Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR548AO-201ENST00000579992 96 ntBASIC3.06□□□□□ -1.92
SCUBE3Q8IX30 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SCUBE3Q8IX30 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SCUBE3Q8IX30 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 MIR424-201ENST00000362227 98 ntBASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 SNORA25.9-201ENST00000365087 128 ntBASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 MIR520C-201ENST00000385005 87 ntBASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 RNU4-83P-201ENST00000410863 133 ntBASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 RNA5SP184-201ENST00000411071 108 ntBASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 AC125388.1-201ENST00000459631 156 ntBASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 RNA5SP481-201ENST00000516814 122 ntBASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 MIR4796-201ENST00000580742 81 ntBASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 AC092435.3-201ENST00000565538 3654 ntBASIC3.05□□□□□ -1.92
SCUBE3Q8IX30 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 SNORA9.2-201ENST00000365361 133 ntBASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 U8.9-201ENST00000365667 134 ntBASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 RNU6-851P-201ENST00000384565 107 ntBASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 HMGN2P3-201ENST00000433603 273 ntBASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 HMGN2P5-201ENST00000436882 273 ntBASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 AC027119.1-201ENST00000440877 241 ntBASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 Y_RNA.660-201ENST00000516002 120 ntBASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 SUB1P4-201ENST00000566062 339 ntBASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.04□□□□□ -1.92
SCUBE3Q8IX30 SNORA38-201ENST00000363946 132 ntBASIC3.03□□□□□ -1.92
SCUBE3Q8IX30 RNU6-296P-201ENST00000384608 107 ntBASIC3.03□□□□□ -1.92
SCUBE3Q8IX30 MIR627-201ENST00000384979 97 ntBASIC3.03□□□□□ -1.92
SCUBE3Q8IX30 MIR1283-2-201ENST00000408621 87 ntBASIC3.03□□□□□ -1.92
SCUBE3Q8IX30 AL139132.1-201ENST00000431587 344 ntBASIC3.03□□□□□ -1.92
SCUBE3Q8IX30 AC104389.3-201ENST00000445629 235 ntBASIC3.03□□□□□ -1.92
SCUBE3Q8IX30 Y_RNA.648-201ENST00000459455 110 ntBASIC3.03□□□□□ -1.92
SCUBE3Q8IX30 MIR4500-201ENST00000579472 76 ntBASIC3.03□□□□□ -1.92
SCUBE3Q8IX30 AC090897.1-201ENST00000580909 226 ntBASIC3.03□□□□□ -1.92
SCUBE3Q8IX30 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 AP006437.1-201ENST00000641440 3685 ntBASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 RNU6-161P-201ENST00000363051 106 ntBASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 RNU6-112P-201ENST00000363599 104 ntBASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 RNU6-949P-201ENST00000384040 107 ntBASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 SNORA48.1-201ENST00000390879 135 ntBASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 SNRPGP12-201ENST00000449481 213 ntBASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 RNA5SP137-201ENST00000516833 135 ntBASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 RNU6-850P-201ENST00000516934 103 ntBASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCUBE3Q8IX30 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 RNA5SP465-201ENST00000391195 109 ntBASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 MIR887-201ENST00000401258 79 ntBASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 AC019129.1-201ENST00000403786 261 ntBASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 RNA5SP508-201ENST00000411327 119 ntBASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 RPS27P21-201ENST00000486977 252 ntBASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 MIR3935-201ENST00000583472 104 ntBASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 AL662814.1-201ENST00000617364 121 ntBASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 MIR4251-201ENST00000635819 61 ntBASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCUBE3Q8IX30 Y_RNA.340-201ENST00000365330 92 ntBASIC3□□□□□ -1.93
SCUBE3Q8IX30 RNU1-148P-201ENST00000384472 162 ntBASIC3□□□□□ -1.93
SCUBE3Q8IX30 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3□□□□□ -1.93
SCUBE3Q8IX30 AP004217.1-201ENST00000480579 346 ntBASIC3□□□□□ -1.93
SCUBE3Q8IX30 FGF7P7-201ENST00000514120 227 ntBASIC3□□□□□ -1.93
SCUBE3Q8IX30 RNU6-448P-201ENST00000517052 107 ntBASIC3□□□□□ -1.93
SCUBE3Q8IX30 RNU6-1015P-201ENST00000517121 99 ntBASIC3□□□□□ -1.93
SCUBE3Q8IX30 MIR4319-201ENST00000577285 85 ntBASIC3□□□□□ -1.93
SCUBE3Q8IX30 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3□□□□□ -1.93
SCUBE3Q8IX30 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3□□□□□ -1.93
SCUBE3Q8IX30 MAPK10-266ENST00000641066 6555 ntBASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 WWP1P1-201ENST00000466609 2769 ntBASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 RNA5SP344-201ENST00000411081 104 ntBASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 RPS29P6-201ENST00000438196 145 ntBASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 RNU6-1108P-201ENST00000516308 104 ntBASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 MIR4536-1-201ENST00000583537 88 ntBASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
SCUBE3Q8IX30 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SCUBE3Q8IX30 AC062016.1-201ENST00000355719 319 ntBASIC2.98□□□□□ -1.93
SCUBE3Q8IX30 MIR512-1-201ENST00000384913 84 ntBASIC2.98□□□□□ -1.93
SCUBE3Q8IX30 AC105272.1-201ENST00000438604 198 ntBASIC2.98□□□□□ -1.93
SCUBE3Q8IX30 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.98□□□□□ -1.93
SCUBE3Q8IX30 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 RNU6-811P-201ENST00000384069 107 ntBASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 RNU6-571P-201ENST00000384128 107 ntBASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 AC023790.1-201ENST00000482174 347 ntBASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 RNU6-70P-201ENST00000516438 60 ntBASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 AC138749.4-201ENST00000563970 127 ntBASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SCUBE3Q8IX30 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCUBE3Q8IX30 SNORA72.6-201ENST00000384520 129 ntBASIC2.96□□□□□ -1.94
SCUBE3Q8IX30 MIR518A2-201ENST00000384966 87 ntBASIC2.96□□□□□ -1.94
SCUBE3Q8IX30 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SCUBE3Q8IX30 AC092427.1-202ENST00000430569 476 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms