Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU6-859P-201ENST00000362728 107 ntBASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 Y_RNA.567-201ENST00000384736 106 ntBASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 MIR9-1-201ENST00000385198 89 ntBASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 MIR653-201ENST00000385279 96 ntBASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 RNU6-279P-201ENST00000391297 101 ntBASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 MIR4529-201ENST00000578110 78 ntBASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 RNU6-90P-201ENST00000606352 106 ntBASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.7□□□□□ -1.98
PCDHB11Q9Y5F2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PCDHB11Q9Y5F2 MIR194-1-201ENST00000384892 85 ntBASIC2.69□□□□□ -1.98
PCDHB11Q9Y5F2 AC003982.1-202ENST00000469928 248 ntBASIC2.69□□□□□ -1.98
PCDHB11Q9Y5F2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.69□□□□□ -1.98
PCDHB11Q9Y5F2 RNU6-322P-201ENST00000516010 103 ntBASIC2.69□□□□□ -1.98
PCDHB11Q9Y5F2 SNORA9.3-201ENST00000516383 129 ntBASIC2.69□□□□□ -1.98
PCDHB11Q9Y5F2 AC105081.1-201ENST00000617727 106 ntBASIC2.69□□□□□ -1.98
PCDHB11Q9Y5F2 AC006160.2-201ENST00000637708 154 ntBASIC2.69□□□□□ -1.98
PCDHB11Q9Y5F2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 Y_RNA.98-201ENST00000363109 102 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 RNU6-509P-201ENST00000363519 107 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 SNORA3A-201ENST00000364113 130 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 Y_RNA.437-201ENST00000384113 113 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 SNORD38B-201ENST00000384690 67 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 Y_RNA.611-201ENST00000410682 108 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 RPL31P63-201ENST00000422565 375 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 RNU7-48P-201ENST00000458875 63 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 DEFB122-202ENST00000569013 197 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 MIR3605-201ENST00000583214 100 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 MIR3935-201ENST00000583472 104 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 SNORD38B-202ENST00000625943 69 ntBASIC2.68□□□□□ -1.98
PCDHB11Q9Y5F2 Y_RNA.4-201ENST00000362333 112 ntBASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 SNORD38.2-201ENST00000384470 69 ntBASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 Y_RNA.609-201ENST00000410669 89 ntBASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 AC004965.1-201ENST00000413033 213 ntBASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 RN7SL499P-201ENST00000481141 276 ntBASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 SNORA31.15-201ENST00000516771 132 ntBASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PCDHB11Q9Y5F2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 RNU6-633P-201ENST00000362612 103 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 Y_RNA.244-201ENST00000364484 109 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 RNY1P13-201ENST00000365030 105 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 Y_RNA.313-201ENST00000365095 103 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 RNU6-1237P-201ENST00000384777 107 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 AC019129.1-201ENST00000403786 261 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 MIR1261-201ENST00000408659 82 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 RNA5SP21-201ENST00000410917 96 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 SPINT5P-201ENST00000448174 155 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 RNU7-41P-201ENST00000515917 61 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 AP001362.1-201ENST00000625165 124 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 MIR548BB-201ENST00000626714 66 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCDHB11Q9Y5F2 Y_RNA.173-201ENST00000363776 113 ntBASIC2.65□□□□□ -1.99
PCDHB11Q9Y5F2 Y_RNA.191-201ENST00000363972 113 ntBASIC2.65□□□□□ -1.99
PCDHB11Q9Y5F2 RNU1-52P-201ENST00000384190 164 ntBASIC2.65□□□□□ -1.99
PCDHB11Q9Y5F2 AL513328.1-201ENST00000446460 224 ntBASIC2.65□□□□□ -1.99
PCDHB11Q9Y5F2 RNU7-193P-201ENST00000516723 65 ntBASIC2.65□□□□□ -1.99
PCDHB11Q9Y5F2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PCDHB11Q9Y5F2 RNU6-1125P-201ENST00000363601 107 ntBASIC2.64□□□□□ -1.99
PCDHB11Q9Y5F2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHB11Q9Y5F2 RNU1-98P-201ENST00000458992 160 ntBASIC2.64□□□□□ -1.99
PCDHB11Q9Y5F2 RNU6-857P-201ENST00000515893 110 ntBASIC2.64□□□□□ -1.99
PCDHB11Q9Y5F2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.64□□□□□ -1.99
PCDHB11Q9Y5F2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
PCDHB11Q9Y5F2 RNA5SP138-201ENST00000365098 114 ntBASIC2.63□□□□□ -1.99
PCDHB11Q9Y5F2 RNA5SP237-201ENST00000410414 113 ntBASIC2.63□□□□□ -1.99
PCDHB11Q9Y5F2 AC008413.1-201ENST00000511864 177 ntBASIC2.63□□□□□ -1.99
PCDHB11Q9Y5F2 AC141846.1-201ENST00000568348 142 ntBASIC2.63□□□□□ -1.99
PCDHB11Q9Y5F2 AC012676.2-201ENST00000619258 186 ntBASIC2.63□□□□□ -1.99
PCDHB11Q9Y5F2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.63□□□□□ -1.99
PCDHB11Q9Y5F2 RNA5SP48-201ENST00000363969 126 ntBASIC2.62□□□□□ -1.99
PCDHB11Q9Y5F2 RNU1-112P-201ENST00000364401 164 ntBASIC2.62□□□□□ -1.99
PCDHB11Q9Y5F2 AL161935.2-201ENST00000414627 60 ntBASIC2.62□□□□□ -1.99
PCDHB11Q9Y5F2 AC009474.2-201ENST00000451383 136 ntBASIC2.62□□□□□ -1.99
PCDHB11Q9Y5F2 SNORD111.1-201ENST00000516421 86 ntBASIC2.62□□□□□ -1.99
PCDHB11Q9Y5F2 MTND5P40-201ENST00000559945 246 ntBASIC2.62□□□□□ -1.99
PCDHB11Q9Y5F2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHB11Q9Y5F2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
PCDHB11Q9Y5F2 RNA5SP68-201ENST00000363885 119 ntBASIC2.61□□□□□ -1.99
PCDHB11Q9Y5F2 SNORA70B-201ENST00000384210 135 ntBASIC2.61□□□□□ -1.99
PCDHB11Q9Y5F2 Y_RNA.607-201ENST00000410597 98 ntBASIC2.61□□□□□ -1.99
PCDHB11Q9Y5F2 AL161932.1-201ENST00000437408 146 ntBASIC2.61□□□□□ -1.99
PCDHB11Q9Y5F2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.61□□□□□ -1.99
PCDHB11Q9Y5F2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PCDHB11Q9Y5F2 MIR6817-201ENST00000615588 66 ntBASIC2.61□□□□□ -1.99
PCDHB11Q9Y5F2 AL662814.1-201ENST00000617364 121 ntBASIC2.61□□□□□ -1.99
PCDHB11Q9Y5F2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
PCDHB11Q9Y5F2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHB11Q9Y5F2 Y_RNA.221-201ENST00000364248 96 ntBASIC2.6□□□□□ -1.99
PCDHB11Q9Y5F2 RNU6-613P-201ENST00000410412 108 ntBASIC2.6□□□□□ -1.99
PCDHB11Q9Y5F2 RNU2-19P-201ENST00000517288 84 ntBASIC2.6□□□□□ -1.99
PCDHB11Q9Y5F2 AL513043.2-201ENST00000573941 143 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms