Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 RNU6-379P-201ENST00000363813 104 ntBASIC0.84□□□□□ -2.27
ACTN1P12814 MIR588-201ENST00000384900 83 ntBASIC0.84□□□□□ -2.27
ACTN1P12814 MIR1827-201ENST00000408549 66 ntBASIC0.84□□□□□ -2.27
ACTN1P12814 RNA5SP127-201ENST00000411051 133 ntBASIC0.84□□□□□ -2.27
ACTN1P12814 RNU7-80P-201ENST00000459562 61 ntBASIC0.84□□□□□ -2.27
ACTN1P12814 RNU6-1219P-201ENST00000516143 112 ntBASIC0.84□□□□□ -2.27
ACTN1P12814 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.84□□□□□ -2.27
ACTN1P12814 Z83818.1-201ENST00000603584 150 ntBASIC0.84□□□□□ -2.27
ACTN1P12814 Y_RNA.75-201ENST00000362927 97 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 RNA5SP457-201ENST00000363657 124 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 SNORA25.7-201ENST00000364375 127 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 Y_RNA.297-201ENST00000364950 91 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 RNU6-580P-201ENST00000365159 107 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 Y_RNA.515-201ENST00000384535 112 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 MIR608-201ENST00000384820 100 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 RNU6-1110P-201ENST00000516462 101 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 RNU6-1149P-201ENST00000516810 97 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 AL136317.1-201ENST00000612653 226 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 MIR6717-201ENST00000622747 73 ntBASIC0.83□□□□□ -2.28
ACTN1P12814 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
ACTN1P12814 RNU4-16P-201ENST00000364737 141 ntBASIC0.82□□□□□ -2.28
ACTN1P12814 Y_RNA.454-201ENST00000384224 113 ntBASIC0.82□□□□□ -2.28
ACTN1P12814 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
ACTN1P12814 RNU6-977P-201ENST00000516411 103 ntBASIC0.82□□□□□ -2.28
ACTN1P12814 MRPS18CP4-201ENST00000535821 231 ntBASIC0.82□□□□□ -2.28
ACTN1P12814 AL353765.1-201ENST00000605514 183 ntBASIC0.82□□□□□ -2.28
ACTN1P12814 MIR924-201ENST00000638017 53 ntBASIC0.82□□□□□ -2.28
ACTN1P12814 Y_RNA.30-201ENST00000362572 97 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 Y_RNA.233-201ENST00000364407 101 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 RNU6-597P-201ENST00000365620 102 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 Y_RNA.476-201ENST00000384347 108 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 RNU6-1237P-201ENST00000384777 107 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 MIR520F-201ENST00000384824 87 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 SNORA26.6-201ENST00000391256 115 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 RNU6-1165P-201ENST00000410119 107 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 RPS26P5-201ENST00000418544 335 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 MIR4431-201ENST00000579990 94 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 AC025627.3-201ENST00000582078 182 ntBASIC0.81□□□□□ -2.28
ACTN1P12814 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
ACTN1P12814 RNA5SP347-201ENST00000362445 119 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 RNU6-369P-201ENST00000362515 102 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 RNU6-768P-201ENST00000384683 107 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 Y_RNA.793-201ENST00000411222 111 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 Y_RNA.644-201ENST00000459006 113 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 AC113410.1-201ENST00000505029 247 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 Y_RNA.674-201ENST00000516362 113 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 AC011195.1-201ENST00000578177 177 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 MTND5P32-201ENST00000560711 1802 ntBASIC0.8□□□□□ -2.28
ACTN1P12814 Y_RNA.435-201ENST00000384095 112 ntBASIC0.79□□□□□ -2.28
ACTN1P12814 SNORA20-201ENST00000384662 132 ntBASIC0.79□□□□□ -2.28
ACTN1P12814 Y_RNA.552-201ENST00000384665 112 ntBASIC0.79□□□□□ -2.28
ACTN1P12814 MIR624-201ENST00000385217 97 ntBASIC0.79□□□□□ -2.28
ACTN1P12814 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.79□□□□□ -2.28
ACTN1P12814 snoU13.2-201ENST00000459201 104 ntBASIC0.79□□□□□ -2.28
ACTN1P12814 SCARNA15-202ENST00000516881 127 ntBASIC0.79□□□□□ -2.28
ACTN1P12814 AC020891.4-201ENST00000605745 93 ntBASIC0.79□□□□□ -2.28
ACTN1P12814 AC141273.2-201ENST00000618989 130 ntBASIC0.79□□□□□ -2.28
ACTN1P12814 MIR520H-201ENST00000385126 88 ntBASIC0.78□□□□□ -2.28
ACTN1P12814 RNA5SP261-201ENST00000410536 106 ntBASIC0.78□□□□□ -2.28
ACTN1P12814 AC107027.2-201ENST00000512197 115 ntBASIC0.78□□□□□ -2.28
ACTN1P12814 AP002392.1-201ENST00000537692 208 ntBASIC0.78□□□□□ -2.28
ACTN1P12814 MIR4676-201ENST00000583078 72 ntBASIC0.78□□□□□ -2.28
ACTN1P12814 AC104465.1-201ENST00000611365 139 ntBASIC0.78□□□□□ -2.28
ACTN1P12814 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
ACTN1P12814 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
ACTN1P12814 Y_RNA.115-201ENST00000363272 98 ntBASIC0.77□□□□□ -2.29
ACTN1P12814 RNU6-1082P-201ENST00000364574 107 ntBASIC0.77□□□□□ -2.29
ACTN1P12814 RNU6-138P-201ENST00000515952 107 ntBASIC0.77□□□□□ -2.29
ACTN1P12814 MIR3152-201ENST00000579801 74 ntBASIC0.77□□□□□ -2.29
ACTN1P12814 AC021613.1-201ENST00000623880 111 ntBASIC0.77□□□□□ -2.29
ACTN1P12814 AL589743.1-201ENST00000551932 2712 ntBASIC0.77□□□□□ -2.29
ACTN1P12814 RNU6-1319P-201ENST00000390855 104 ntBASIC0.76□□□□□ -2.29
ACTN1P12814 RNU6-747P-201ENST00000390928 104 ntBASIC0.76□□□□□ -2.29
ACTN1P12814 RNU6-241P-201ENST00000391148 104 ntBASIC0.76□□□□□ -2.29
ACTN1P12814 RNU6-177P-201ENST00000411257 104 ntBASIC0.76□□□□□ -2.29
ACTN1P12814 SNORA22.1-201ENST00000362701 134 ntBASIC0.75□□□□□ -2.29
ACTN1P12814 Y_RNA.52-201ENST00000362760 96 ntBASIC0.75□□□□□ -2.29
ACTN1P12814 RNU6-312P-201ENST00000364629 107 ntBASIC0.75□□□□□ -2.29
ACTN1P12814 RNA5SP237-201ENST00000410414 113 ntBASIC0.75□□□□□ -2.29
ACTN1P12814 RNA5SP222-201ENST00000411039 105 ntBASIC0.75□□□□□ -2.29
ACTN1P12814 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.75□□□□□ -2.29
ACTN1P12814 AC004812.1-201ENST00000540773 146 ntBASIC0.75□□□□□ -2.29
ACTN1P12814 MIR4711-201ENST00000578274 70 ntBASIC0.75□□□□□ -2.29
ACTN1P12814 MIR4804-201ENST00000581683 73 ntBASIC0.75□□□□□ -2.29
ACTN1P12814 RNU6-200P-201ENST00000364743 107 ntBASIC0.74□□□□□ -2.29
ACTN1P12814 Y_RNA.337-201ENST00000365312 102 ntBASIC0.74□□□□□ -2.29
ACTN1P12814 Y_RNA.357-201ENST00000365487 109 ntBASIC0.74□□□□□ -2.29
ACTN1P12814 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
ACTN1P12814 RNU1-119P-201ENST00000391122 165 ntBASIC0.74□□□□□ -2.29
ACTN1P12814 MIR1257-201ENST00000408490 117 ntBASIC0.74□□□□□ -2.29
ACTN1P12814 AC244098.3-201ENST00000424803 96 ntBASIC0.74□□□□□ -2.29
ACTN1P12814 MTND5P15-201ENST00000434246 349 ntBASIC0.74□□□□□ -2.29
ACTN1P12814 RPL39P25-201ENST00000449384 154 ntBASIC0.74□□□□□ -2.29
ACTN1P12814 MIR18B-201ENST00000454574 71 ntBASIC0.74□□□□□ -2.29
ACTN1P12814 RNU7-185P-201ENST00000459215 60 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 264.6 ms