Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-439P-201ENST00000384188 106 ntBASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 MIR194-1-201ENST00000384892 85 ntBASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 AC004941.2-201ENST00000427009 228 ntBASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 SNORD53-201ENST00000579969 78 ntBASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 AC245884.12-201ENST00000615364 59 ntBASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 AL512310.12-203ENST00000640543 90 ntBASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 AC091304.10-201ENST00000641554 121 ntBASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RNF111Q6ZNA4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 RNA5SP259-201ENST00000365541 109 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 RNU6-1201P-201ENST00000384227 107 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 SNORA18-201ENST00000384416 132 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 Y_RNA.659-201ENST00000515994 113 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 RNU6-162P-201ENST00000516228 103 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 MIR548AO-201ENST00000579992 96 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 MIR5694-201ENST00000581190 76 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 MIR8065-201ENST00000620577 100 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 Z97988.1-201ENST00000637697 135 ntBASIC2.1□□□□□ -2.07
RNF111Q6ZNA4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 Y_RNA.290-201ENST00000364879 114 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 RNU6-1134P-201ENST00000365156 101 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 RNU6-602P-201ENST00000411155 105 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 RNU7-41P-201ENST00000515917 61 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 RNU6-322P-201ENST00000516010 103 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 AC026421.1-201ENST00000519101 163 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 CYP3A52P-201ENST00000563326 91 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 AC062037.1-201ENST00000605302 128 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 MIR6873-201ENST00000622788 63 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 MIR4251-201ENST00000635819 61 ntBASIC2.09□□□□□ -2.07
RNF111Q6ZNA4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
RNF111Q6ZNA4 SNORD45B-201ENST00000364617 72 ntBASIC2.08□□□□□ -2.08
RNF111Q6ZNA4 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
RNF111Q6ZNA4 MIR513A1-201ENST00000385138 129 ntBASIC2.08□□□□□ -2.08
RNF111Q6ZNA4 AC090844.1-201ENST00000422019 156 ntBASIC2.08□□□□□ -2.08
RNF111Q6ZNA4 AL356320.1-201ENST00000429616 163 ntBASIC2.08□□□□□ -2.08
RNF111Q6ZNA4 RNU6-1018P-201ENST00000516577 106 ntBASIC2.08□□□□□ -2.08
RNF111Q6ZNA4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNF111Q6ZNA4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNF111Q6ZNA4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 SNORD115-35-201ENST00000365122 82 ntBASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 Y_RNA.354-201ENST00000365448 111 ntBASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 Y_RNA.377-201ENST00000365644 108 ntBASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 RNU7-2P-201ENST00000516096 62 ntBASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 MIR4777-201ENST00000583710 86 ntBASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 U7.3-201ENST00000616123 62 ntBASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.07□□□□□ -2.08
RNF111Q6ZNA4 RNU6-1313P-201ENST00000362622 102 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 Y_RNA.95-201ENST00000363079 95 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 RNU6-60P-201ENST00000364792 103 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 RNU6-1237P-201ENST00000384777 107 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 MIR206-201ENST00000384872 86 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 MIR653-201ENST00000385279 96 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 RNU6-1307P-201ENST00000391012 103 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 AL451046.2-201ENST00000403074 277 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 AC019129.1-201ENST00000403786 261 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 RNU6-1086P-201ENST00000410930 100 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 AL161935.2-201ENST00000414627 60 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 AC108729.3-201ENST00000513484 108 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 RNU7-35P-201ENST00000517174 62 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 MIR6840-201ENST00000611937 71 ntBASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.06□□□□□ -2.08
RNF111Q6ZNA4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 RNA5SP425-201ENST00000410336 112 ntBASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 AC096949.1-201ENST00000412047 152 ntBASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 RPL31P63-201ENST00000422565 375 ntBASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 JTBP1-201ENST00000441314 247 ntBASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 SNORD111.1-201ENST00000516421 86 ntBASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 RNU6-922P-201ENST00000516753 99 ntBASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 AC022254.1-201ENST00000567857 235 ntBASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 AC096720.1-201ENST00000604441 183 ntBASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
RNF111Q6ZNA4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 MIR494-201ENST00000349529 81 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 Y_RNA.247-201ENST00000364500 92 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 SNORA16B-201ENST00000364674 135 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 Y_RNA.467-201ENST00000384297 102 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 MIR450A2-201ENST00000385022 100 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 SNORA3.2-201ENST00000408221 125 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 Z98742.3-201ENST00000418637 326 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 AC009474.2-201ENST00000451383 136 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 UBL5P1-201ENST00000507979 193 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 RNU7-79P-201ENST00000516082 62 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 SNORD67.1-201ENST00000516618 108 ntBASIC2.04□□□□□ -2.08
RNF111Q6ZNA4 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms