Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 MIR548I3-201ENST00000408378 149 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 RNU6-1165P-201ENST00000410119 107 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 MIR18B-201ENST00000454574 71 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.650-201ENST00000459002 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 RNU7-185P-201ENST00000459215 60 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 RNU7-96P-201ENST00000459535 64 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 RNA5SP153-201ENST00000516498 76 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 RNU6-635P-201ENST00000516651 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.777-201ENST00000516982 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 MIR4643-201ENST00000577473 78 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.771-201ENST00000598668 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 AL162730.1-201ENST00000605734 292 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.789-201ENST00000622480 102 ntBASIC0.25□□□□□ -2.37
TNFRSF9Q07011 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
TNFRSF9Q07011 MIR335-201ENST00000362173 94 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 MIR30D-201ENST00000362283 70 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 SNORA63C-201ENST00000364578 129 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.351-201ENST00000365436 96 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 RNY3P5-201ENST00000384127 102 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.483-201ENST00000384380 101 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 MIR125B2-201ENST00000385128 89 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 SNORA26.6-201ENST00000391256 115 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 SNORA26-201ENST00000391286 122 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 RNU7-102P-201ENST00000458948 62 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.24□□□□□ -2.37
TNFRSF9Q07011 MIR3129-201ENST00000581095 76 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 MIR4282-201ENST00000583613 67 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 AC097639.2-201ENST00000603159 172 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 U2.14-201ENST00000615943 113 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 MIR6717-201ENST00000622747 73 ntBASIC0.24□□□□□ -2.37
TNFRSF9Q07011 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.24□□□□□ -2.37
TNFRSF9Q07011 RNU6-653P-201ENST00000363074 106 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-713P-201ENST00000384761 107 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 MIR563-201ENST00000385080 79 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-1319P-201ENST00000390855 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-747P-201ENST00000390928 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-679P-201ENST00000391003 106 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-241P-201ENST00000391148 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 MIR1302-6-201ENST00000408466 90 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.590-201ENST00000410140 107 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-447P-201ENST00000410293 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-1118P-201ENST00000410382 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-1076P-201ENST00000410397 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-355P-201ENST00000410427 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-791P-201ENST00000410467 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-705P-201ENST00000410601 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-1100P-201ENST00000410691 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-860P-201ENST00000410860 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-1217P-201ENST00000411276 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU6-785P-201ENST00000411324 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.23□□□□□ -2.37
TNFRSF9Q07011 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.23□□□□□ -2.37
TNFRSF9Q07011 SNORA68.3-201ENST00000515906 83 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RN7SKP12-201ENST00000516275 143 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.679-201ENST00000516416 91 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 SNORA62.5-201ENST00000516634 120 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 RNU7-156P-201ENST00000517214 74 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 AP003072.1-201ENST00000531740 145 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 U6.90-201ENST00000614007 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 U6.70-201ENST00000620287 104 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 MIR8062-201ENST00000621515 85 ntBASIC0.23□□□□□ -2.37
TNFRSF9Q07011 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
TNFRSF9Q07011 MIR302B-201ENST00000362188 73 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.85-201ENST00000363014 111 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 RNU6-597P-201ENST00000365620 102 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 RNU6-472P-201ENST00000384299 107 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 RNU6-364P-201ENST00000384387 107 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 RNU6-381P-201ENST00000391259 108 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 SNORD100-201ENST00000408573 76 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.22□□□□□ -2.37
TNFRSF9Q07011 AC002350.1-201ENST00000490759 375 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.720-201ENST00000517166 92 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.22□□□□□ -2.37
TNFRSF9Q07011 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.22□□□□□ -2.37
TNFRSF9Q07011 AC090897.1-201ENST00000580909 226 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 SNORD92-201ENST00000585078 85 ntBASIC0.22□□□□□ -2.37
TNFRSF9Q07011 Y_RNA.76-201ENST00000362931 109 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.277-201ENST00000364754 102 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.422-201ENST00000384054 114 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.461-201ENST00000384263 103 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 MIR1257-201ENST00000408490 117 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.618-201ENST00000410949 107 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 RNA5SP127-201ENST00000411051 133 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.21□□□□□ -2.38
TNFRSF9Q07011 AC023932.2-201ENST00000603176 175 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 MIR2909-201ENST00000617113 69 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 AL109933.3-201ENST00000619095 188 ntBASIC0.21□□□□□ -2.38
TNFRSF9Q07011 MIRLET7D-201ENST00000362263 87 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.54-201ENST00000362766 105 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.176-201ENST00000363815 109 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 RNA5SP517-201ENST00000364724 117 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.326-201ENST00000365176 113 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 RNU6-728P-201ENST00000365375 104 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.374-201ENST00000365606 101 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.396-201ENST00000383949 103 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 RNU6-1160P-201ENST00000384546 104 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.574-201ENST00000384766 95 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms