Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 SNORD92-201ENST00000585078 85 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 AC044792.1-201ENST00000593294 196 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 U6.90-201ENST00000614007 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 U6.70-201ENST00000620287 104 ntBASIC0.4□□□□□ -2.35
CCDC83Q8IWF9 snoU2_19.4-201ENST00000364329 80 ntBASIC0.39□□□□□ -2.35
CCDC83Q8IWF9 RNA5SP261-201ENST00000410536 106 ntBASIC0.39□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.604-201ENST00000410574 102 ntBASIC0.39□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.622-201ENST00000411091 108 ntBASIC0.39□□□□□ -2.35
CCDC83Q8IWF9 RNU7-102P-201ENST00000458948 62 ntBASIC0.39□□□□□ -2.35
CCDC83Q8IWF9 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
CCDC83Q8IWF9 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.39□□□□□ -2.35
CCDC83Q8IWF9 MIR924-201ENST00000638017 53 ntBASIC0.39□□□□□ -2.35
CCDC83Q8IWF9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 MIR30D-201ENST00000362283 70 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.304-201ENST00000365011 112 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.542-201ENST00000384641 111 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 SNORD12C-201ENST00000386307 89 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 SNORA26.6-201ENST00000391256 115 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.590-201ENST00000410140 107 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 MIR4282-201ENST00000583613 67 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 AC008608.1-201ENST00000603910 127 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 AC092634.7-201ENST00000621022 103 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 MIR6717-201ENST00000622747 73 ntBASIC0.38□□□□□ -2.35
CCDC83Q8IWF9 MIR302B-201ENST00000362188 73 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.199-201ENST00000364014 102 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 RNU6-1227P-201ENST00000383981 107 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 SNORA1-201ENST00000384107 130 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 RNU6-651P-201ENST00000411040 105 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 AC002350.1-201ENST00000490759 375 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 RNU6-453P-201ENST00000516819 85 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 RNU7-156P-201ENST00000517214 74 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.37□□□□□ -2.35
CCDC83Q8IWF9 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.23-201ENST00000362496 106 ntBASIC0.36□□□□□ -2.35
CCDC83Q8IWF9 RNU6-381P-201ENST00000391259 108 ntBASIC0.36□□□□□ -2.35
CCDC83Q8IWF9 RNU7-80P-201ENST00000459562 61 ntBASIC0.36□□□□□ -2.35
CCDC83Q8IWF9 MIR5197-201ENST00000583721 112 ntBASIC0.36□□□□□ -2.35
CCDC83Q8IWF9 U6.104-201ENST00000637979 90 ntBASIC0.36□□□□□ -2.35
CCDC83Q8IWF9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
CCDC83Q8IWF9 MIR342-201ENST00000362212 99 ntBASIC0.35□□□□□ -2.35
CCDC83Q8IWF9 RNU6-653P-201ENST00000363074 106 ntBASIC0.35□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.351-201ENST00000365436 96 ntBASIC0.35□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.454-201ENST00000384224 113 ntBASIC0.35□□□□□ -2.35
CCDC83Q8IWF9 Y_RNA.679-201ENST00000516416 91 ntBASIC0.35□□□□□ -2.35
CCDC83Q8IWF9 AL365265.1-201ENST00000621045 234 ntBASIC0.35□□□□□ -2.35
CCDC83Q8IWF9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CCDC83Q8IWF9 RNU6-1292P-201ENST00000383856 107 ntBASIC0.34□□□□□ -2.36
CCDC83Q8IWF9 Y_RNA.422-201ENST00000384054 114 ntBASIC0.34□□□□□ -2.36
CCDC83Q8IWF9 Y_RNA.430-201ENST00000384081 110 ntBASIC0.34□□□□□ -2.36
CCDC83Q8IWF9 Y_RNA.518-201ENST00000384552 113 ntBASIC0.34□□□□□ -2.36
CCDC83Q8IWF9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
CCDC83Q8IWF9 SNORA79-201ENST00000408376 140 ntBASIC0.34□□□□□ -2.36
CCDC83Q8IWF9 MIR376A2-201ENST00000636782 80 ntBASIC0.34□□□□□ -2.36
CCDC83Q8IWF9 RNU6-728P-201ENST00000365375 104 ntBASIC0.33□□□□□ -2.36
CCDC83Q8IWF9 RNU4-43P-201ENST00000410628 137 ntBASIC0.33□□□□□ -2.36
CCDC83Q8IWF9 Y_RNA.618-201ENST00000410949 107 ntBASIC0.33□□□□□ -2.36
CCDC83Q8IWF9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC83Q8IWF9 RNU6-448P-201ENST00000517052 107 ntBASIC0.33□□□□□ -2.36
CCDC83Q8IWF9 MIR3129-201ENST00000581095 76 ntBASIC0.33□□□□□ -2.36
CCDC83Q8IWF9 AL365205.2-201ENST00000594586 68 ntBASIC0.33□□□□□ -2.36
CCDC83Q8IWF9 MIR8062-201ENST00000621515 85 ntBASIC0.33□□□□□ -2.36
CCDC83Q8IWF9 MIR330-201ENST00000362196 94 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 RNA5SP517-201ENST00000364724 117 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 RNU4-17P-201ENST00000365598 141 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 MIR518A1-201ENST00000385068 85 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 RNU6-679P-201ENST00000391003 106 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 MIR1302-6-201ENST00000408466 90 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 SNORA40.8-201ENST00000411034 126 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 SNORD71-201ENST00000411292 86 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 RNU6-635P-201ENST00000516651 102 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 RNA5SP94-201ENST00000516917 108 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 AL442663.2-201ENST00000554385 511 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 MIR3152-201ENST00000579801 74 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 uc_338.16-201ENST00000621804 95 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 AC091932.4-201ENST00000623386 200 ntBASIC0.32□□□□□ -2.36
CCDC83Q8IWF9 Y_RNA.11-201ENST00000362375 109 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 RNU6-103P-201ENST00000363686 107 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 Y_RNA.176-201ENST00000363815 109 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 RNA5SP117-201ENST00000365294 118 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 Y_RNA.512-201ENST00000384518 102 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 RNU7-45P-201ENST00000459460 63 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 SNORA25.12-201ENST00000516202 82 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 AL662814.1-201ENST00000617364 121 ntBASIC0.31□□□□□ -2.36
CCDC83Q8IWF9 Y_RNA.483-201ENST00000384380 101 ntBASIC0.3□□□□□ -2.36
CCDC83Q8IWF9 MT-TW-201ENST00000387382 68 ntBASIC0.3□□□□□ -2.36
CCDC83Q8IWF9 SNORD93-201ENST00000408813 74 ntBASIC0.3□□□□□ -2.36
CCDC83Q8IWF9 RNA5SP237-201ENST00000410414 113 ntBASIC0.3□□□□□ -2.36
CCDC83Q8IWF9 RNU6-561P-201ENST00000516222 102 ntBASIC0.3□□□□□ -2.36
CCDC83Q8IWF9 AP003327.1-201ENST00000529684 127 ntBASIC0.3□□□□□ -2.36
CCDC83Q8IWF9 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms