Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 AC098479.1-201ENST00000609225 154 ntBASIC0.89□□□□□ -2.27
RTL3Q8N8U3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
RTL3Q8N8U3 MIR103A2-201ENST00000362154 78 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 SNORA25.3-201ENST00000363205 127 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 SNORA25.7-201ENST00000364375 127 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RNU6-886P-201ENST00000384319 105 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.555-201ENST00000384673 110 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RNU6-907P-201ENST00000390924 102 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RNU6-394P-201ENST00000410735 107 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 RPS3AP1-201ENST00000413190 320 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 SNORA4-201ENST00000584302 138 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 MIR8055-201ENST00000610739 97 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 SEPT14P17-201ENST00000617978 177 ntBASIC0.88□□□□□ -2.27
RTL3Q8N8U3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.87□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.272-201ENST00000364696 102 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 MT-TN-201ENST00000387400 73 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RNU6-913P-201ENST00000390913 95 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.580-201ENST00000391004 95 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RNU6-613P-201ENST00000410412 108 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 AL035398.1-201ENST00000430869 322 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 FABP5P4-201ENST00000437203 171 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RNU7-53P-201ENST00000516705 60 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 Z97988.1-201ENST00000637697 135 ntBASIC0.87□□□□□ -2.27
RTL3Q8N8U3 RNU6-1082P-201ENST00000364574 107 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 SNORD114-22-201ENST00000365423 72 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.357-201ENST00000365487 109 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 SNORA75.5-201ENST00000391291 81 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.86□□□□□ -2.27
RTL3Q8N8U3 RNU7-67P-201ENST00000459003 62 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 RNA5SP236-201ENST00000516169 116 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 RNU6-958P-201ENST00000516995 106 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 DNAJC19P2-201ENST00000593340 302 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 MIR6734-201ENST00000621166 68 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 AC091932.4-201ENST00000623386 200 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 MIR6516-201ENST00000630554 81 ntBASIC0.86□□□□□ -2.27
RTL3Q8N8U3 MIR377-201ENST00000362145 69 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.180-201ENST00000363867 113 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 RNU6-1336P-201ENST00000383886 109 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.521-201ENST00000384560 114 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 SNORA26.6-201ENST00000391256 115 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 MIR548I3-201ENST00000408378 149 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 RNU2-11P-201ENST00000459191 187 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 RNU7-80P-201ENST00000459562 61 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.52-201ENST00000362760 96 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.150-201ENST00000363562 102 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-580P-201ENST00000365159 107 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.351-201ENST00000365436 96 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 Y_RNA.454-201ENST00000384224 113 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-125P-201ENST00000384505 107 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 AC090844.1-201ENST00000422019 156 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 MIR2115-201ENST00000516657 100 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-1149P-201ENST00000516810 97 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 RNU6-1212P-201ENST00000517023 104 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.84□□□□□ -2.27
RTL3Q8N8U3 AC131055.1-201ENST00000584626 316 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 MIR3658-201ENST00000636291 56 ntBASIC0.84□□□□□ -2.27
RTL3Q8N8U3 MTND5P32-201ENST00000560711 1802 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 RNU6-654P-201ENST00000364373 107 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.251-201ENST00000364551 99 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 RNU6-396P-201ENST00000365369 105 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.497-201ENST00000384447 98 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 MIR548I1-201ENST00000408810 149 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 RNA5SP255-201ENST00000516370 107 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 MIR3668-201ENST00000582138 75 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 MIR6844-201ENST00000637122 62 ntBASIC0.83□□□□□ -2.28
RTL3Q8N8U3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.82□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.270-201ENST00000364693 104 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU6-818P-201ENST00000364837 108 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.430-201ENST00000384081 110 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.464-201ENST00000384282 110 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 MIR489-201ENST00000384923 84 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU6-588P-201ENST00000410281 105 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU6-602P-201ENST00000411155 105 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 AC244023.1-201ENST00000426884 112 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU7-197P-201ENST00000458836 62 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 RNU2-60P-201ENST00000517290 128 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 AC036111.3-201ENST00000526389 112 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 MIR4264-201ENST00000583520 66 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 AC242498.1-201ENST00000604134 111 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 MIR6841-201ENST00000637129 72 ntBASIC0.82□□□□□ -2.28
RTL3Q8N8U3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RTL3Q8N8U3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.81□□□□□ -2.28
RTL3Q8N8U3 RNY1P11-201ENST00000363759 113 ntBASIC0.81□□□□□ -2.28
RTL3Q8N8U3 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
RTL3Q8N8U3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.81□□□□□ -2.28
RTL3Q8N8U3 RNU6-747P-201ENST00000390928 104 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 263.7 ms