Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 Y_RNA.354-201ENST00000365448 111 ntBASIC0.78□□□□□ -2.28
LDB1Q86U70 Y_RNA.489-201ENST00000384410 101 ntBASIC0.78□□□□□ -2.28
LDB1Q86U70 SNORD99-201ENST00000408612 74 ntBASIC0.78□□□□□ -2.28
LDB1Q86U70 RPS26P5-201ENST00000418544 335 ntBASIC0.78□□□□□ -2.28
LDB1Q86U70 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
LDB1Q86U70 Z83818.1-201ENST00000603584 150 ntBASIC0.78□□□□□ -2.28
LDB1Q86U70 MIR411-201ENST00000362239 96 ntBASIC0.77□□□□□ -2.29
LDB1Q86U70 Y_RNA.83-201ENST00000363005 113 ntBASIC0.77□□□□□ -2.29
LDB1Q86U70 SNORD105-201ENST00000386910 85 ntBASIC0.77□□□□□ -2.29
LDB1Q86U70 RNU6-1190P-201ENST00000410811 104 ntBASIC0.77□□□□□ -2.29
LDB1Q86U70 RNA5SP127-201ENST00000411051 133 ntBASIC0.77□□□□□ -2.29
LDB1Q86U70 SEPT7P4-201ENST00000437076 306 ntBASIC0.77□□□□□ -2.29
LDB1Q86U70 snoU13.21-201ENST00000459368 105 ntBASIC0.77□□□□□ -2.29
LDB1Q86U70 RNU7-70P-201ENST00000516941 66 ntBASIC0.77□□□□□ -2.29
LDB1Q86U70 AC091932.4-201ENST00000623386 200 ntBASIC0.77□□□□□ -2.29
LDB1Q86U70 Y_RNA.435-201ENST00000384095 112 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 RNU6-918P-201ENST00000391219 106 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 SNORD83.1-201ENST00000411362 77 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 snoU13.2-201ENST00000459201 104 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 MIR3152-201ENST00000579801 74 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 AL078603.1-201ENST00000603824 313 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 AC009779.6-201ENST00000603972 165 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 MIR6740-201ENST00000618268 113 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 MIR6717-201ENST00000622747 73 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 U6.106-201ENST00000636360 105 ntBASIC0.76□□□□□ -2.29
LDB1Q86U70 AL596211.1-201ENST00000569873 2277 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 RNU6-369P-201ENST00000362515 102 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 Y_RNA.116-201ENST00000363292 103 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LDB1Q86U70 Y_RNA.412-201ENST00000384001 104 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 MIR588-201ENST00000384900 83 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 MIR624-201ENST00000385217 97 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 SNORA26.6-201ENST00000391256 115 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 MIR18B-201ENST00000454574 71 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 RNU6-977P-201ENST00000516411 103 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 MRPS18CP4-201ENST00000535821 231 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 MIR4771-2-201ENST00000577758 74 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 MIR4771-1-201ENST00000582617 74 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 AC104465.1-201ENST00000611365 139 ntBASIC0.75□□□□□ -2.29
LDB1Q86U70 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
LDB1Q86U70 RNU6-1020P-201ENST00000363684 107 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 SNORA25.7-201ENST00000364375 127 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 RNU6-110P-201ENST00000384508 104 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 RNU6-1319P-201ENST00000390855 104 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 RNU6-747P-201ENST00000390928 104 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 RNU6-241P-201ENST00000391148 104 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 RNU6-177P-201ENST00000411257 104 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 RNU6-1271P-201ENST00000517049 105 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 MIR6788-201ENST00000618842 66 ntBASIC0.74□□□□□ -2.29
LDB1Q86U70 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.74□□□□□ -2.29
LDB1Q86U70 Y_RNA.188-201ENST00000363952 111 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 RNU1-133P-201ENST00000364867 167 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 RNU6-47P-201ENST00000383866 107 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 MIR518E-201ENST00000385252 88 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 snosnR66.1-201ENST00000391095 99 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 RNU6-1165P-201ENST00000410119 107 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 RNU7-45P-201ENST00000459460 63 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 RNA5SP220-201ENST00000516298 104 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 MIR4431-201ENST00000579990 94 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 MIR6734-201ENST00000621166 68 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 MIR6866-201ENST00000638146 69 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 AC010332.2-201ENST00000613083 1904 ntBASIC0.73□□□□□ -2.29
LDB1Q86U70 AC023934.1-201ENST00000574529 2389 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 Y_RNA.401-201ENST00000383965 117 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 Y_RNA.430-201ENST00000384081 110 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 Y_RNA.521-201ENST00000384560 114 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 SNORA20-201ENST00000384662 132 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 MIR520F-201ENST00000384824 87 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 SNORD12C-201ENST00000386307 89 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 RNU1-119P-201ENST00000391122 165 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 MIR548J-201ENST00000408833 112 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 AC130289.1-201ENST00000577321 73 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 AC011195.1-201ENST00000578177 177 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 MIR151B-201ENST00000584249 96 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 uc_338.6-201ENST00000613544 171 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 RMST_2.1-201ENST00000617263 136 ntBASIC0.72□□□□□ -2.29
LDB1Q86U70 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
LDB1Q86U70 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
LDB1Q86U70 RNU6-312P-201ENST00000364629 107 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 RNU6-597P-201ENST00000365620 102 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 MIR563-201ENST00000385080 79 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 AC015818.7-201ENST00000428754 109 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 AC087499.7-201ENST00000441958 109 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.71□□□□□ -2.3
LDB1Q86U70 SCARNA15-202ENST00000516881 127 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 MIR4804-201ENST00000581683 73 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 MIR4676-201ENST00000583078 72 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 SNORA4-201ENST00000584302 138 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 AC078938.1-201ENST00000620993 318 ntBASIC0.71□□□□□ -2.3
LDB1Q86U70 RNU6-379P-201ENST00000363813 104 ntBASIC0.7□□□□□ -2.3
LDB1Q86U70 Y_RNA.274-201ENST00000364714 101 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 399.8 ms