Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MIR6740-201ENST00000618268 113 ntBASIC0.4□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.7-201ENST00000362352 102 ntBASIC0.39□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-484P-201ENST00000384016 107 ntBASIC0.39□□□□□ -2.35
NPC1L1Q9UHC9 MIR125B2-201ENST00000385128 89 ntBASIC0.39□□□□□ -2.35
NPC1L1Q9UHC9 MIR616-201ENST00000385293 97 ntBASIC0.39□□□□□ -2.35
NPC1L1Q9UHC9 AF228730.3-201ENST00000436691 102 ntBASIC0.39□□□□□ -2.35
NPC1L1Q9UHC9 RNU7-80P-201ENST00000459562 61 ntBASIC0.39□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-570P-201ENST00000517051 105 ntBASIC0.39□□□□□ -2.35
NPC1L1Q9UHC9 MIR335-201ENST00000362173 94 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.82-201ENST00000363000 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.92-201ENST00000363043 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-1309P-201ENST00000363305 108 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.199-201ENST00000364014 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.216-201ENST00000364205 93 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.235-201ENST00000364412 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.306-201ENST00000365015 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.312-201ENST00000365089 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.322-201ENST00000365151 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.422-201ENST00000384054 114 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.440-201ENST00000384120 114 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.454-201ENST00000384224 113 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.650-201ENST00000459002 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 RNU7-185P-201ENST00000459215 60 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.777-201ENST00000516982 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 AP003327.1-201ENST00000529684 127 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.771-201ENST00000598668 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 uc_338.16-201ENST00000621804 95 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.789-201ENST00000622480 102 ntBASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.38□□□□□ -2.35
NPC1L1Q9UHC9 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-35P-201ENST00000384530 107 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.542-201ENST00000384641 111 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.590-201ENST00000410140 107 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 AC015818.7-201ENST00000428754 109 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 AC087499.7-201ENST00000441958 109 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 MTND5P22-201ENST00000458380 195 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 SNORD2.1-201ENST00000458762 69 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.679-201ENST00000516416 91 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 AC090897.1-201ENST00000580909 226 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 U2.14-201ENST00000615943 113 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-740P-201ENST00000364734 105 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.351-201ENST00000365436 96 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.572-201ENST00000384757 98 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-1109P-201ENST00000391187 107 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 AL606845.1-201ENST00000404881 255 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 SNORD100-201ENST00000408573 76 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.622-201ENST00000411091 108 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 RPL39P25-201ENST00000449384 154 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 AL138752.1-201ENST00000452964 351 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 SNRPGP8-201ENST00000454064 226 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.701-201ENST00000516812 110 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 RNU7-156P-201ENST00000517214 74 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 MIR3152-201ENST00000579801 74 ntBASIC0.36□□□□□ -2.35
NPC1L1Q9UHC9 MIR342-201ENST00000362212 99 ntBASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.91-201ENST00000363042 107 ntBASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.117-201ENST00000363294 101 ntBASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 MIR563-201ENST00000385080 79 ntBASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 RNA5SP285-201ENST00000516619 119 ntBASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 SNORD92-201ENST00000585078 85 ntBASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.35□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.11-201ENST00000362375 109 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 Y_RNA.237-201ENST00000364439 102 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 RNA5SP117-201ENST00000365294 118 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-728P-201ENST00000365375 104 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 SNORD71-201ENST00000411292 86 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 RNU7-102P-201ENST00000458948 62 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 RNU6-1137P-201ENST00000517073 99 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 AP001282.2-201ENST00000616149 309 ntBASIC0.34□□□□□ -2.35
NPC1L1Q9UHC9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.304-201ENST00000365011 112 ntBASIC0.33□□□□□ -2.36
NPC1L1Q9UHC9 MT-TT-201ENST00000387460 66 ntBASIC0.33□□□□□ -2.36
NPC1L1Q9UHC9 MIR1302-6-201ENST00000408466 90 ntBASIC0.33□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.618-201ENST00000410949 107 ntBASIC0.33□□□□□ -2.36
NPC1L1Q9UHC9 MTCYBP6-201ENST00000441810 138 ntBASIC0.33□□□□□ -2.36
NPC1L1Q9UHC9 MIR6717-201ENST00000622747 73 ntBASIC0.33□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-653P-201ENST00000363074 106 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-1227P-201ENST00000383981 107 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 RNA5SP237-201ENST00000410414 113 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 Y_RNA.604-201ENST00000410574 102 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 RNU7-70P-201ENST00000516941 66 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-448P-201ENST00000517052 107 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 uc_338.6-201ENST00000613544 171 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-103P-201ENST00000363686 107 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 RNU4-17P-201ENST00000365598 141 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-1292P-201ENST00000383856 107 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 SNORA20-201ENST00000384662 132 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 SNORD12C-201ENST00000386307 89 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 RNU6-679P-201ENST00000391003 106 ntBASIC0.32□□□□□ -2.36
NPC1L1Q9UHC9 SNORA25.12-201ENST00000516202 82 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 287.9 ms