Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 RNU4-70P-201ENST00000384579 139 ntBASIC0.52□□□□□ -2.33
CSDE1O75534 SNORA26.6-201ENST00000391256 115 ntBASIC0.52□□□□□ -2.33
CSDE1O75534 RNA5SP237-201ENST00000410414 113 ntBASIC0.52□□□□□ -2.33
CSDE1O75534 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.52□□□□□ -2.33
CSDE1O75534 MIR4308-201ENST00000580634 81 ntBASIC0.52□□□□□ -2.33
CSDE1O75534 MIR378D2-201ENST00000580636 98 ntBASIC0.52□□□□□ -2.33
CSDE1O75534 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
CSDE1O75534 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CSDE1O75534 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
CSDE1O75534 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
CSDE1O75534 MT-TF-201ENST00000387314 71 ntBASIC0.51□□□□□ -2.33
CSDE1O75534 Y_RNA.626-201ENST00000411288 95 ntBASIC0.51□□□□□ -2.33
CSDE1O75534 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
CSDE1O75534 RNU7-185P-201ENST00000459215 60 ntBASIC0.51□□□□□ -2.33
CSDE1O75534 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
CSDE1O75534 MIR3152-201ENST00000579801 74 ntBASIC0.51□□□□□ -2.33
CSDE1O75534 MIR3128-201ENST00000581957 66 ntBASIC0.51□□□□□ -2.33
CSDE1O75534 Y_RNA.60-201ENST00000362831 98 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-574P-201ENST00000384265 107 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 Y_RNA.478-201ENST00000384358 107 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 Y_RNA.571-201ENST00000384753 98 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-1237P-201ENST00000384777 107 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 MIR125B2-201ENST00000385128 89 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-1319P-201ENST00000390855 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-747P-201ENST00000390928 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-241P-201ENST00000391148 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-447P-201ENST00000410293 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-1118P-201ENST00000410382 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-1076P-201ENST00000410397 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-355P-201ENST00000410427 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-791P-201ENST00000410467 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-705P-201ENST00000410601 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-1100P-201ENST00000410691 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-860P-201ENST00000410860 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-177P-201ENST00000411257 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-1217P-201ENST00000411276 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 RNU6-785P-201ENST00000411324 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 AC008608.1-201ENST00000603910 127 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 AC062037.2-201ENST00000610137 73 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 U6.90-201ENST00000614007 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 U6.70-201ENST00000620287 104 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
CSDE1O75534 MIR30D-201ENST00000362283 70 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 Y_RNA.20-201ENST00000362479 113 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 Y_RNA.121-201ENST00000363309 113 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 RNA5SP325-201ENST00000363756 130 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 RNU6-978P-201ENST00000364371 103 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 RNU6-643P-201ENST00000384018 107 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 MIR563-201ENST00000385080 79 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 MIR140-201ENST00000385282 100 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 RNA5SP127-201ENST00000411051 133 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 RNU7-56P-201ENST00000458744 62 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 AL162730.1-201ENST00000605734 292 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 U4.1-201ENST00000620349 87 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 AC099654.10-201ENST00000640395 161 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 AL589743.1-201ENST00000551932 2712 ntBASIC0.49□□□□□ -2.33
CSDE1O75534 SNORA20.1-201ENST00000364790 130 ntBASIC0.48□□□□□ -2.33
CSDE1O75534 RNU6-1336P-201ENST00000383886 109 ntBASIC0.48□□□□□ -2.33
CSDE1O75534 RNU6-196P-201ENST00000384315 107 ntBASIC0.48□□□□□ -2.33
CSDE1O75534 RNU7-102P-201ENST00000458948 62 ntBASIC0.48□□□□□ -2.33
CSDE1O75534 RNU4-71P-201ENST00000516258 113 ntBASIC0.48□□□□□ -2.33
CSDE1O75534 RNU7-156P-201ENST00000517214 74 ntBASIC0.48□□□□□ -2.33
CSDE1O75534 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
CSDE1O75534 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CSDE1O75534 MIR18A-201ENST00000362310 71 ntBASIC0.47□□□□□ -2.33
CSDE1O75534 RNU6-702P-201ENST00000364982 107 ntBASIC0.47□□□□□ -2.33
CSDE1O75534 RNU4-45P-201ENST00000365469 141 ntBASIC0.47□□□□□ -2.33
CSDE1O75534 SNORD93-201ENST00000408813 74 ntBASIC0.47□□□□□ -2.33
CSDE1O75534 MTND3P2-201ENST00000438452 342 ntBASIC0.47□□□□□ -2.33
CSDE1O75534 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.47□□□□□ -2.33
CSDE1O75534 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CSDE1O75534 SNORA25.7-201ENST00000364375 127 ntBASIC0.46□□□□□ -2.34
CSDE1O75534 RNU4-16P-201ENST00000364737 141 ntBASIC0.46□□□□□ -2.34
CSDE1O75534 Y_RNA.521-201ENST00000384560 114 ntBASIC0.46□□□□□ -2.34
CSDE1O75534 MIR193B-201ENST00000384907 83 ntBASIC0.46□□□□□ -2.34
CSDE1O75534 SNORD58.1-201ENST00000391313 66 ntBASIC0.46□□□□□ -2.34
CSDE1O75534 RNU6-1149P-201ENST00000516810 97 ntBASIC0.46□□□□□ -2.34
CSDE1O75534 RNU6-111P-201ENST00000517179 105 ntBASIC0.46□□□□□ -2.34
CSDE1O75534 MIR4503-201ENST00000582187 83 ntBASIC0.46□□□□□ -2.34
CSDE1O75534 AC021613.1-201ENST00000623880 111 ntBASIC0.46□□□□□ -2.34
CSDE1O75534 SNORA22.1-201ENST00000362701 134 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 RNU6-275P-201ENST00000364910 107 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 Y_RNA.307-201ENST00000365022 117 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 Y_RNA.412-201ENST00000384001 104 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 Y_RNA.430-201ENST00000384081 110 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 Y_RNA.447-201ENST00000384184 113 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 MIR624-201ENST00000385217 97 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 SCARNA15-202ENST00000516881 127 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 MIR4719-201ENST00000585233 84 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 AL662814.1-201ENST00000617364 121 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 U6.106-201ENST00000636360 105 ntBASIC0.45□□□□□ -2.34
CSDE1O75534 Y_RNA.515-201ENST00000384535 112 ntBASIC0.44□□□□□ -2.34
CSDE1O75534 RNU6-679P-201ENST00000391003 106 ntBASIC0.44□□□□□ -2.34
CSDE1O75534 RNU4-83P-201ENST00000410863 133 ntBASIC0.44□□□□□ -2.34
CSDE1O75534 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 441.2 ms