Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 U8.20-201ENST00000459445 131 ntBASIC-1.41□□□□□ -2.64
TPM1P09493 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.41□□□□□ -2.64
TPM1P09493 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.41□□□□□ -2.64
TPM1P09493 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.42□□□□□ -2.64
TPM1P09493 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.42□□□□□ -2.64
TPM1P09493 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.42□□□□□ -2.64
TPM1P09493 RNU6-699P-201ENST00000517081 110 ntBASIC-1.42□□□□□ -2.64
TPM1P09493 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 MIR181B2-201ENST00000385004 89 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 PMCHL1-202ENST00000423102 261 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 AC097635.1-201ENST00000450678 155 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 AC103591.3-201ENST00000608684 209 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 AP000770.2-201ENST00000623694 100 ntBASIC-1.43□□□□□ -2.64
TPM1P09493 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 RNU6-429P-201ENST00000384582 108 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 MIR635-201ENST00000384830 98 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 RNU7-70P-201ENST00000516941 66 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 MIR5589-201ENST00000579442 60 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 MIR3920-201ENST00000581751 86 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 MIR4473-201ENST00000583731 91 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 AC133104.2-201ENST00000615272 193 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 uc_338.10-201ENST00000621872 182 ntBASIC-1.44□□□□□ -2.64
TPM1P09493 RNU1-141P-201ENST00000364623 158 ntBASIC-1.45□□□□□ -2.64
TPM1P09493 RNU6-455P-201ENST00000384681 107 ntBASIC-1.45□□□□□ -2.64
TPM1P09493 U4.5-201ENST00000617137 123 ntBASIC-1.45□□□□□ -2.64
TPM1P09493 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.46□□□□□ -2.64
TPM1P09493 AL603914.1-201ENST00000401964 204 ntBASIC-1.46□□□□□ -2.64
TPM1P09493 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.46□□□□□ -2.64
TPM1P09493 MIR3129-201ENST00000581095 76 ntBASIC-1.46□□□□□ -2.64
TPM1P09493 AC006006.1-201ENST00000603082 144 ntBASIC-1.46□□□□□ -2.64
TPM1P09493 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.47□□□□□ -2.64
TPM1P09493 SNORD114-29-201ENST00000364819 70 ntBASIC-1.47□□□□□ -2.64
TPM1P09493 MIR1912-201ENST00000410389 80 ntBASIC-1.47□□□□□ -2.64
TPM1P09493 TRAJ51-201ENST00000504127 63 ntBASIC-1.47□□□□□ -2.64
TPM1P09493 RNU6-507P-201ENST00000516045 100 ntBASIC-1.47□□□□□ -2.64
TPM1P09493 AL138825.1-201ENST00000618587 192 ntBASIC-1.47□□□□□ -2.64
TPM1P09493 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.48□□□□□ -2.65
TPM1P09493 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.48□□□□□ -2.65
TPM1P09493 RNU4-10P-201ENST00000364383 140 ntBASIC-1.48□□□□□ -2.65
TPM1P09493 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.48□□□□□ -2.65
TPM1P09493 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.48□□□□□ -2.65
TPM1P09493 RNU7-137P-201ENST00000516788 62 ntBASIC-1.48□□□□□ -2.65
TPM1P09493 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.48□□□□□ -2.65
TPM1P09493 SNORA53-201ENST00000391141 249 ntBASIC-1.49□□□□□ -2.65
TPM1P09493 RNU7-13P-201ENST00000516413 62 ntBASIC-1.49□□□□□ -2.65
TPM1P09493 SNORD116.3-201ENST00000517176 78 ntBASIC-1.49□□□□□ -2.65
TPM1P09493 AC040926.1-201ENST00000530195 238 ntBASIC-1.49□□□□□ -2.65
TPM1P09493 AC024909.2-201ENST00000553035 286 ntBASIC-1.49□□□□□ -2.65
TPM1P09493 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.5□□□□□ -2.65
TPM1P09493 RNU4-16P-201ENST00000364737 141 ntBASIC-1.5□□□□□ -2.65
TPM1P09493 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.5□□□□□ -2.65
TPM1P09493 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.5□□□□□ -2.65
TPM1P09493 SNORA40.14-201ENST00000516543 86 ntBASIC-1.5□□□□□ -2.65
TPM1P09493 AC069503.3-201ENST00000618674 145 ntBASIC-1.5□□□□□ -2.65
TPM1P09493 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.51□□□□□ -2.65
TPM1P09493 SNORD113-8-201ENST00000363497 74 ntBASIC-1.51□□□□□ -2.65
TPM1P09493 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.51□□□□□ -2.65
TPM1P09493 RNY3P5-201ENST00000384127 102 ntBASIC-1.51□□□□□ -2.65
TPM1P09493 SNRPGP8-201ENST00000454064 226 ntBASIC-1.51□□□□□ -2.65
TPM1P09493 RNU6-175P-201ENST00000516896 107 ntBASIC-1.51□□□□□ -2.65
TPM1P09493 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.51□□□□□ -2.65
TPM1P09493 AC002553.4-201ENST00000616896 331 ntBASIC-1.51□□□□□ -2.65
TPM1P09493 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.52□□□□□ -2.65
TPM1P09493 HSPE1P25-201ENST00000455484 251 ntBASIC-1.52□□□□□ -2.65
TPM1P09493 AC021146.6-201ENST00000514659 117 ntBASIC-1.52□□□□□ -2.65
TPM1P09493 SNORD67.1-201ENST00000516618 108 ntBASIC-1.52□□□□□ -2.65
TPM1P09493 MTND5P40-201ENST00000559945 246 ntBASIC-1.52□□□□□ -2.65
TPM1P09493 SNORD114-10-201ENST00000363409 72 ntBASIC-1.53□□□□□ -2.65
TPM1P09493 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.53□□□□□ -2.65
TPM1P09493 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.53□□□□□ -2.65
TPM1P09493 MIR9-2-201ENST00000384838 87 ntBASIC-1.53□□□□□ -2.65
TPM1P09493 MIR204-201ENST00000385200 110 ntBASIC-1.53□□□□□ -2.65
TPM1P09493 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
TPM1P09493 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
TPM1P09493 AC025253.1-201ENST00000613623 543 ntBASIC-1.53□□□□□ -2.65
TPM1P09493 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.53□□□□□ -2.65
TPM1P09493 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.54□□□□□ -2.66
TPM1P09493 MIR539-201ENST00000365690 78 ntBASIC-1.54□□□□□ -2.66
TPM1P09493 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.54□□□□□ -2.66
TPM1P09493 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.54□□□□□ -2.66
TPM1P09493 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.54□□□□□ -2.66
TPM1P09493 RNU6-130P-201ENST00000411112 103 ntBASIC-1.54□□□□□ -2.66
TPM1P09493 AL731563.1-201ENST00000442202 214 ntBASIC-1.54□□□□□ -2.66
TPM1P09493 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.54□□□□□ -2.66
TPM1P09493 RNU4-90P-201ENST00000362773 141 ntBASIC-1.55□□□□□ -2.66
TPM1P09493 RNU6-102P-201ENST00000384485 104 ntBASIC-1.55□□□□□ -2.66
TPM1P09493 MIR604-201ENST00000384880 94 ntBASIC-1.55□□□□□ -2.66
TPM1P09493 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.55□□□□□ -2.66
TPM1P09493 MIR1277-201ENST00000408536 78 ntBASIC-1.55□□□□□ -2.66
TPM1P09493 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 248.1 ms