AL096861.1-201ENST00000610899 123 ntBASIC1.49□□□□□ -2.17
MMP13P45452 Z97988.1-201ENST00000637697 135 ntBASIC1.49□□□□□ -2.17
MMP13P45452 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
MMP13P45452 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
MMP13P45452 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
MMP13P45452 RNU6-363P-201ENST00000362895 105 ntBASIC1.48□□□□□ -2.17
MMP13P45452 RNU6-1099P-201ENST00000363533 107 ntBASIC1.48□□□□□ -2.17
MMP13P45452 RNA5SP99-201ENST00000364020 114 ntBASIC1.48□□□□□ -2.17
MMP13P45452 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.48□□□□□ -2.17
MMP13P45452 AC009474.2-201ENST00000451383 136 ntBASIC1.48□□□□□ -2.17
MMP13P45452 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.48□□□□□ -2.17
MMP13P45452 AC091304.10-201ENST00000641554 121 ntBASIC1.48□□□□□ -2.17
MMP13P45452 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
MMP13P45452 RNU4-67P-201ENST00000364569 141 ntBASIC1.47□□□□□ -2.17
MMP13P45452 RNU6-1131P-201ENST00000364955 107 ntBASIC1.47□□□□□ -2.17
MMP13P45452 Y_RNA.360-201ENST00000365512 102 ntBASIC1.47□□□□□ -2.17
MMP13P45452 RPS3AP1-201ENST00000413190 320 ntBASIC1.47□□□□□ -2.17
MMP13P45452 AC245517.4-201ENST00000448601 281 ntBASIC1.47□□□□□ -2.17
MMP13P45452 RNU6-970P-201ENST00000516312 107 ntBASIC1.47□□□□□ -2.17
MMP13P45452 Y_RNA.694-201ENST00000516677 117 ntBASIC1.47□□□□□ -2.17
MMP13P45452 MIR3152-201ENST00000579801 74 ntBASIC1.47□□□□□ -2.17
MMP13P45452 MIR4251-201ENST00000635819 61 ntBASIC1.47□□□□□ -2.17
MMP13P45452 MIR302D-201ENST00000362275 68 ntBASIC1.46□□□□□ -2.18
MMP13P45452 Y_RNA.466-201ENST00000384294 113 ntBASIC1.46□□□□□ -2.18
MMP13P45452 RNY1P7-201ENST00000384743 110 ntBASIC1.46□□□□□ -2.18
MMP13P45452 RNU1-78P-201ENST00000391248 165 ntBASIC1.46□□□□□ -2.18
MMP13P45452 SNORA7.5-201ENST00000410672 110 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms