Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 RNA5SP261-201ENST00000410536 106 ntBASIC1.71□□□□□ -2.14
ZSWIM1Q9BR11 RNU6-893P-201ENST00000458841 100 ntBASIC1.71□□□□□ -2.14
ZSWIM1Q9BR11 SNORD13-201ENST00000459299 104 ntBASIC1.71□□□□□ -2.14
ZSWIM1Q9BR11 snoU13.16-201ENST00000459350 104 ntBASIC1.71□□□□□ -2.14
ZSWIM1Q9BR11 AL513534.2-201ENST00000603836 250 ntBASIC1.71□□□□□ -2.14
ZSWIM1Q9BR11 Y_RNA.4-201ENST00000362333 112 ntBASIC1.7□□□□□ -2.14
ZSWIM1Q9BR11 RNA5SP190-201ENST00000365222 118 ntBASIC1.7□□□□□ -2.14
ZSWIM1Q9BR11 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
ZSWIM1Q9BR11 SNORA51.10-201ENST00000384418 136 ntBASIC1.7□□□□□ -2.14
ZSWIM1Q9BR11 MIR548A1-201ENST00000385041 97 ntBASIC1.7□□□□□ -2.14
ZSWIM1Q9BR11 SNORD41-201ENST00000386967 70 ntBASIC1.7□□□□□ -2.14
ZSWIM1Q9BR11 AL451046.2-201ENST00000403074 277 ntBASIC1.7□□□□□ -2.14
ZSWIM1Q9BR11 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.7□□□□□ -2.14
ZSWIM1Q9BR11 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.7□□□□□ -2.14
ZSWIM1Q9BR11 MIR302D-201ENST00000362275 68 ntBASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 MIR520C-201ENST00000385005 87 ntBASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 MT-TI-201ENST00000387365 69 ntBASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 SNORA17.3-201ENST00000391159 129 ntBASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 AL022718.1-201ENST00000412004 84 ntBASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 RNU6-1053P-201ENST00000515930 101 ntBASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 AC007012.1-201ENST00000567192 175 ntBASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 MIR3152-201ENST00000579801 74 ntBASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
ZSWIM1Q9BR11 MIR337-201ENST00000362281 93 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 SNORD115-2-201ENST00000362842 82 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 RNY4P6-201ENST00000363667 96 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 RNU6-153P-201ENST00000364422 104 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 SNORD115-20-201ENST00000365099 82 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 RNU6-1104P-201ENST00000384723 104 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 MIR1323-201ENST00000408090 73 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 RNU7-45P-201ENST00000459460 63 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 AC004812.1-201ENST00000540773 146 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 MIR502-201ENST00000606349 86 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 MIR8055-201ENST00000610739 97 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 MIR6717-201ENST00000622747 73 ntBASIC1.68□□□□□ -2.14
ZSWIM1Q9BR11 Y_RNA.531-201ENST00000384589 121 ntBASIC1.67□□□□□ -2.14
ZSWIM1Q9BR11 RNU6-1190P-201ENST00000410811 104 ntBASIC1.67□□□□□ -2.14
ZSWIM1Q9BR11 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.67□□□□□ -2.14
ZSWIM1Q9BR11 RPS23P4-201ENST00000487908 423 ntBASIC1.67□□□□□ -2.14
ZSWIM1Q9BR11 PDCD5P2-201ENST00000507570 312 ntBASIC1.67□□□□□ -2.14
ZSWIM1Q9BR11 SNORD111.1-201ENST00000516421 86 ntBASIC1.67□□□□□ -2.14
ZSWIM1Q9BR11 AC022523.2-201ENST00000561045 150 ntBASIC1.67□□□□□ -2.14
ZSWIM1Q9BR11 Z97988.1-201ENST00000637697 135 ntBASIC1.67□□□□□ -2.14
ZSWIM1Q9BR11 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
ZSWIM1Q9BR11 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 SNORA22.1-201ENST00000362701 134 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 MIR30A-201ENST00000385092 71 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 MIR759-201ENST00000390224 91 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 AL512326.2-201ENST00000426359 151 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 RNU7-41P-201ENST00000515917 61 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 RNU6-412P-201ENST00000516434 106 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 SNORA44.1-201ENST00000517031 108 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 MIR3163-201ENST00000581592 73 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 AP000942.3-201ENST00000603702 160 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 AL357312.1-201ENST00000603879 298 ntBASIC1.66□□□□□ -2.14
ZSWIM1Q9BR11 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.65□□□□□ -2.14
ZSWIM1Q9BR11 Y_RNA.85-201ENST00000363014 111 ntBASIC1.65□□□□□ -2.15
ZSWIM1Q9BR11 RNA5SP48-201ENST00000363969 126 ntBASIC1.65□□□□□ -2.15
ZSWIM1Q9BR11 MIR1287-201ENST00000408492 90 ntBASIC1.65□□□□□ -2.15
ZSWIM1Q9BR11 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.65□□□□□ -2.15
ZSWIM1Q9BR11 RNU6-1258P-201ENST00000516911 111 ntBASIC1.65□□□□□ -2.15
ZSWIM1Q9BR11 AL645939.4-201ENST00000604495 135 ntBASIC1.65□□□□□ -2.15
ZSWIM1Q9BR11 AL035470.1-201ENST00000622571 220 ntBASIC1.65□□□□□ -2.15
ZSWIM1Q9BR11 MIR4251-201ENST00000635819 61 ntBASIC1.65□□□□□ -2.15
ZSWIM1Q9BR11 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
ZSWIM1Q9BR11 SNORA63.4-201ENST00000362763 126 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.226-201ENST00000364337 114 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.299-201ENST00000364973 94 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.362-201ENST00000365518 110 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.549-201ENST00000384657 102 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 MIR548D2-201ENST00000384955 97 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 MIR320A-201ENST00000385302 82 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 SNORD12C-201ENST00000386307 89 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 AC113410.1-201ENST00000505029 247 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 RNU6-922P-201ENST00000516753 99 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 MIR4303-201ENST00000581299 66 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 GHRLOS.1-201ENST00000610995 70 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.64□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.171-201ENST00000363760 102 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 SNORA1.1-201ENST00000364671 133 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 SNORA22-201ENST00000383907 134 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 RPS3AP1-201ENST00000413190 320 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 HMGN1P33-201ENST00000432945 451 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 RNU7-113P-201ENST00000459273 62 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 AC005908.1-201ENST00000468701 347 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 MIR7111-201ENST00000619751 72 ntBASIC1.63□□□□□ -2.15
ZSWIM1Q9BR11 SNORD115-19-201ENST00000363098 82 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 SNORD115-18-201ENST00000363293 82 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 SNORD115-17-201ENST00000364612 82 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 Y_RNA.323-201ENST00000365157 109 ntBASIC1.62□□□□□ -2.15
ZSWIM1Q9BR11 HSPE1P24-201ENST00000450782 238 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms