Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.56□□□□□ -2.16
RHOP08100 SNORA22.1-201ENST00000362701 134 ntBASIC1.55□□□□□ -2.16
RHOP08100 SNORD116-21-201ENST00000384507 92 ntBASIC1.55□□□□□ -2.16
RHOP08100 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
RHOP08100 AC027119.1-201ENST00000440877 241 ntBASIC1.55□□□□□ -2.16
RHOP08100 AL096861.1-201ENST00000610899 123 ntBASIC1.55□□□□□ -2.16
RHOP08100 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.55□□□□□ -2.16
RHOP08100 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RHOP08100 SNORD115-2-201ENST00000362842 82 ntBASIC1.54□□□□□ -2.16
RHOP08100 Y_RNA.81-201ENST00000362997 102 ntBASIC1.54□□□□□ -2.16
RHOP08100 SNORD115-20-201ENST00000365099 82 ntBASIC1.54□□□□□ -2.16
RHOP08100 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
RHOP08100 RPL30P7-201ENST00000479312 323 ntBASIC1.54□□□□□ -2.16
RHOP08100 AC079140.2-201ENST00000506193 142 ntBASIC1.54□□□□□ -2.16
RHOP08100 Y_RNA.709-201ENST00000516952 92 ntBASIC1.54□□□□□ -2.16
RHOP08100 MIR4679-2-201ENST00000578358 77 ntBASIC1.54□□□□□ -2.16
RHOP08100 AL157834.3-201ENST00000615543 103 ntBASIC1.54□□□□□ -2.16
RHOP08100 SNORA1.1-201ENST00000364671 133 ntBASIC1.53□□□□□ -2.16
RHOP08100 Y_RNA.355-201ENST00000365462 98 ntBASIC1.53□□□□□ -2.16
RHOP08100 RNU6-1065P-201ENST00000384513 106 ntBASIC1.53□□□□□ -2.16
RHOP08100 Y_RNA.531-201ENST00000384589 121 ntBASIC1.53□□□□□ -2.16
RHOP08100 RPS3AP1-201ENST00000413190 320 ntBASIC1.53□□□□□ -2.16
RHOP08100 AL035461.1-201ENST00000421490 332 ntBASIC1.53□□□□□ -2.16
RHOP08100 RPS23P4-201ENST00000487908 423 ntBASIC1.53□□□□□ -2.16
RHOP08100 AC004812.1-201ENST00000540773 146 ntBASIC1.53□□□□□ -2.16
RHOP08100 AC022523.2-201ENST00000561045 150 ntBASIC1.53□□□□□ -2.16
RHOP08100 MIR548AO-201ENST00000579992 96 ntBASIC1.53□□□□□ -2.16
RHOP08100 MIR3163-201ENST00000581592 73 ntBASIC1.53□□□□□ -2.16
RHOP08100 MIR3192-201ENST00000584920 77 ntBASIC1.53□□□□□ -2.16
RHOP08100 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.53□□□□□ -2.16
RHOP08100 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
RHOP08100 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RHOP08100 Y_RNA.35-201ENST00000362601 101 ntBASIC1.52□□□□□ -2.17
RHOP08100 Y_RNA.281-201ENST00000364774 94 ntBASIC1.52□□□□□ -2.17
RHOP08100 RNU6-1104P-201ENST00000384723 104 ntBASIC1.52□□□□□ -2.17
RHOP08100 MIR518E-201ENST00000385252 88 ntBASIC1.52□□□□□ -2.17
RHOP08100 MT-TI-201ENST00000387365 69 ntBASIC1.52□□□□□ -2.17
RHOP08100 RNY4P18-201ENST00000391107 89 ntBASIC1.52□□□□□ -2.17
RHOP08100 AC063976.4-201ENST00000421971 163 ntBASIC1.52□□□□□ -2.17
RHOP08100 AL512326.2-201ENST00000426359 151 ntBASIC1.52□□□□□ -2.17
RHOP08100 HMGN1P33-201ENST00000432945 451 ntBASIC1.52□□□□□ -2.17
RHOP08100 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
RHOP08100 AC113410.1-201ENST00000505029 247 ntBASIC1.52□□□□□ -2.17
RHOP08100 RNU6-1258P-201ENST00000516911 111 ntBASIC1.52□□□□□ -2.17
RHOP08100 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RHOP08100 MIR8065-201ENST00000620577 100 ntBASIC1.52□□□□□ -2.17
RHOP08100 RNY4P6-201ENST00000363667 96 ntBASIC1.51□□□□□ -2.17
RHOP08100 Y_RNA.299-201ENST00000364973 94 ntBASIC1.51□□□□□ -2.17
RHOP08100 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
RHOP08100 MIR548A1-201ENST00000385041 97 ntBASIC1.51□□□□□ -2.17
RHOP08100 MIR759-201ENST00000390224 91 ntBASIC1.51□□□□□ -2.17
RHOP08100 MTATP6P29-201ENST00000415057 132 ntBASIC1.51□□□□□ -2.17
RHOP08100 RPL39P39-201ENST00000455840 151 ntBASIC1.51□□□□□ -2.17
RHOP08100 RNU7-113P-201ENST00000459273 62 ntBASIC1.51□□□□□ -2.17
RHOP08100 AC007012.1-201ENST00000567192 175 ntBASIC1.51□□□□□ -2.17
RHOP08100 Y_RNA.116-201ENST00000363292 103 ntBASIC1.5□□□□□ -2.17
RHOP08100 Y_RNA.171-201ENST00000363760 102 ntBASIC1.5□□□□□ -2.17
RHOP08100 RNU6-755P-201ENST00000364400 103 ntBASIC1.5□□□□□ -2.17
RHOP08100 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
RHOP08100 Y_RNA.354-201ENST00000365448 111 ntBASIC1.5□□□□□ -2.17
RHOP08100 RNU6-602P-201ENST00000411155 105 ntBASIC1.5□□□□□ -2.17
RHOP08100 snoU13.25-201ENST00000458945 104 ntBASIC1.5□□□□□ -2.17
RHOP08100 RNA5SP445-201ENST00000515889 115 ntBASIC1.5□□□□□ -2.17
RHOP08100 RNU6-970P-201ENST00000516312 107 ntBASIC1.5□□□□□ -2.17
RHOP08100 AC019176.1-201ENST00000518519 225 ntBASIC1.5□□□□□ -2.17
RHOP08100 AP003716.2-201ENST00000528260 108 ntBASIC1.5□□□□□ -2.17
RHOP08100 CYP3A52P-201ENST00000563326 91 ntBASIC1.5□□□□□ -2.17
RHOP08100 MIR3664-201ENST00000579074 99 ntBASIC1.5□□□□□ -2.17
RHOP08100 AL353770.2-201ENST00000620024 78 ntBASIC1.5□□□□□ -2.17
RHOP08100 MIR548D2-201ENST00000384955 97 ntBASIC1.49□□□□□ -2.17
RHOP08100 MIR1302-7-201ENST00000408841 72 ntBASIC1.49□□□□□ -2.17
RHOP08100 MIR3937-201ENST00000580135 106 ntBASIC1.49□□□□□ -2.17
RHOP08100 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RHOP08100 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
RHOP08100 SNORD115-19-201ENST00000363098 82 ntBASIC1.48□□□□□ -2.17
RHOP08100 SNORD115-18-201ENST00000363293 82 ntBASIC1.48□□□□□ -2.17
RHOP08100 Y_RNA.224-201ENST00000364308 111 ntBASIC1.48□□□□□ -2.17
RHOP08100 SNORD115-17-201ENST00000364612 82 ntBASIC1.48□□□□□ -2.17
RHOP08100 Y_RNA.362-201ENST00000365518 110 ntBASIC1.48□□□□□ -2.17
RHOP08100 Y_RNA.470-201ENST00000384307 117 ntBASIC1.48□□□□□ -2.17
RHOP08100 MIR1276-201ENST00000408707 83 ntBASIC1.48□□□□□ -2.17
RHOP08100 AC090844.1-201ENST00000422019 156 ntBASIC1.48□□□□□ -2.17
RHOP08100 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.48□□□□□ -2.17
RHOP08100 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
RHOP08100 AL133373.1-201ENST00000497098 94 ntBASIC1.48□□□□□ -2.17
RHOP08100 RNU6-412P-201ENST00000516434 106 ntBASIC1.48□□□□□ -2.17
RHOP08100 RNU6-165P-201ENST00000517170 99 ntBASIC1.48□□□□□ -2.17
RHOP08100 AL512310.8-201ENST00000550183 120 ntBASIC1.48□□□□□ -2.17
RHOP08100 RNU6-44P-201ENST00000384045 107 ntBASIC1.47□□□□□ -2.17
RHOP08100 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
RHOP08100 RNU4-69P-201ENST00000410677 143 ntBASIC1.47□□□□□ -2.17
RHOP08100 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
RHOP08100 AL035470.1-201ENST00000622571 220 ntBASIC1.47□□□□□ -2.17
RHOP08100 Y_RNA.85-201ENST00000363014 111 ntBASIC1.46□□□□□ -2.18
RHOP08100 SNORD38B-201ENST00000384690 67 ntBASIC1.46□□□□□ -2.18
RHOP08100 SNORD12C-201ENST00000386307 89 ntBASIC1.46□□□□□ -2.18
RHOP08100 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.46□□□□□ -2.18
RHOP08100 AC245047.7-201ENST00000440265 293 ntBASIC1.46□□□□□ -2.18
RHOP08100 RNA5SP33-201ENST00000516687 98 ntBASIC1.46□□□□□ -2.18
RHOP08100 RNU11-2P-201ENST00000516898 142 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms