Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 U8.9-201ENST00000365667 134 ntBASIC2.71□□□□□ -1.98
PTCD1O75127 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
PTCD1O75127 RPS29P29-201ENST00000456396 171 ntBASIC2.71□□□□□ -1.98
PTCD1O75127 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.71□□□□□ -1.98
PTCD1O75127 RNU7-53P-201ENST00000516705 60 ntBASIC2.71□□□□□ -1.98
PTCD1O75127 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.71□□□□□ -1.98
PTCD1O75127 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
PTCD1O75127 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
PTCD1O75127 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
PTCD1O75127 RNA5SP276-201ENST00000362580 94 ntBASIC2.7□□□□□ -1.98
PTCD1O75127 RNU6-360P-201ENST00000390944 104 ntBASIC2.7□□□□□ -1.98
PTCD1O75127 SNORD77B-201ENST00000391112 67 ntBASIC2.7□□□□□ -1.98
PTCD1O75127 RNU6-613P-201ENST00000410412 108 ntBASIC2.7□□□□□ -1.98
PTCD1O75127 RNA5SP458-201ENST00000516188 119 ntBASIC2.7□□□□□ -1.98
PTCD1O75127 RNU2-19P-201ENST00000517288 84 ntBASIC2.7□□□□□ -1.98
PTCD1O75127 MIR4439-201ENST00000583746 80 ntBASIC2.7□□□□□ -1.98
PTCD1O75127 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.7□□□□□ -1.98
PTCD1O75127 MIR6845-201ENST00000613182 61 ntBASIC2.7□□□□□ -1.98
PTCD1O75127 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTCD1O75127 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.7□□□□□ -1.98
PTCD1O75127 AC131280.1-202ENST00000624067 4211 ntBASIC2.69□□□□□ -1.98
PTCD1O75127 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PTCD1O75127 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PTCD1O75127 MIR6073-201ENST00000352083 89 ntBASIC2.69□□□□□ -1.98
PTCD1O75127 RNU6-913P-201ENST00000390913 95 ntBASIC2.69□□□□□ -1.98
PTCD1O75127 SNORA26.9-201ENST00000391322 122 ntBASIC2.69□□□□□ -1.98
PTCD1O75127 RNA5SP181-201ENST00000410246 98 ntBASIC2.69□□□□□ -1.98
PTCD1O75127 AC096720.1-201ENST00000604441 183 ntBASIC2.69□□□□□ -1.98
PTCD1O75127 AC243994.1-201ENST00000618627 109 ntBASIC2.69□□□□□ -1.98
PTCD1O75127 MIR34C-201ENST00000384831 77 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 MIR524-201ENST00000385242 87 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 RN7SL499P-201ENST00000481141 276 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 RNU6-826P-201ENST00000516827 104 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 MIR3670-2-201ENST00000582974 65 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 MIR3670-1-201ENST00000584160 65 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 MIR3670-3-201ENST00000584855 65 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 MIR4791-201ENST00000607666 84 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 MIR3670-4-201ENST00000612260 65 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 AC245884.12-201ENST00000615364 59 ntBASIC2.68□□□□□ -1.98
PTCD1O75127 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.68□□□□□ -1.98
PTCD1O75127 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PTCD1O75127 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.67□□□□□ -1.98
PTCD1O75127 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PTCD1O75127 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PTCD1O75127 RNU6-1244P-201ENST00000363614 108 ntBASIC2.67□□□□□ -1.98
PTCD1O75127 RNU6-342P-201ENST00000384521 104 ntBASIC2.67□□□□□ -1.98
PTCD1O75127 RNU6-1067P-201ENST00000384752 107 ntBASIC2.67□□□□□ -1.98
PTCD1O75127 HMGN1P33-201ENST00000432945 451 ntBASIC2.67□□□□□ -1.98
PTCD1O75127 AC055731.1-201ENST00000474387 401 ntBASIC2.67□□□□□ -1.98
PTCD1O75127 MIR3152-201ENST00000579801 74 ntBASIC2.67□□□□□ -1.98
PTCD1O75127 MIR6717-201ENST00000622747 73 ntBASIC2.67□□□□□ -1.98
PTCD1O75127 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
PTCD1O75127 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
PTCD1O75127 RNU1-17P-201ENST00000363022 152 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 RNU6-203P-201ENST00000384038 104 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 MIR206-201ENST00000384872 86 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 SNORA48.3-201ENST00000391081 134 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 SNORD23.1-201ENST00000408212 104 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 RPL31P63-201ENST00000422565 375 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 RPL23AP6-201ENST00000446637 472 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 AC004223.1-201ENST00000479840 271 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 RNU7-2P-201ENST00000516096 62 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 AL137847.3-201ENST00000611521 109 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 Y_RNA.788-201ENST00000622394 112 ntBASIC2.66□□□□□ -1.98
PTCD1O75127 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.65□□□□□ -1.99
PTCD1O75127 AC090255.1-201ENST00000495779 349 ntBASIC2.65□□□□□ -1.99
PTCD1O75127 SNORA74.3-201ENST00000517108 154 ntBASIC2.65□□□□□ -1.99
PTCD1O75127 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.65□□□□□ -1.99
PTCD1O75127 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.65□□□□□ -1.99
PTCD1O75127 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.65□□□□□ -1.99
PTCD1O75127 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PTCD1O75127 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PTCD1O75127 RNU6-1123P-201ENST00000362347 106 ntBASIC2.64□□□□□ -1.99
PTCD1O75127 SNORA40.18-201ENST00000391200 128 ntBASIC2.64□□□□□ -1.99
PTCD1O75127 DNAJC19P9-201ENST00000555084 351 ntBASIC2.64□□□□□ -1.99
PTCD1O75127 AL020996.3-201ENST00000606617 222 ntBASIC2.64□□□□□ -1.99
PTCD1O75127 MIR583-201ENST00000384846 75 ntBASIC2.63□□□□□ -1.99
PTCD1O75127 AL445685.2-201ENST00000422551 342 ntBASIC2.63□□□□□ -1.99
PTCD1O75127 RNU1-98P-201ENST00000458992 160 ntBASIC2.63□□□□□ -1.99
PTCD1O75127 SNRPGP19-201ENST00000603826 189 ntBASIC2.63□□□□□ -1.99
PTCD1O75127 SNORD38.1-201ENST00000363863 68 ntBASIC2.62□□□□□ -1.99
PTCD1O75127 SNORA24-201ENST00000384096 131 ntBASIC2.62□□□□□ -1.99
PTCD1O75127 Y_RNA.537-201ENST00000384626 109 ntBASIC2.62□□□□□ -1.99
PTCD1O75127 RNA5SP261-201ENST00000410536 106 ntBASIC2.62□□□□□ -1.99
PTCD1O75127 SUMO1P4-201ENST00000429430 302 ntBASIC2.62□□□□□ -1.99
PTCD1O75127 RNU6-917P-201ENST00000516294 104 ntBASIC2.62□□□□□ -1.99
PTCD1O75127 RNU6-523P-201ENST00000516304 54 ntBASIC2.62□□□□□ -1.99
PTCD1O75127 AC145423.2-201ENST00000610631 239 ntBASIC2.62□□□□□ -1.99
PTCD1O75127 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
PTCD1O75127 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.62□□□□□ -1.99
PTCD1O75127 AC019129.1-201ENST00000403786 261 ntBASIC2.61□□□□□ -1.99
PTCD1O75127 AC004965.1-201ENST00000413033 213 ntBASIC2.61□□□□□ -1.99
PTCD1O75127 RNU7-73P-201ENST00000458743 63 ntBASIC2.61□□□□□ -1.99
PTCD1O75127 Y_RNA.676-201ENST00000516393 96 ntBASIC2.61□□□□□ -1.99
PTCD1O75127 RNU7-153P-201ENST00000516455 62 ntBASIC2.61□□□□□ -1.99
PTCD1O75127 AC140658.3-201ENST00000567603 271 ntBASIC2.61□□□□□ -1.99
PTCD1O75127 AL513043.2-201ENST00000573941 143 ntBASIC2.61□□□□□ -1.99
PTCD1O75127 MIR5002-201ENST00000584713 97 ntBASIC2.61□□□□□ -1.99
PTCD1O75127 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.61□□□□□ -1.99
PTCD1O75127 RNU6-478P-201ENST00000363904 110 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms