Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNU6-690P-201ENST00000365242 106 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 SNORD28B-201ENST00000390993 75 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 AC009474.2-201ENST00000451383 136 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 RNU2-13P-201ENST00000515909 113 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 RNU6-240P-201ENST00000516098 97 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 RNU6-781P-201ENST00000516377 101 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 RNU7-43P-201ENST00000516554 64 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 IGKV1-22-201ENST00000524313 326 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 AL512310.8-201ENST00000550183 120 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.34□□□□□ -2.19
PKP4Q99569 U6.95-201ENST00000636931 70 ntBASIC1.34□□□□□ -2.19
PKP4Q99569 Y_RNA.366-201ENST00000365540 102 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 SNORA24-201ENST00000384096 131 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 Y_RNA.537-201ENST00000384626 109 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 MIRLET7F2-201ENST00000385277 83 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 AL451046.2-201ENST00000403074 277 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 AP1B1P2-201ENST00000416196 106 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 RNU7-67P-201ENST00000459003 62 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 RNU2-11P-201ENST00000459191 187 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 RNU7-53P-201ENST00000516705 60 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 RNU1-92P-201ENST00000517017 135 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 MIR4791-201ENST00000607666 84 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 AC243994.1-201ENST00000618627 109 ntBASIC1.33□□□□□ -2.2
PKP4Q99569 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
PKP4Q99569 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PKP4Q99569 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PKP4Q99569 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PKP4Q99569 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
PKP4Q99569 Y_RNA.346-201ENST00000365385 112 ntBASIC1.32□□□□□ -2.2
PKP4Q99569 RNU6-939P-201ENST00000384634 107 ntBASIC1.32□□□□□ -2.2
PKP4Q99569 RNA5SP136-201ENST00000410906 107 ntBASIC1.32□□□□□ -2.2
PKP4Q99569 Y_RNA.630-201ENST00000411370 108 ntBASIC1.32□□□□□ -2.2
PKP4Q99569 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.32□□□□□ -2.2
PKP4Q99569 RNU6-958P-201ENST00000516995 106 ntBASIC1.32□□□□□ -2.2
PKP4Q99569 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
PKP4Q99569 MIR4764-201ENST00000580680 88 ntBASIC1.32□□□□□ -2.2
PKP4Q99569 AC025166.1-201ENST00000612411 163 ntBASIC1.32□□□□□ -2.2
PKP4Q99569 RNY1P10-201ENST00000363268 113 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 Y_RNA.353-201ENST00000365440 108 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 RNU6-1056P-201ENST00000383996 107 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 MIR570-201ENST00000384917 97 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 MIR520C-201ENST00000385005 87 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 MIR1263-201ENST00000408324 86 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 RNU7-73P-201ENST00000458743 63 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 CYP3A52P-201ENST00000563326 91 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 AL513534.2-201ENST00000603836 250 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 AC021443.1-201ENST00000604478 211 ntBASIC1.31□□□□□ -2.2
PKP4Q99569 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PKP4Q99569 SNORA51.10-201ENST00000384418 136 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.3□□□□□ -2.2
PKP4Q99569 RNU6-1064P-201ENST00000410626 104 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 SNORA31.4-201ENST00000516049 129 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 MIR3664-201ENST00000579074 99 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 MIR4305-201ENST00000583252 102 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 HSPE1P19-201ENST00000603327 295 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 AL359821.1-201ENST00000605519 182 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 MIR8065-201ENST00000620577 100 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 AC021613.1-201ENST00000623880 111 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 AC008133.2-201ENST00000624540 351 ntBASIC1.3□□□□□ -2.2
PKP4Q99569 MTND5P18-201ENST00000445624 1801 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 RNU4-16P-201ENST00000364737 141 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 Y_RNA.528-201ENST00000384575 108 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 RNU6-476P-201ENST00000384726 107 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 MIR618-201ENST00000385287 98 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 SNORD41-201ENST00000386967 70 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
PKP4Q99569 RNA5SP261-201ENST00000410536 106 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.29□□□□□ -2.2
PKP4Q99569 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 snoU13.16-201ENST00000459350 104 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 COX6CP6-201ENST00000490840 228 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 SNORD33.1-201ENST00000516213 88 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 RNU6-922P-201ENST00000516753 99 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 MIR3152-201ENST00000579801 74 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 AL357312.1-201ENST00000603879 298 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 AL670379.3-201ENST00000605040 251 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
PKP4Q99569 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
PKP4Q99569 Y_RNA.298-201ENST00000364960 107 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 RNU6-1144P-201ENST00000384247 104 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 RNU6-1319P-201ENST00000390855 104 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 RNU6-747P-201ENST00000390928 104 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 RNU6-241P-201ENST00000391148 104 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 RNU6-177P-201ENST00000411257 104 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.28□□□□□ -2.2
PKP4Q99569 RNU6-893P-201ENST00000458841 100 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 RNU7-164P-201ENST00000459221 62 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.28□□□□□ -2.2
PKP4Q99569 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 RNY4P20-201ENST00000516678 93 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 MTND5P34-201ENST00000568888 325 ntBASIC1.28□□□□□ -2.2
PKP4Q99569 Y_RNA.4-201ENST00000362333 112 ntBASIC1.27□□□□□ -2.21
PKP4Q99569 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
PKP4Q99569 MIR548A3-201ENST00000385297 97 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 242.9 ms