Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Y_RNA.29-201ENST00000362570 113 ntBASIC0.77□□□□□ -2.29
CDH3P22223 Y_RNA.52-201ENST00000362760 96 ntBASIC0.77□□□□□ -2.29
CDH3P22223 RNU4-84P-201ENST00000364200 139 ntBASIC0.77□□□□□ -2.29
CDH3P22223 RNU1-133P-201ENST00000364867 167 ntBASIC0.77□□□□□ -2.29
CDH3P22223 Y_RNA.337-201ENST00000365312 102 ntBASIC0.77□□□□□ -2.29
CDH3P22223 MIR588-201ENST00000384900 83 ntBASIC0.77□□□□□ -2.29
CDH3P22223 MIR563-201ENST00000385080 79 ntBASIC0.77□□□□□ -2.29
CDH3P22223 AC015818.7-201ENST00000428754 109 ntBASIC0.77□□□□□ -2.29
CDH3P22223 AC087499.7-201ENST00000441958 109 ntBASIC0.77□□□□□ -2.29
CDH3P22223 snoU13.2-201ENST00000459201 104 ntBASIC0.77□□□□□ -2.29
CDH3P22223 Y_RNA.700-201ENST00000516806 100 ntBASIC0.77□□□□□ -2.29
CDH3P22223 MIR6841-201ENST00000637129 72 ntBASIC0.77□□□□□ -2.29
CDH3P22223 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
CDH3P22223 AC010332.2-201ENST00000613083 1904 ntBASIC0.76□□□□□ -2.29
CDH3P22223 RNU6-934P-201ENST00000365154 107 ntBASIC0.76□□□□□ -2.29
CDH3P22223 Y_RNA.430-201ENST00000384081 110 ntBASIC0.76□□□□□ -2.29
CDH3P22223 Y_RNA.785-201ENST00000384290 109 ntBASIC0.76□□□□□ -2.29
CDH3P22223 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
CDH3P22223 RNU6-239P-201ENST00000390990 99 ntBASIC0.76□□□□□ -2.29
CDH3P22223 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.76□□□□□ -2.29
CDH3P22223 RNU6-1165P-201ENST00000410119 107 ntBASIC0.76□□□□□ -2.29
CDH3P22223 RPS26P5-201ENST00000418544 335 ntBASIC0.76□□□□□ -2.29
CDH3P22223 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
CDH3P22223 AC004941.2-201ENST00000427009 228 ntBASIC0.76□□□□□ -2.29
CDH3P22223 RNU7-70P-201ENST00000516941 66 ntBASIC0.76□□□□□ -2.29
CDH3P22223 SNORA81.3-201ENST00000517283 198 ntBASIC0.76□□□□□ -2.29
CDH3P22223 AL353765.1-201ENST00000605514 183 ntBASIC0.76□□□□□ -2.29
CDH3P22223 RMST_2.1-201ENST00000617263 136 ntBASIC0.76□□□□□ -2.29
CDH3P22223 AC021613.1-201ENST00000623880 111 ntBASIC0.76□□□□□ -2.29
CDH3P22223 MIR1-1-201ENST00000362147 71 ntBASIC0.75□□□□□ -2.29
CDH3P22223 SNORA75.5-201ENST00000391291 81 ntBASIC0.75□□□□□ -2.29
CDH3P22223 RNA5SP261-201ENST00000410536 106 ntBASIC0.75□□□□□ -2.29
CDH3P22223 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
CDH3P22223 RNA5SP236-201ENST00000516169 116 ntBASIC0.75□□□□□ -2.29
CDH3P22223 RNU7-121P-201ENST00000516604 62 ntBASIC0.75□□□□□ -2.29
CDH3P22223 MIR4771-2-201ENST00000577758 74 ntBASIC0.75□□□□□ -2.29
CDH3P22223 MIR4771-1-201ENST00000582617 74 ntBASIC0.75□□□□□ -2.29
CDH3P22223 AC004792.1-201ENST00000614523 137 ntBASIC0.75□□□□□ -2.29
CDH3P22223 MIR3658-201ENST00000636291 56 ntBASIC0.75□□□□□ -2.29
CDH3P22223 RNU4-16P-201ENST00000364737 141 ntBASIC0.74□□□□□ -2.29
CDH3P22223 Y_RNA.357-201ENST00000365487 109 ntBASIC0.74□□□□□ -2.29
CDH3P22223 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.74□□□□□ -2.29
CDH3P22223 AC113410.1-201ENST00000505029 247 ntBASIC0.74□□□□□ -2.29
CDH3P22223 AC025627.3-201ENST00000582078 182 ntBASIC0.74□□□□□ -2.29
CDH3P22223 AC020891.4-201ENST00000605745 93 ntBASIC0.74□□□□□ -2.29
CDH3P22223 AL136317.1-201ENST00000612653 226 ntBASIC0.74□□□□□ -2.29
CDH3P22223 MIR30D-201ENST00000362283 70 ntBASIC0.73□□□□□ -2.29
CDH3P22223 RNY1P11-201ENST00000363759 113 ntBASIC0.73□□□□□ -2.29
CDH3P22223 Y_RNA.354-201ENST00000365448 111 ntBASIC0.73□□□□□ -2.29
CDH3P22223 Y_RNA.441-201ENST00000384123 112 ntBASIC0.73□□□□□ -2.29
CDH3P22223 SNORD105-201ENST00000386910 85 ntBASIC0.73□□□□□ -2.29
CDH3P22223 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CDH3P22223 SNORD99-201ENST00000408612 74 ntBASIC0.73□□□□□ -2.29
CDH3P22223 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
CDH3P22223 MIR18B-201ENST00000454574 71 ntBASIC0.73□□□□□ -2.29
CDH3P22223 AC074198.2-201ENST00000508153 258 ntBASIC0.73□□□□□ -2.29
CDH3P22223 Y_RNA.662-201ENST00000516028 97 ntBASIC0.73□□□□□ -2.29
CDH3P22223 MIR3646-201ENST00000578301 84 ntBASIC0.73□□□□□ -2.29
CDH3P22223 MIR3152-201ENST00000579801 74 ntBASIC0.73□□□□□ -2.29
CDH3P22223 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
CDH3P22223 SNORA22.1-201ENST00000362701 134 ntBASIC0.72□□□□□ -2.29
CDH3P22223 RNU6-818P-201ENST00000364837 108 ntBASIC0.72□□□□□ -2.29
CDH3P22223 Y_RNA.497-201ENST00000384447 98 ntBASIC0.72□□□□□ -2.29
CDH3P22223 SNORA20-201ENST00000384662 132 ntBASIC0.72□□□□□ -2.29
CDH3P22223 MIR598-201ENST00000384868 97 ntBASIC0.72□□□□□ -2.29
CDH3P22223 MIR489-201ENST00000384923 84 ntBASIC0.72□□□□□ -2.29
CDH3P22223 RNU6-588P-201ENST00000410281 105 ntBASIC0.72□□□□□ -2.29
CDH3P22223 RNU2-60P-201ENST00000517290 128 ntBASIC0.72□□□□□ -2.29
CDH3P22223 MIR4676-201ENST00000583078 72 ntBASIC0.72□□□□□ -2.29
CDH3P22223 MIR6515-201ENST00000619843 57 ntBASIC0.72□□□□□ -2.29
CDH3P22223 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.72□□□□□ -2.29
CDH3P22223 MIR6844-201ENST00000637122 62 ntBASIC0.72□□□□□ -2.29
CDH3P22223 AC023934.1-201ENST00000574529 2389 ntBASIC0.71□□□□□ -2.3
CDH3P22223 RNU6-349P-201ENST00000362402 107 ntBASIC0.71□□□□□ -2.3
CDH3P22223 RNY1P6-201ENST00000384193 109 ntBASIC0.71□□□□□ -2.3
CDH3P22223 RNU6-342P-201ENST00000384521 104 ntBASIC0.71□□□□□ -2.3
CDH3P22223 AC133485.1-201ENST00000567176 124 ntBASIC0.71□□□□□ -2.3
CDH3P22223 AC138907.6-201ENST00000568401 126 ntBASIC0.71□□□□□ -2.3
CDH3P22223 MIR5000-201ENST00000577717 103 ntBASIC0.71□□□□□ -2.3
CDH3P22223 MIR4804-201ENST00000581683 73 ntBASIC0.71□□□□□ -2.3
CDH3P22223 Y_RNA.272-201ENST00000364696 102 ntBASIC0.7□□□□□ -2.3
CDH3P22223 RNU6-1318P-201ENST00000365389 103 ntBASIC0.7□□□□□ -2.3
CDH3P22223 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
CDH3P22223 MT-TF-201ENST00000387314 71 ntBASIC0.7□□□□□ -2.3
CDH3P22223 RNU6-1135P-201ENST00000411083 103 ntBASIC0.7□□□□□ -2.3
CDH3P22223 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
CDH3P22223 RNU6-977P-201ENST00000516411 103 ntBASIC0.7□□□□□ -2.3
CDH3P22223 RNU6-1258P-201ENST00000516911 111 ntBASIC0.7□□□□□ -2.3
CDH3P22223 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.7□□□□□ -2.3
CDH3P22223 DNAJC19P2-201ENST00000593340 302 ntBASIC0.7□□□□□ -2.3
CDH3P22223 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.7□□□□□ -2.3
CDH3P22223 AC022709.1-201ENST00000615967 87 ntBASIC0.7□□□□□ -2.3
CDH3P22223 AL662814.1-201ENST00000617364 121 ntBASIC0.7□□□□□ -2.3
CDH3P22223 SNORD114-26-201ENST00000363543 72 ntBASIC0.69□□□□□ -2.3
CDH3P22223 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CDH3P22223 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
CDH3P22223 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.69□□□□□ -2.3
CDH3P22223 RNU7-185P-201ENST00000459215 60 ntBASIC0.69□□□□□ -2.3
CDH3P22223 Y_RNA.757-201ENST00000578934 114 ntBASIC0.69□□□□□ -2.3
CDH3P22223 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms