Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR34C-201ENST00000384831 77 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 RNU6-1321P-201ENST00000390905 107 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 BTF3P4-201ENST00000418852 495 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 RNU7-48P-201ENST00000458875 63 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 RNU6-162P-201ENST00000516228 103 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 AC141846.1-201ENST00000568348 142 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 MIR5007-201ENST00000583098 95 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 MIR3192-201ENST00000584920 77 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 AL096861.1-201ENST00000610899 123 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 MIR6817-201ENST00000615588 66 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 AL662814.1-201ENST00000617364 121 ntBASIC1.96□□□□□ -2.1
SHISA3A0PJX4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SHISA3A0PJX4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SHISA3A0PJX4 RNU4-82P-201ENST00000362443 140 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 RNA5SP68-201ENST00000363885 119 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 Y_RNA.247-201ENST00000364500 92 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 RNU6-396P-201ENST00000365369 105 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 MIR144-201ENST00000384886 86 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 Y_RNA.593-201ENST00000410292 98 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 AC109327.2-201ENST00000448339 378 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 RPL39P39-201ENST00000455840 151 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 snoU13.2-201ENST00000459201 104 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
SHISA3A0PJX4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SHISA3A0PJX4 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 RNA5SP138-201ENST00000365098 114 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 RNU6-1152P-201ENST00000384576 107 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 RNU6-1237P-201ENST00000384777 107 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 RNA5SP508-201ENST00000411327 119 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 AC121758.2-201ENST00000553271 193 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 MIR4299-201ENST00000577899 72 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 MIR4264-201ENST00000583520 66 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 AP001362.1-201ENST00000625165 124 ntBASIC1.94□□□□□ -2.1
SHISA3A0PJX4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.94□□□□□ -2.1
SHISA3A0PJX4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHISA3A0PJX4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SHISA3A0PJX4 RNU6-1163P-201ENST00000364516 107 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 RNA5SP37-201ENST00000365420 130 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 RNU6-949P-201ENST00000384040 107 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 MT-TN-201ENST00000387400 73 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 U8.15-201ENST00000390947 134 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 MIR548G-201ENST00000408442 89 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 MIR1302-7-201ENST00000408841 72 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 AC244023.1-201ENST00000426884 112 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 RNA5SP148-201ENST00000516527 94 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 MIR4298-201ENST00000584380 73 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
SHISA3A0PJX4 AP000942.3-201ENST00000603702 160 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 AC242498.1-201ENST00000604134 111 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 RNU6-90P-201ENST00000606352 106 ntBASIC1.93□□□□□ -2.1
SHISA3A0PJX4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SHISA3A0PJX4 MIR494-201ENST00000349529 81 ntBASIC1.92□□□□□ -2.1
SHISA3A0PJX4 RNA5SP173-201ENST00000364857 136 ntBASIC1.92□□□□□ -2.1
SHISA3A0PJX4 SNORD58A-201ENST00000383875 65 ntBASIC1.92□□□□□ -2.1
SHISA3A0PJX4 RNU6-301P-201ENST00000384277 107 ntBASIC1.92□□□□□ -2.1
SHISA3A0PJX4 SNORD116-22-201ENST00000384430 92 ntBASIC1.92□□□□□ -2.1
SHISA3A0PJX4 MIR2115-201ENST00000516657 100 ntBASIC1.92□□□□□ -2.1
SHISA3A0PJX4 SNORA44.1-201ENST00000517031 108 ntBASIC1.92□□□□□ -2.1
SHISA3A0PJX4 AC133485.1-201ENST00000567176 124 ntBASIC1.92□□□□□ -2.1
SHISA3A0PJX4 AC105081.1-201ENST00000617727 106 ntBASIC1.92□□□□□ -2.1
SHISA3A0PJX4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SHISA3A0PJX4 SNORD33-201ENST00000362761 85 ntBASIC1.91□□□□□ -2.1
SHISA3A0PJX4 MIR17-201ENST00000385012 84 ntBASIC1.91□□□□□ -2.1
SHISA3A0PJX4 MIR563-201ENST00000385080 79 ntBASIC1.91□□□□□ -2.1
SHISA3A0PJX4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.91□□□□□ -2.1
SHISA3A0PJX4 RNU11-2P-201ENST00000516898 142 ntBASIC1.91□□□□□ -2.1
SHISA3A0PJX4 AP000753.3-201ENST00000604083 169 ntBASIC1.91□□□□□ -2.1
SHISA3A0PJX4 RNU6-86P-201ENST00000606534 107 ntBASIC1.91□□□□□ -2.1
SHISA3A0PJX4 AC103810.8-201ENST00000607347 118 ntBASIC1.91□□□□□ -2.1
SHISA3A0PJX4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
SHISA3A0PJX4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
SHISA3A0PJX4 AC131280.1-202ENST00000624067 4211 ntBASIC1.91□□□□□ -2.1
SHISA3A0PJX4 RNY1P10-201ENST00000363268 113 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 RNY1P2-201ENST00000364820 117 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 RNU6-675P-201ENST00000384236 104 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 Y_RNA.567-201ENST00000384736 106 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 MIR588-201ENST00000384900 83 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 snoU13.9-201ENST00000458927 103 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 AL133373.1-201ENST00000497098 94 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.9□□□□□ -2.11
SHISA3A0PJX4 RNA5SP445-201ENST00000515889 115 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 AP003327.1-201ENST00000529684 127 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 IGLL4P-201ENST00000614590 133 ntBASIC1.9□□□□□ -2.11
SHISA3A0PJX4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SHISA3A0PJX4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SHISA3A0PJX4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
SHISA3A0PJX4 MIR302D-201ENST00000362275 68 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 Y_RNA.190-201ENST00000363964 101 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 RNY1P1-201ENST00000364372 112 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 MIR221-201ENST00000385135 110 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 AC027119.1-201ENST00000440877 241 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 RNA5SP24-201ENST00000516478 95 ntBASIC1.89□□□□□ -2.11
SHISA3A0PJX4 AC103810.7-201ENST00000607821 91 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 295.7 ms