Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNY1P8-201ENST00000383970 114 ntBASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 MIR573-201ENST00000384964 99 ntBASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 RNU7-45P-201ENST00000459460 63 ntBASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 RNY3P16-201ENST00000516338 101 ntBASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 AL360085.1-201ENST00000604713 532 ntBASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.53□□□□□ -2.32
ATG4BQ9Y4P1 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 SNORD27-201ENST00000363981 72 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 RNU4-45P-201ENST00000365469 141 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 SNORD12C-201ENST00000386307 89 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 AL121914.1-201ENST00000450188 156 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 MIR4804-201ENST00000581683 73 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 MIR376A2-201ENST00000636782 80 ntBASIC0.52□□□□□ -2.33
ATG4BQ9Y4P1 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 MIR548H3-201ENST00000408771 118 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 RNU6-177P-201ENST00000411257 104 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 SEPT7P4-201ENST00000437076 306 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 SNORD127-201ENST00000458892 86 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 snoU13.2-201ENST00000459201 104 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 AL596211.1-201ENST00000569873 2277 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 Z83818.1-201ENST00000603584 150 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
ATG4BQ9Y4P1 RNU6-103P-201ENST00000363686 107 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 Y_RNA.477-201ENST00000384352 108 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 RNU6-364P-201ENST00000384387 107 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 RNU6-493P-201ENST00000391321 108 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 MIR938-201ENST00000401216 83 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 MIR1257-201ENST00000408490 117 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 AL358176.2-201ENST00000425769 204 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 MIR18B-201ENST00000454574 71 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 RNA5SP480-201ENST00000516840 109 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 MIR5197-201ENST00000583721 112 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 AC011921.3-201ENST00000605540 361 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 MIR6717-201ENST00000622747 73 ntBASIC0.5□□□□□ -2.33
ATG4BQ9Y4P1 SNORD114-26-201ENST00000363543 72 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 RNU7-56P-201ENST00000458744 62 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 RNU7-185P-201ENST00000459215 60 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 RNU7-80P-201ENST00000459562 61 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 RNU6-327P-201ENST00000516270 127 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 MIR3612-201ENST00000579753 87 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 MIR4744-201ENST00000581563 82 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 AL162730.1-201ENST00000605734 292 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 RNU2-4P-201ENST00000606190 192 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.49□□□□□ -2.33
ATG4BQ9Y4P1 Y_RNA.65-201ENST00000362846 100 ntBASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 Y_RNA.618-201ENST00000410949 107 ntBASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 RPL39P25-201ENST00000449384 154 ntBASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 RNU7-70P-201ENST00000516941 66 ntBASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 AC091932.4-201ENST00000623386 200 ntBASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
ATG4BQ9Y4P1 RNU6-923P-201ENST00000364753 107 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 MIR7-2-201ENST00000384970 110 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 MIR216A-201ENST00000385063 110 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 MIR125B2-201ENST00000385128 89 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 MIR140-201ENST00000385282 100 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 SNORA26.6-201ENST00000391256 115 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 MIR1302-3-201ENST00000408128 138 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 RNA5SP237-201ENST00000410414 113 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 RNA5SP261-201ENST00000410536 106 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 RNU7-102P-201ENST00000458948 62 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 Y_RNA.797-201ENST00000515977 94 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 SNORD116-25-201ENST00000516517 92 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.47□□□□□ -2.33
ATG4BQ9Y4P1 MIR18A-201ENST00000362310 71 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-1319P-201ENST00000390855 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-747P-201ENST00000390928 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-578P-201ENST00000390980 103 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-241P-201ENST00000391148 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-447P-201ENST00000410293 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-1118P-201ENST00000410382 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-1076P-201ENST00000410397 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-355P-201ENST00000410427 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-791P-201ENST00000410467 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-705P-201ENST00000410601 104 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU4-43P-201ENST00000410628 137 ntBASIC0.46□□□□□ -2.34
ATG4BQ9Y4P1 RNU6-1100P-201ENST00000410691 104 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms