Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 AC009779.6-201ENST00000603972 165 ntBASIC0.79□□□□□ -2.28
HOXC11O43248 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HOXC11O43248 RNU6-369P-201ENST00000362515 102 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 RNU6-47P-201ENST00000383866 107 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 Y_RNA.515-201ENST00000384535 112 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 MT-TF-201ENST00000387314 71 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 SNORA26.6-201ENST00000391256 115 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 RNA5SP222-201ENST00000411039 105 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 AC244098.3-201ENST00000424803 96 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 RNU6-1271P-201ENST00000517049 105 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.78□□□□□ -2.28
HOXC11O43248 AC130289.1-201ENST00000577321 73 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 MIR4431-201ENST00000579990 94 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 MIR4714-201ENST00000580728 77 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 MIR4804-201ENST00000581683 73 ntBASIC0.78□□□□□ -2.28
HOXC11O43248 RNU6-379P-201ENST00000363813 104 ntBASIC0.77□□□□□ -2.29
HOXC11O43248 Y_RNA.430-201ENST00000384081 110 ntBASIC0.77□□□□□ -2.29
HOXC11O43248 RNU6-364P-201ENST00000384387 107 ntBASIC0.77□□□□□ -2.29
HOXC11O43248 MIR613-201ENST00000385248 95 ntBASIC0.77□□□□□ -2.29
HOXC11O43248 MIR938-201ENST00000401216 83 ntBASIC0.77□□□□□ -2.29
HOXC11O43248 COX6CP6-201ENST00000490840 228 ntBASIC0.77□□□□□ -2.29
HOXC11O43248 RNU6-1149P-201ENST00000516810 97 ntBASIC0.77□□□□□ -2.29
HOXC11O43248 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
HOXC11O43248 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HOXC11O43248 Y_RNA.274-201ENST00000364714 101 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 RNU6-893P-201ENST00000458841 100 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 RNA5SP436-201ENST00000516020 115 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 AC020891.4-201ENST00000605745 93 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 uc_338.6-201ENST00000613544 171 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 AC141273.2-201ENST00000618989 130 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 AC078938.1-201ENST00000620993 318 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 AC021613.1-201ENST00000623880 111 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
HOXC11O43248 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
HOXC11O43248 RNU6-312P-201ENST00000364629 107 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-597P-201ENST00000365620 102 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 SNORA36.2-201ENST00000384004 127 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 MIR573-201ENST00000384964 99 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 MT-TG-201ENST00000387429 68 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-447P-201ENST00000410293 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-1118P-201ENST00000410382 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-1076P-201ENST00000410397 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-355P-201ENST00000410427 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-791P-201ENST00000410467 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-705P-201ENST00000410601 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-1100P-201ENST00000410691 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-860P-201ENST00000410860 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-1217P-201ENST00000411276 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU6-785P-201ENST00000411324 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 RNU7-185P-201ENST00000459215 60 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 U6.90-201ENST00000614007 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.75□□□□□ -2.29
HOXC11O43248 U6.70-201ENST00000620287 104 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
HOXC11O43248 Y_RNA.466-201ENST00000384294 113 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 Y_RNA.476-201ENST00000384347 108 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 RNU6-342P-201ENST00000384521 104 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 Y_RNA.552-201ENST00000384665 112 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 RNU6-1237P-201ENST00000384777 107 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 MIR563-201ENST00000385080 79 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 MIR125B2-201ENST00000385128 89 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 AC107027.2-201ENST00000512197 115 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 RNU6-388P-201ENST00000517012 105 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 RNU6-389P-201ENST00000517048 105 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 AC022559.1-201ENST00000520905 205 ntBASIC0.74□□□□□ -2.29
HOXC11O43248 SNORA22.1-201ENST00000362701 134 ntBASIC0.73□□□□□ -2.29
HOXC11O43248 Y_RNA.393-201ENST00000383936 102 ntBASIC0.73□□□□□ -2.29
HOXC11O43248 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.73□□□□□ -2.29
HOXC11O43248 RNU7-56P-201ENST00000458744 62 ntBASIC0.73□□□□□ -2.29
HOXC11O43248 RNU6-1219P-201ENST00000516143 112 ntBASIC0.73□□□□□ -2.29
HOXC11O43248 SCARNA15-202ENST00000516881 127 ntBASIC0.73□□□□□ -2.29
HOXC11O43248 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.73□□□□□ -2.29
HOXC11O43248 Y_RNA.233-201ENST00000364407 101 ntBASIC0.72□□□□□ -2.29
HOXC11O43248 Y_RNA.297-201ENST00000364950 91 ntBASIC0.72□□□□□ -2.29
HOXC11O43248 Y_RNA.337-201ENST00000365312 102 ntBASIC0.72□□□□□ -2.29
HOXC11O43248 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.72□□□□□ -2.29
HOXC11O43248 AC072026.1-201ENST00000605023 201 ntBASIC0.72□□□□□ -2.29
HOXC11O43248 MIR30D-201ENST00000362283 70 ntBASIC0.71□□□□□ -2.3
HOXC11O43248 RNU4-45P-201ENST00000365469 141 ntBASIC0.71□□□□□ -2.3
HOXC11O43248 Y_RNA.357-201ENST00000365487 109 ntBASIC0.71□□□□□ -2.3
HOXC11O43248 SNORD93-201ENST00000408813 74 ntBASIC0.71□□□□□ -2.3
HOXC11O43248 Y_RNA.644-201ENST00000459006 113 ntBASIC0.71□□□□□ -2.3
HOXC11O43248 Y_RNA.674-201ENST00000516362 113 ntBASIC0.71□□□□□ -2.3
HOXC11O43248 RNA5SP480-201ENST00000516840 109 ntBASIC0.71□□□□□ -2.3
HOXC11O43248 RNU7-156P-201ENST00000517214 74 ntBASIC0.71□□□□□ -2.3
HOXC11O43248 MTND5P32-201ENST00000560711 1802 ntBASIC0.71□□□□□ -2.3
HOXC11O43248 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
HOXC11O43248 RNU6-1336P-201ENST00000383886 109 ntBASIC0.7□□□□□ -2.3
HOXC11O43248 Y_RNA.793-201ENST00000411222 111 ntBASIC0.7□□□□□ -2.3
HOXC11O43248 AC004812.1-201ENST00000540773 146 ntBASIC0.7□□□□□ -2.3
HOXC11O43248 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
HOXC11O43248 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.7□□□□□ -2.3
HOXC11O43248 AL662814.1-201ENST00000617364 121 ntBASIC0.7□□□□□ -2.3
HOXC11O43248 MIR6513-201ENST00000621188 64 ntBASIC0.7□□□□□ -2.3
HOXC11O43248 RNU4-16P-201ENST00000364737 141 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms