Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 RNU6-120P-201ENST00000516077 103 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 AC145350.1-201ENST00000567426 208 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 MIR3611-201ENST00000584484 83 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 Z99129.1-201ENST00000612510 255 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 MIR6851-201ENST00000617060 67 ntBASIC-1.37□□□□□ -2.63
TRAV4A0A0B4J268 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.38□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.38□□□□□ -2.63
TRAV4A0A0B4J268 RNU6-154P-201ENST00000384306 106 ntBASIC-1.38□□□□□ -2.63
TRAV4A0A0B4J268 SNORD56B-201ENST00000384713 71 ntBASIC-1.38□□□□□ -2.63
TRAV4A0A0B4J268 RNU6-191P-201ENST00000516295 94 ntBASIC-1.38□□□□□ -2.63
TRAV4A0A0B4J268 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.38□□□□□ -2.63
TRAV4A0A0B4J268 RNU7-70P-201ENST00000516941 66 ntBASIC-1.38□□□□□ -2.63
TRAV4A0A0B4J268 MTND5P40-201ENST00000559945 246 ntBASIC-1.38□□□□□ -2.63
TRAV4A0A0B4J268 MIR5197-201ENST00000583721 112 ntBASIC-1.38□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.39□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.39□□□□□ -2.63
TRAV4A0A0B4J268 SNORD63-201ENST00000384262 68 ntBASIC-1.39□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.39□□□□□ -2.63
TRAV4A0A0B4J268 SNORD38.3-201ENST00000516599 73 ntBASIC-1.39□□□□□ -2.63
TRAV4A0A0B4J268 AP000676.1-201ENST00000533307 52 ntBASIC-1.39□□□□□ -2.63
TRAV4A0A0B4J268 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.39□□□□□ -2.63
TRAV4A0A0B4J268 MIR376A2-201ENST00000636782 80 ntBASIC-1.39□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 RNU6-510P-201ENST00000391239 108 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 RNU2-55P-201ENST00000411146 174 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 MTND1P1-201ENST00000445453 368 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 RNA5SP67-201ENST00000516422 131 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 AC040926.1-201ENST00000530195 238 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 AC024909.2-201ENST00000553035 286 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 MIR5692C2-201ENST00000577959 77 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 MIR6738-201ENST00000619620 64 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 AL669831.3-213ENST00000636676 183 ntBASIC-1.4□□□□□ -2.63
TRAV4A0A0B4J268 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.41□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.41□□□□□ -2.64
TRAV4A0A0B4J268 SNORA53-201ENST00000391141 249 ntBASIC-1.41□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.41□□□□□ -2.64
TRAV4A0A0B4J268 RNA5SP153-201ENST00000516498 76 ntBASIC-1.41□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.41□□□□□ -2.64
TRAV4A0A0B4J268 AC138305.3-201ENST00000624988 240 ntBASIC-1.41□□□□□ -2.64
TRAV4A0A0B4J268 MIR20A-201ENST00000362279 71 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 MIR587-201ENST00000384845 96 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-415P-201ENST00000516252 97 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-764P-201ENST00000516396 105 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 RNU7-137P-201ENST00000516788 62 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 MIR5688-201ENST00000580619 83 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 MIR548AE1-201ENST00000583292 70 ntBASIC-1.42□□□□□ -2.64
TRAV4A0A0B4J268 SNORD114-10-201ENST00000363409 72 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 MIR518B-201ENST00000385127 83 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 AC093423.1-201ENST00000440817 142 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 SEPT14P8-201ENST00000508026 178 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 MIR4460-201ENST00000577862 86 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 VN1R91P-201ENST00000594377 169 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-86P-201ENST00000606534 107 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 MTND5P18-201ENST00000445624 1801 ntBASIC-1.43□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.44□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-937P-201ENST00000384325 106 ntBASIC-1.44□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.44□□□□□ -2.64
TRAV4A0A0B4J268 MIR526A2-201ENST00000390198 65 ntBASIC-1.44□□□□□ -2.64
TRAV4A0A0B4J268 SNORD113-5-201ENST00000607261 78 ntBASIC-1.44□□□□□ -2.64
TRAV4A0A0B4J268 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.44□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 MIR617-201ENST00000385030 97 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 MIR519E-201ENST00000385075 84 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-314P-201ENST00000516574 104 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 SNORD67.1-201ENST00000516618 108 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 MIR3179-1-201ENST00000578940 84 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 MIR3179-2-201ENST00000579107 84 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 MIR3179-3-201ENST00000579566 84 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 MIR3129-201ENST00000581095 76 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 MIR4324-201ENST00000584846 72 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 MIR3179-4-201ENST00000617599 84 ntBASIC-1.45□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.46□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-10P-201ENST00000384036 107 ntBASIC-1.46□□□□□ -2.64
TRAV4A0A0B4J268 MIR519A1-201ENST00000385257 85 ntBASIC-1.46□□□□□ -2.64
TRAV4A0A0B4J268 MIR548I2-201ENST00000408348 149 ntBASIC-1.46□□□□□ -2.64
TRAV4A0A0B4J268 AC096644.2-201ENST00000429278 159 ntBASIC-1.46□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.46□□□□□ -2.64
TRAV4A0A0B4J268 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.46□□□□□ -2.64
TRAV4A0A0B4J268 AC097639.2-201ENST00000603159 172 ntBASIC-1.46□□□□□ -2.64
TRAV4A0A0B4J268 C8orf59P2-201ENST00000603441 271 ntBASIC-1.46□□□□□ -2.64
TRAV4A0A0B4J268 SNORD114-25-201ENST00000363742 72 ntBASIC-1.47□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-484P-201ENST00000384016 107 ntBASIC-1.47□□□□□ -2.64
TRAV4A0A0B4J268 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.47□□□□□ -2.64
TRAV4A0A0B4J268 RNU6-721P-201ENST00000410155 105 ntBASIC-1.47□□□□□ -2.64
TRAV4A0A0B4J268 MTND1P34-201ENST00000438556 671 ntBASIC-1.47□□□□□ -2.64
TRAV4A0A0B4J268 AC099799.1-201ENST00000439809 192 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms