Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL020996.3-201ENST00000606617 222 ntBASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 DNAJC19P9-201ENST00000555084 351 ntBASIC2.91□□□□□ -1.94
CSB-PGBD3P0DP91 MIR548AR-201ENST00000582191 57 ntBASIC2.91□□□□□ -1.94
CSB-PGBD3P0DP91 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.91□□□□□ -1.94
CSB-PGBD3P0DP91 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-509P-201ENST00000363519 107 ntBASIC2.9□□□□□ -1.95
CSB-PGBD3P0DP91 SNORA16B-201ENST00000364674 135 ntBASIC2.9□□□□□ -1.95
CSB-PGBD3P0DP91 MIR660-201ENST00000385235 97 ntBASIC2.9□□□□□ -1.95
CSB-PGBD3P0DP91 HMGN1P33-201ENST00000432945 451 ntBASIC2.9□□□□□ -1.95
CSB-PGBD3P0DP91 AC011753.1-201ENST00000451001 220 ntBASIC2.9□□□□□ -1.95
CSB-PGBD3P0DP91 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.9□□□□□ -1.95
CSB-PGBD3P0DP91 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.9□□□□□ -1.95
CSB-PGBD3P0DP91 SNORD3E-202ENST00000627253 216 ntBASIC2.9□□□□□ -1.95
CSB-PGBD3P0DP91 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CSB-PGBD3P0DP91 Y_RNA.338-201ENST00000365320 114 ntBASIC2.89□□□□□ -1.95
CSB-PGBD3P0DP91 RNU6-342P-201ENST00000384521 104 ntBASIC2.89□□□□□ -1.95
CSB-PGBD3P0DP91 RNU7-2P-201ENST00000516096 62 ntBASIC2.89□□□□□ -1.95
CSB-PGBD3P0DP91 RNA5SP200-201ENST00000516360 103 ntBASIC2.89□□□□□ -1.95
CSB-PGBD3P0DP91 RNU6-826P-201ENST00000516827 104 ntBASIC2.89□□□□□ -1.95
CSB-PGBD3P0DP91 AC019288.1-201ENST00000557918 224 ntBASIC2.89□□□□□ -1.95
CSB-PGBD3P0DP91 AL049779.4-201ENST00000604500 156 ntBASIC2.89□□□□□ -1.95
CSB-PGBD3P0DP91 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CSB-PGBD3P0DP91 MIR206-201ENST00000384872 86 ntBASIC2.88□□□□□ -1.95
CSB-PGBD3P0DP91 MIR452-201ENST00000385020 85 ntBASIC2.88□□□□□ -1.95
CSB-PGBD3P0DP91 MIR136-201ENST00000385207 82 ntBASIC2.88□□□□□ -1.95
CSB-PGBD3P0DP91 U8.13-201ENST00000390842 128 ntBASIC2.88□□□□□ -1.95
CSB-PGBD3P0DP91 RNA5SP212-201ENST00000391223 107 ntBASIC2.88□□□□□ -1.95
CSB-PGBD3P0DP91 Y_RNA.609-201ENST00000410669 89 ntBASIC2.88□□□□□ -1.95
CSB-PGBD3P0DP91 RNU7-73P-201ENST00000458743 63 ntBASIC2.88□□□□□ -1.95
CSB-PGBD3P0DP91 AC243994.1-201ENST00000618627 109 ntBASIC2.88□□□□□ -1.95
CSB-PGBD3P0DP91 Z82195.2-201ENST00000612348 18351 ntBASIC2.87□□□□□ -1.95
CSB-PGBD3P0DP91 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
CSB-PGBD3P0DP91 MIR424-201ENST00000362227 98 ntBASIC2.87□□□□□ -1.95
CSB-PGBD3P0DP91 MIR34C-201ENST00000384831 77 ntBASIC2.87□□□□□ -1.95
CSB-PGBD3P0DP91 MIR526A1-201ENST00000384897 85 ntBASIC2.87□□□□□ -1.95
CSB-PGBD3P0DP91 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.87□□□□□ -1.95
CSB-PGBD3P0DP91 RNA5SP261-201ENST00000410536 106 ntBASIC2.87□□□□□ -1.95
CSB-PGBD3P0DP91 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSB-PGBD3P0DP91 RNU6-633P-201ENST00000362612 103 ntBASIC2.86□□□□□ -1.95
CSB-PGBD3P0DP91 RNU6-776P-201ENST00000364403 104 ntBASIC2.86□□□□□ -1.95
CSB-PGBD3P0DP91 RNU6-1022P-201ENST00000365049 104 ntBASIC2.86□□□□□ -1.95
CSB-PGBD3P0DP91 SNORD123-201ENST00000459473 70 ntBASIC2.86□□□□□ -1.95
CSB-PGBD3P0DP91 SNORD115-27-201ENST00000364430 82 ntBASIC2.85□□□□□ -1.95
CSB-PGBD3P0DP91 SNORA26.9-201ENST00000391322 122 ntBASIC2.85□□□□□ -1.95
CSB-PGBD3P0DP91 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CSB-PGBD3P0DP91 AC005336.3-201ENST00000623833 2679 ntBASIC2.85□□□□□ -1.95
CSB-PGBD3P0DP91 Y_RNA.94-201ENST00000363068 106 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 SNORD38.1-201ENST00000363863 68 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 AL445685.2-201ENST00000422551 342 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 RNA5SP82-201ENST00000516707 92 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 MIR4287-201ENST00000579398 78 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 MIR3670-2-201ENST00000582974 65 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 MIR3670-1-201ENST00000584160 65 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 MIR3670-3-201ENST00000584855 65 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 MIR3670-4-201ENST00000612260 65 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 AL773524.1-201ENST00000614065 229 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 MIR4662A-201ENST00000637499 67 ntBASIC2.84□□□□□ -1.95
CSB-PGBD3P0DP91 RNU6-1244P-201ENST00000363614 108 ntBASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 Y_RNA.164-201ENST00000363709 102 ntBASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 Y_RNA.316-201ENST00000365118 111 ntBASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 MIR889-201ENST00000401280 79 ntBASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 Y_RNA.607-201ENST00000410597 98 ntBASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 RNA5SP247-201ENST00000411181 105 ntBASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 AC020891.4-201ENST00000605745 93 ntBASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 MIR6845-201ENST00000613182 61 ntBASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSB-PGBD3P0DP91 RNU6-1123P-201ENST00000362347 106 ntBASIC2.82□□□□□ -1.96
CSB-PGBD3P0DP91 RNU1-17P-201ENST00000363022 152 ntBASIC2.82□□□□□ -1.96
CSB-PGBD3P0DP91 RNU6-203P-201ENST00000384038 104 ntBASIC2.82□□□□□ -1.96
CSB-PGBD3P0DP91 MIR583-201ENST00000384846 75 ntBASIC2.82□□□□□ -1.96
CSB-PGBD3P0DP91 AC245047.7-201ENST00000440265 293 ntBASIC2.82□□□□□ -1.96
CSB-PGBD3P0DP91 RNU7-35P-201ENST00000517174 62 ntBASIC2.82□□□□□ -1.96
CSB-PGBD3P0DP91 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 AC244636.1-201ENST00000421152 228 ntBASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 RPS29P28-201ENST00000446439 141 ntBASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 AC139453.2-201ENST00000487255 133 ntBASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 SNORD67.1-201ENST00000516618 108 ntBASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 AP000942.3-201ENST00000603702 160 ntBASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 MIR8055-201ENST00000610739 97 ntBASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 Y_RNA.783-201ENST00000613546 102 ntBASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CSB-PGBD3P0DP91 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
CSB-PGBD3P0DP91 AC131280.1-202ENST00000624067 4211 ntBASIC2.8□□□□□ -1.96
CSB-PGBD3P0DP91 SNORA6-201ENST00000384033 151 ntBASIC2.8□□□□□ -1.96
CSB-PGBD3P0DP91 Y_RNA.448-201ENST00000384185 108 ntBASIC2.8□□□□□ -1.96
CSB-PGBD3P0DP91 RNU6-613P-201ENST00000410412 108 ntBASIC2.8□□□□□ -1.96
CSB-PGBD3P0DP91 MIR8065-201ENST00000620577 100 ntBASIC2.8□□□□□ -1.96
CSB-PGBD3P0DP91 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSB-PGBD3P0DP91 RNU6-524P-201ENST00000384270 107 ntBASIC2.79□□□□□ -1.96
CSB-PGBD3P0DP91 Y_RNA.567-201ENST00000384736 106 ntBASIC2.79□□□□□ -1.96
CSB-PGBD3P0DP91 AC019129.1-201ENST00000403786 261 ntBASIC2.79□□□□□ -1.96
CSB-PGBD3P0DP91 RNU1-98P-201ENST00000458992 160 ntBASIC2.79□□□□□ -1.96
CSB-PGBD3P0DP91 AC105081.1-201ENST00000617727 106 ntBASIC2.79□□□□□ -1.96
CSB-PGBD3P0DP91 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CSB-PGBD3P0DP91 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms