Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNU6-795P-201ENST00000516323 103 ntBASIC2.09□□□□□ -2.07
SRGAP3O43295 AC024614.2-201ENST00000577584 372 ntBASIC2.09□□□□□ -2.07
SRGAP3O43295 MIR4255-201ENST00000579351 72 ntBASIC2.09□□□□□ -2.07
SRGAP3O43295 AC245884.12-201ENST00000615364 59 ntBASIC2.09□□□□□ -2.07
SRGAP3O43295 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.09□□□□□ -2.07
SRGAP3O43295 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.08□□□□□ -2.08
SRGAP3O43295 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
SRGAP3O43295 RNU6-832P-201ENST00000363319 107 ntBASIC2.08□□□□□ -2.08
SRGAP3O43295 RNA5SP190-201ENST00000365222 118 ntBASIC2.08□□□□□ -2.08
SRGAP3O43295 Y_RNA.430-201ENST00000384081 110 ntBASIC2.08□□□□□ -2.08
SRGAP3O43295 RNY4P29-201ENST00000410801 97 ntBASIC2.08□□□□□ -2.08
SRGAP3O43295 MIR1270-201ENST00000459320 83 ntBASIC2.08□□□□□ -2.08
SRGAP3O43295 snoU13.16-201ENST00000459350 104 ntBASIC2.08□□□□□ -2.08
SRGAP3O43295 RNU6-917P-201ENST00000516294 104 ntBASIC2.08□□□□□ -2.08
SRGAP3O43295 RNU6-844P-201ENST00000517175 102 ntBASIC2.08□□□□□ -2.08
SRGAP3O43295 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.08□□□□□ -2.08
SRGAP3O43295 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SRGAP3O43295 RNU6-203P-201ENST00000384038 104 ntBASIC2.07□□□□□ -2.08
SRGAP3O43295 RNU6-360P-201ENST00000390944 104 ntBASIC2.07□□□□□ -2.08
SRGAP3O43295 RNU6-679P-201ENST00000391003 106 ntBASIC2.07□□□□□ -2.08
SRGAP3O43295 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.07□□□□□ -2.08
SRGAP3O43295 SNORD13-201ENST00000459299 104 ntBASIC2.07□□□□□ -2.08
SRGAP3O43295 RNU7-43P-201ENST00000516554 64 ntBASIC2.07□□□□□ -2.08
SRGAP3O43295 MIR3122-201ENST00000577243 73 ntBASIC2.07□□□□□ -2.08
SRGAP3O43295 MIR502-201ENST00000606349 86 ntBASIC2.07□□□□□ -2.08
SRGAP3O43295 AC008133.2-201ENST00000624540 351 ntBASIC2.07□□□□□ -2.08
SRGAP3O43295 RNU6-1123P-201ENST00000362347 106 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 RNU1-17P-201ENST00000363022 152 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 RNU6-1134P-201ENST00000365156 101 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 MIR520C-201ENST00000385005 87 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 AC245047.7-201ENST00000440265 293 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 AL353813.1-201ENST00000440700 253 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 RNU7-61P-201ENST00000515897 61 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 RNU6-521P-201ENST00000516663 105 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 MIR4764-201ENST00000580680 88 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 AC012531.4-201ENST00000616509 177 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 AL512310.12-203ENST00000640543 90 ntBASIC2.06□□□□□ -2.08
SRGAP3O43295 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SRGAP3O43295 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
SRGAP3O43295 Y_RNA.466-201ENST00000384294 113 ntBASIC2.05□□□□□ -2.08
SRGAP3O43295 SNORA18-201ENST00000384416 132 ntBASIC2.05□□□□□ -2.08
SRGAP3O43295 Y_RNA.659-201ENST00000515994 113 ntBASIC2.05□□□□□ -2.08
SRGAP3O43295 RNU6-170P-201ENST00000362832 104 ntBASIC2.04□□□□□ -2.08
SRGAP3O43295 Y_RNA.388-201ENST00000383919 113 ntBASIC2.04□□□□□ -2.08
SRGAP3O43295 RNU6-342P-201ENST00000384521 104 ntBASIC2.04□□□□□ -2.08
SRGAP3O43295 RNU6-644P-201ENST00000391155 98 ntBASIC2.04□□□□□ -2.08
SRGAP3O43295 RNU6-162P-201ENST00000516228 103 ntBASIC2.04□□□□□ -2.08
SRGAP3O43295 CYP3A52P-201ENST00000563326 91 ntBASIC2.04□□□□□ -2.08
SRGAP3O43295 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SRGAP3O43295 RNA5SP259-201ENST00000365541 109 ntBASIC2.03□□□□□ -2.08
SRGAP3O43295 AC004941.2-201ENST00000427009 228 ntBASIC2.03□□□□□ -2.08
SRGAP3O43295 RNU2-19P-201ENST00000517288 84 ntBASIC2.03□□□□□ -2.08
SRGAP3O43295 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
SRGAP3O43295 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.03□□□□□ -2.08
SRGAP3O43295 MIR548Z-201ENST00000584743 97 ntBASIC2.03□□□□□ -2.08
SRGAP3O43295 AC062037.1-201ENST00000605302 128 ntBASIC2.03□□□□□ -2.08
SRGAP3O43295 AC091304.10-201ENST00000641554 121 ntBASIC2.03□□□□□ -2.08
SRGAP3O43295 SNORD45B-201ENST00000364617 72 ntBASIC2.02□□□□□ -2.09
SRGAP3O43295 Y_RNA.290-201ENST00000364879 114 ntBASIC2.02□□□□□ -2.09
SRGAP3O43295 RNU6-1201P-201ENST00000384227 107 ntBASIC2.02□□□□□ -2.09
SRGAP3O43295 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.02□□□□□ -2.09
SRGAP3O43295 RNU6-322P-201ENST00000516010 103 ntBASIC2.02□□□□□ -2.09
SRGAP3O43295 AC026421.1-201ENST00000519101 163 ntBASIC2.02□□□□□ -2.09
SRGAP3O43295 MIR8055-201ENST00000610739 97 ntBASIC2.02□□□□□ -2.09
SRGAP3O43295 Y_RNA.354-201ENST00000365448 111 ntBASIC2.01□□□□□ -2.09
SRGAP3O43295 AC004965.1-201ENST00000413033 213 ntBASIC2.01□□□□□ -2.09
SRGAP3O43295 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
SRGAP3O43295 U7.3-201ENST00000616123 62 ntBASIC2.01□□□□□ -2.09
SRGAP3O43295 AL353997.5-201ENST00000618886 171 ntBASIC2.01□□□□□ -2.09
SRGAP3O43295 MIR8065-201ENST00000620577 100 ntBASIC2.01□□□□□ -2.09
SRGAP3O43295 MIR4251-201ENST00000635819 61 ntBASIC2.01□□□□□ -2.09
SRGAP3O43295 AC131280.1-202ENST00000624067 4211 ntBASIC2□□□□□ -2.09
SRGAP3O43295 MIR494-201ENST00000349529 81 ntBASIC2□□□□□ -2.09
SRGAP3O43295 RNU6-439P-201ENST00000384188 106 ntBASIC2□□□□□ -2.09
SRGAP3O43295 MIR513A1-201ENST00000385138 129 ntBASIC2□□□□□ -2.09
SRGAP3O43295 AL451046.2-201ENST00000403074 277 ntBASIC2□□□□□ -2.09
SRGAP3O43295 RNU6-602P-201ENST00000411155 105 ntBASIC2□□□□□ -2.09
SRGAP3O43295 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
SRGAP3O43295 SNORD111.1-201ENST00000516421 86 ntBASIC2□□□□□ -2.09
SRGAP3O43295 RNU6-1018P-201ENST00000516577 106 ntBASIC2□□□□□ -2.09
SRGAP3O43295 MIR548AO-201ENST00000579992 96 ntBASIC2□□□□□ -2.09
SRGAP3O43295 AC096720.1-201ENST00000604441 183 ntBASIC2□□□□□ -2.09
SRGAP3O43295 Z97988.1-201ENST00000637697 135 ntBASIC2□□□□□ -2.09
SRGAP3O43295 RNU6-1313P-201ENST00000362622 102 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 RNU6-60P-201ENST00000364792 103 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 Y_RNA.377-201ENST00000365644 108 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 MIR194-1-201ENST00000384892 85 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 SNORD23.1-201ENST00000408212 104 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 RNU6-1086P-201ENST00000410930 100 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 MRPL35P3-201ENST00000421557 364 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 AC108729.3-201ENST00000513484 108 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 RNU7-41P-201ENST00000515917 61 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 RNU7-2P-201ENST00000516096 62 ntBASIC1.99□□□□□ -2.09
SRGAP3O43295 Y_RNA.95-201ENST00000363079 95 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 SNORD115-35-201ENST00000365122 82 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 RNU6-1237P-201ENST00000384777 107 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 MIR206-201ENST00000384872 86 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 MIR450A2-201ENST00000385022 100 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 RNU6-482P-201ENST00000391068 107 ntBASIC1.98□□□□□ -2.09
SRGAP3O43295 SNORA17.3-201ENST00000391159 129 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms