Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC091932.4-201ENST00000623386 200 ntBASIC0.75□□□□□ -2.29
DDX58O95786 RNA5SP347-201ENST00000362445 119 ntBASIC0.74□□□□□ -2.29
DDX58O95786 Y_RNA.521-201ENST00000384560 114 ntBASIC0.74□□□□□ -2.29
DDX58O95786 SNORA20-201ENST00000384662 132 ntBASIC0.74□□□□□ -2.29
DDX58O95786 RNU6-1237P-201ENST00000384777 107 ntBASIC0.74□□□□□ -2.29
DDX58O95786 SNORD58.1-201ENST00000391313 66 ntBASIC0.74□□□□□ -2.29
DDX58O95786 AC020891.4-201ENST00000605745 93 ntBASIC0.74□□□□□ -2.29
DDX58O95786 uc_338.6-201ENST00000613544 171 ntBASIC0.74□□□□□ -2.29
DDX58O95786 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
DDX58O95786 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
DDX58O95786 RNU6-369P-201ENST00000362515 102 ntBASIC0.73□□□□□ -2.29
DDX58O95786 RNA5SP499-201ENST00000363982 119 ntBASIC0.73□□□□□ -2.29
DDX58O95786 RNU6-643P-201ENST00000384018 107 ntBASIC0.73□□□□□ -2.29
DDX58O95786 RNA5SP193-201ENST00000410353 107 ntBASIC0.73□□□□□ -2.29
DDX58O95786 RNA5SP127-201ENST00000411051 133 ntBASIC0.73□□□□□ -2.29
DDX58O95786 AC244098.3-201ENST00000424803 96 ntBASIC0.73□□□□□ -2.29
DDX58O95786 RPL39P25-201ENST00000449384 154 ntBASIC0.73□□□□□ -2.29
DDX58O95786 MIR4804-201ENST00000581683 73 ntBASIC0.73□□□□□ -2.29
DDX58O95786 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
DDX58O95786 Y_RNA.83-201ENST00000363005 113 ntBASIC0.72□□□□□ -2.29
DDX58O95786 SNORA25.7-201ENST00000364375 127 ntBASIC0.72□□□□□ -2.29
DDX58O95786 RNU6-463P-201ENST00000384340 107 ntBASIC0.72□□□□□ -2.29
DDX58O95786 RNU6-364P-201ENST00000384387 107 ntBASIC0.72□□□□□ -2.29
DDX58O95786 MIR193B-201ENST00000384907 83 ntBASIC0.72□□□□□ -2.29
DDX58O95786 MIR1257-201ENST00000408490 117 ntBASIC0.72□□□□□ -2.29
DDX58O95786 RNA5SP237-201ENST00000410414 113 ntBASIC0.72□□□□□ -2.29
DDX58O95786 U6.106-201ENST00000636360 105 ntBASIC0.72□□□□□ -2.29
DDX58O95786 Y_RNA.144-201ENST00000363521 113 ntBASIC0.71□□□□□ -2.3
DDX58O95786 Y_RNA.200-201ENST00000364018 102 ntBASIC0.71□□□□□ -2.3
DDX58O95786 RNU6-978P-201ENST00000364371 103 ntBASIC0.71□□□□□ -2.3
DDX58O95786 RNU6-275P-201ENST00000364910 107 ntBASIC0.71□□□□□ -2.3
DDX58O95786 MIR938-201ENST00000401216 83 ntBASIC0.71□□□□□ -2.3
DDX58O95786 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
DDX58O95786 RNA5SP121-201ENST00000516537 101 ntBASIC0.71□□□□□ -2.3
DDX58O95786 Y_RNA.412-201ENST00000384001 104 ntBASIC0.7□□□□□ -2.3
DDX58O95786 MIR92A1-201ENST00000385233 78 ntBASIC0.7□□□□□ -2.3
DDX58O95786 RNU6-1319P-201ENST00000390855 104 ntBASIC0.7□□□□□ -2.3
DDX58O95786 RNU6-747P-201ENST00000390928 104 ntBASIC0.7□□□□□ -2.3
DDX58O95786 RNU6-241P-201ENST00000391148 104 ntBASIC0.7□□□□□ -2.3
DDX58O95786 SNORA26.6-201ENST00000391256 115 ntBASIC0.7□□□□□ -2.3
DDX58O95786 RNU6-177P-201ENST00000411257 104 ntBASIC0.7□□□□□ -2.3
DDX58O95786 AC092628.1-201ENST00000436250 252 ntBASIC0.7□□□□□ -2.3
DDX58O95786 RNU7-185P-201ENST00000459215 60 ntBASIC0.7□□□□□ -2.3
DDX58O95786 MIR4711-201ENST00000578274 70 ntBASIC0.7□□□□□ -2.3
DDX58O95786 AL162730.1-201ENST00000605734 292 ntBASIC0.7□□□□□ -2.3
DDX58O95786 SNORD114-23-201ENST00000363536 72 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-447P-201ENST00000410293 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-1118P-201ENST00000410382 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-1076P-201ENST00000410397 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-355P-201ENST00000410427 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-791P-201ENST00000410467 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-705P-201ENST00000410601 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-1100P-201ENST00000410691 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-860P-201ENST00000410860 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-1217P-201ENST00000411276 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-785P-201ENST00000411324 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-1149P-201ENST00000516810 97 ntBASIC0.69□□□□□ -2.3
DDX58O95786 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.69□□□□□ -2.3
DDX58O95786 U6.90-201ENST00000614007 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 U6.70-201ENST00000620287 104 ntBASIC0.69□□□□□ -2.3
DDX58O95786 RNU6-1020P-201ENST00000363684 107 ntBASIC0.68□□□□□ -2.3
DDX58O95786 Y_RNA.489-201ENST00000384410 101 ntBASIC0.68□□□□□ -2.3
DDX58O95786 MIR573-201ENST00000384964 99 ntBASIC0.68□□□□□ -2.3
DDX58O95786 MIR125B2-201ENST00000385128 89 ntBASIC0.68□□□□□ -2.3
DDX58O95786 RNU7-56P-201ENST00000458744 62 ntBASIC0.68□□□□□ -2.3
DDX58O95786 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
DDX58O95786 RNU7-156P-201ENST00000517214 74 ntBASIC0.68□□□□□ -2.3
DDX58O95786 AC004817.2-201ENST00000561794 651 ntBASIC0.68□□□□□ -2.3
DDX58O95786 MIR411-201ENST00000362239 96 ntBASIC0.67□□□□□ -2.3
DDX58O95786 MIR624-201ENST00000385217 97 ntBASIC0.67□□□□□ -2.3
DDX58O95786 MT-TF-201ENST00000387314 71 ntBASIC0.67□□□□□ -2.3
DDX58O95786 RNU6-918P-201ENST00000391219 106 ntBASIC0.67□□□□□ -2.3
DDX58O95786 SNORD93-201ENST00000408813 74 ntBASIC0.67□□□□□ -2.3
DDX58O95786 AC098934.3-201ENST00000430450 190 ntBASIC0.67□□□□□ -2.3
DDX58O95786 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
DDX58O95786 MIR1273G-201ENST00000577677 100 ntBASIC0.67□□□□□ -2.3
DDX58O95786 AC021613.1-201ENST00000623880 111 ntBASIC0.67□□□□□ -2.3
DDX58O95786 Y_RNA.75-201ENST00000362927 97 ntBASIC0.66□□□□□ -2.3
DDX58O95786 RNU4-16P-201ENST00000364737 141 ntBASIC0.66□□□□□ -2.3
DDX58O95786 RNU6-1336P-201ENST00000383886 109 ntBASIC0.66□□□□□ -2.3
DDX58O95786 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
DDX58O95786 MRPS18CP4-201ENST00000535821 231 ntBASIC0.66□□□□□ -2.3
DDX58O95786 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
DDX58O95786 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.66□□□□□ -2.3
DDX58O95786 AL589743.1-201ENST00000551932 2712 ntBASIC0.66□□□□□ -2.3
DDX58O95786 MIR30D-201ENST00000362283 70 ntBASIC0.65□□□□□ -2.31
DDX58O95786 SNORA22.1-201ENST00000362701 134 ntBASIC0.65□□□□□ -2.31
DDX58O95786 RNU6-597P-201ENST00000365620 102 ntBASIC0.65□□□□□ -2.31
DDX58O95786 RNU6-47P-201ENST00000383866 107 ntBASIC0.65□□□□□ -2.31
DDX58O95786 Y_RNA.430-201ENST00000384081 110 ntBASIC0.65□□□□□ -2.31
DDX58O95786 Y_RNA.515-201ENST00000384535 112 ntBASIC0.65□□□□□ -2.31
DDX58O95786 MIR563-201ENST00000385080 79 ntBASIC0.65□□□□□ -2.31
DDX58O95786 RNU7-102P-201ENST00000458948 62 ntBASIC0.65□□□□□ -2.31
DDX58O95786 MIR4431-201ENST00000579990 94 ntBASIC0.65□□□□□ -2.31
DDX58O95786 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
DDX58O95786 MTND5P32-201ENST00000560711 1802 ntBASIC0.64□□□□□ -2.31
DDX58O95786 SCARNA15-202ENST00000516881 127 ntBASIC0.64□□□□□ -2.31
DDX58O95786 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.64□□□□□ -2.31
DDX58O95786 AC243829.3-201ENST00000622177 108 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 261.1 ms