Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNU6-241P-201ENST00000391148 104 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 MIR938-201ENST00000401216 83 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.618-201ENST00000410949 107 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 MTCYBP9-201ENST00000431021 303 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.679-201ENST00000516416 91 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 MIR4744-201ENST00000581563 82 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 MIR5087-201ENST00000635826 76 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 U6.104-201ENST00000637979 90 ntBASIC0.36□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.7-201ENST00000362352 102 ntBASIC0.35□□□□□ -2.35
HDHD3Q9BSH5 SNORA63-201ENST00000363450 132 ntBASIC0.35□□□□□ -2.35
HDHD3Q9BSH5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
HDHD3Q9BSH5 RNU6-578P-201ENST00000390980 103 ntBASIC0.35□□□□□ -2.35
HDHD3Q9BSH5 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
HDHD3Q9BSH5 RNU7-102P-201ENST00000458948 62 ntBASIC0.35□□□□□ -2.35
HDHD3Q9BSH5 MIR4308-201ENST00000580634 81 ntBASIC0.35□□□□□ -2.35
HDHD3Q9BSH5 AL360085.1-201ENST00000604713 532 ntBASIC0.35□□□□□ -2.35
HDHD3Q9BSH5 MIR8066-201ENST00000617280 78 ntBASIC0.35□□□□□ -2.35
HDHD3Q9BSH5 Y_RNA.20-201ENST00000362479 113 ntBASIC0.34□□□□□ -2.36
HDHD3Q9BSH5 RNU4-45P-201ENST00000365469 141 ntBASIC0.34□□□□□ -2.36
HDHD3Q9BSH5 MIR1276-201ENST00000408707 83 ntBASIC0.34□□□□□ -2.36
HDHD3Q9BSH5 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
HDHD3Q9BSH5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.34□□□□□ -2.36
HDHD3Q9BSH5 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.680-201ENST00000516441 93 ntBASIC0.34□□□□□ -2.36
HDHD3Q9BSH5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.34□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.149-201ENST00000363558 117 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.191-201ENST00000363972 113 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.269-201ENST00000364685 89 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 SNORA36.2-201ENST00000384004 127 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 MTND2P23-201ENST00000422990 651 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 RNU6-1132P-201ENST00000459214 107 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 RNU7-80P-201ENST00000459562 61 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 RNU7-156P-201ENST00000517214 74 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 MRPS18CP4-201ENST00000535821 231 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 MIR378D2-201ENST00000580636 98 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 AL662814.1-201ENST00000617364 121 ntBASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HDHD3Q9BSH5 MIR342-201ENST00000362212 99 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.42-201ENST00000362660 108 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.121-201ENST00000363309 113 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.288-201ENST00000364854 92 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.308-201ENST00000365043 101 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 SNORA25.9-201ENST00000365087 128 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.459-201ENST00000384251 102 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 MIR624-201ENST00000385217 97 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 MIR548H3-201ENST00000408771 118 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 AC092628.1-201ENST00000436250 252 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 SCARNA15.1-201ENST00000516384 125 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 AL078603.1-201ENST00000603824 313 ntBASIC0.32□□□□□ -2.36
HDHD3Q9BSH5 RNA5SP347-201ENST00000362445 119 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.54-201ENST00000362766 105 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 RNY1-201ENST00000364228 113 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.238-201ENST00000364441 102 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.354-201ENST00000365448 111 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 RNU6-342P-201ENST00000384521 104 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 RNU6-1011P-201ENST00000384668 107 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 U8.15-201ENST00000390947 134 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.588-201ENST00000391254 102 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 MIR1257-201ENST00000408490 117 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.626-201ENST00000411288 95 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 SNORD116-25-201ENST00000516517 92 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 RNU6-1258P-201ENST00000516911 111 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 RNU2-4P-201ENST00000606190 192 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 AC021613.1-201ENST00000623880 111 ntBASIC0.31□□□□□ -2.36
HDHD3Q9BSH5 MIR302B-201ENST00000362188 73 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.454-201ENST00000384224 113 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.556-201ENST00000384677 113 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-493P-201ENST00000391321 108 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 MIR548J-201ENST00000408833 112 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-447P-201ENST00000410293 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-355P-201ENST00000410427 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-791P-201ENST00000410467 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNA5SP261-201ENST00000410536 106 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-705P-201ENST00000410601 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-860P-201ENST00000410860 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNU6-785P-201ENST00000411324 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 AL121914.1-201ENST00000450188 156 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 RNA5SP94-201ENST00000516917 108 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 AC141846.1-201ENST00000568348 142 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 MIR6504-201ENST00000613520 61 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 U6.90-201ENST00000614007 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 U6.70-201ENST00000620287 104 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 AL596211.1-201ENST00000569873 2277 ntBASIC0.3□□□□□ -2.36
HDHD3Q9BSH5 Y_RNA.571-201ENST00000384753 98 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 SNORA79-201ENST00000408376 140 ntBASIC0.29□□□□□ -2.36
HDHD3Q9BSH5 RNA5SP127-201ENST00000411051 133 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms