Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.3□□□□□ -2.46
NPHP4O75161 MIR4723-201ENST00000585070 81 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 MT-TT-201ENST00000387460 66 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 RNU6-848P-201ENST00000515948 107 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 RNU6-617P-201ENST00000516147 107 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 RNU6-473P-201ENST00000516164 107 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 U6atac.1-201ENST00000616025 117 ntBASIC-0.3□□□□□ -2.46
NPHP4O75161 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 RNU6-949P-201ENST00000384040 107 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 MIR526A2-201ENST00000390198 65 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 RNA5SP261-201ENST00000410536 106 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 RNU7-159P-201ENST00000459284 62 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 RNU6-897P-201ENST00000517135 105 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 MIR3152-201ENST00000579801 74 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 AC091932.4-201ENST00000623386 200 ntBASIC-0.31□□□□□ -2.46
NPHP4O75161 RNU6-484P-201ENST00000384016 107 ntBASIC-0.32□□□□□ -2.46
NPHP4O75161 SNORA18-201ENST00000384416 132 ntBASIC-0.32□□□□□ -2.46
NPHP4O75161 RNA5SP163-201ENST00000410304 99 ntBASIC-0.32□□□□□ -2.46
NPHP4O75161 RNU6-121P-201ENST00000410525 99 ntBASIC-0.32□□□□□ -2.46
NPHP4O75161 AC108059.2-201ENST00000434626 151 ntBASIC-0.32□□□□□ -2.46
NPHP4O75161 SNRPGP8-201ENST00000454064 226 ntBASIC-0.32□□□□□ -2.46
NPHP4O75161 RNU6-976P-201ENST00000516086 111 ntBASIC-0.32□□□□□ -2.46
NPHP4O75161 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 RNY1P13-201ENST00000365030 105 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 RNY3P1-201ENST00000365085 102 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 MIR501-201ENST00000390204 84 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 MIR1468-201ENST00000410600 86 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.33□□□□□ -2.46
NPHP4O75161 RNU6-126P-201ENST00000516685 103 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 RNU6-531P-201ENST00000516694 104 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 MIR3129-201ENST00000581095 76 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 SNORA70.25-201ENST00000612741 95 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 MIR8064-201ENST00000612863 90 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 MIR1295B-201ENST00000636144 60 ntBASIC-0.33□□□□□ -2.46
NPHP4O75161 RNU6-450P-201ENST00000364654 107 ntBASIC-0.34□□□□□ -2.46
NPHP4O75161 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.34□□□□□ -2.46
NPHP4O75161 MIR892B-201ENST00000401279 77 ntBASIC-0.34□□□□□ -2.46
NPHP4O75161 MIR1302-11-201ENST00000408051 138 ntBASIC-0.34□□□□□ -2.46
NPHP4O75161 MIR1302-9-201ENST00000408365 138 ntBASIC-0.34□□□□□ -2.46
NPHP4O75161 MIR1302-10-201ENST00000408734 138 ntBASIC-0.34□□□□□ -2.46
NPHP4O75161 DEFB131E-201ENST00000532329 154 ntBASIC-0.34□□□□□ -2.46
NPHP4O75161 MIR4743-201ENST00000584576 69 ntBASIC-0.34□□□□□ -2.46
NPHP4O75161 MIR1302-2-201ENST00000607096 138 ntBASIC-0.34□□□□□ -2.46
NPHP4O75161 SNORA25.1-201ENST00000362326 128 ntBASIC-0.35□□□□□ -2.47
NPHP4O75161 SNORA22.1-201ENST00000362701 134 ntBASIC-0.35□□□□□ -2.47
NPHP4O75161 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.35□□□□□ -2.47
NPHP4O75161 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.35□□□□□ -2.47
NPHP4O75161 RNU6-652P-201ENST00000365488 107 ntBASIC-0.35□□□□□ -2.47
NPHP4O75161 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.35□□□□□ -2.47
NPHP4O75161 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.35□□□□□ -2.47
NPHP4O75161 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 RNU6-290P-201ENST00000365212 101 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 SNORA20-201ENST00000384662 132 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 MIR106A-201ENST00000384870 81 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 MIR626-201ENST00000385032 94 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 SNX3P1X-201ENST00000414887 175 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 SNORD57-201ENST00000448188 72 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 RNU7-165P-201ENST00000458864 60 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 RNU7-80P-201ENST00000459562 61 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 AC074198.2-201ENST00000508153 258 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 AC090574.1-201ENST00000623186 233 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 MIR6841-201ENST00000637129 72 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 MTND5P32-201ENST00000560711 1802 ntBASIC-0.36□□□□□ -2.47
NPHP4O75161 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 SNORD115-24-201ENST00000363528 82 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 RNU6-726P-201ENST00000364680 107 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 MIR548L-201ENST00000408303 86 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 AL731563.1-201ENST00000442202 214 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 SNORA27.4-201ENST00000516650 95 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 RNU6-453P-201ENST00000516819 85 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
NPHP4O75161 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 AL670379.3-201ENST00000605040 251 ntBASIC-0.37□□□□□ -2.47
NPHP4O75161 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 SNORD114-12-201ENST00000365400 75 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 RNU6-211P-201ENST00000384047 107 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 RNU6-475P-201ENST00000516073 104 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 RNY1P9-201ENST00000532431 109 ntBASIC-0.38□□□□□ -2.47
NPHP4O75161 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.38□□□□□ -2.47
NPHP4O75161 MIR5197-201ENST00000583721 112 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms