Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MIR6766-201ENST00000622641 72 ntBASIC2.19□□□□□ -2.06
YBX1P67809 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
YBX1P67809 SNORD114-1-201ENST00000362705 72 ntBASIC2.18□□□□□ -2.06
YBX1P67809 RNU6-112P-201ENST00000363599 104 ntBASIC2.18□□□□□ -2.06
YBX1P67809 Y_RNA.164-201ENST00000363709 102 ntBASIC2.18□□□□□ -2.06
YBX1P67809 RNY1P1-201ENST00000364372 112 ntBASIC2.18□□□□□ -2.06
YBX1P67809 RNU6-1201P-201ENST00000384227 107 ntBASIC2.18□□□□□ -2.06
YBX1P67809 RNU6-1067P-201ENST00000384752 107 ntBASIC2.18□□□□□ -2.06
YBX1P67809 MIR526A1-201ENST00000384897 85 ntBASIC2.18□□□□□ -2.06
YBX1P67809 MIR221-201ENST00000385135 110 ntBASIC2.18□□□□□ -2.06
YBX1P67809 MIR660-201ENST00000385235 97 ntBASIC2.18□□□□□ -2.06
YBX1P67809 RNA5SP501-201ENST00000410990 112 ntBASIC2.18□□□□□ -2.06
YBX1P67809 snoU13.27-201ENST00000459278 104 ntBASIC2.18□□□□□ -2.06
YBX1P67809 MIR1270-201ENST00000459320 83 ntBASIC2.18□□□□□ -2.06
YBX1P67809 RNU6-638P-201ENST00000516582 104 ntBASIC2.18□□□□□ -2.06
YBX1P67809 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
YBX1P67809 AL513423.1-201ENST00000621695 132 ntBASIC2.18□□□□□ -2.06
YBX1P67809 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
YBX1P67809 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
YBX1P67809 Y_RNA.95-201ENST00000363079 95 ntBASIC2.17□□□□□ -2.06
YBX1P67809 Y_RNA.96-201ENST00000363092 109 ntBASIC2.17□□□□□ -2.06
YBX1P67809 SNORA3A-201ENST00000364113 130 ntBASIC2.17□□□□□ -2.06
YBX1P67809 Y_RNA.219-201ENST00000364232 113 ntBASIC2.17□□□□□ -2.06
YBX1P67809 Y_RNA.377-201ENST00000365644 108 ntBASIC2.17□□□□□ -2.06
YBX1P67809 Y_RNA.430-201ENST00000384081 110 ntBASIC2.17□□□□□ -2.06
YBX1P67809 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
YBX1P67809 SNORD23.1-201ENST00000408212 104 ntBASIC2.17□□□□□ -2.06
YBX1P67809 BTF3P4-201ENST00000418852 495 ntBASIC2.17□□□□□ -2.06
YBX1P67809 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
YBX1P67809 RNU6-1018P-201ENST00000516577 106 ntBASIC2.17□□□□□ -2.06
YBX1P67809 RNA5SP481-201ENST00000516814 122 ntBASIC2.17□□□□□ -2.06
YBX1P67809 MIR1273D-201ENST00000577266 86 ntBASIC2.17□□□□□ -2.06
YBX1P67809 FAM106DP-201ENST00000586416 501 ntBASIC2.17□□□□□ -2.06
YBX1P67809 AC096720.1-201ENST00000604441 183 ntBASIC2.17□□□□□ -2.06
YBX1P67809 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.17□□□□□ -2.06
YBX1P67809 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
YBX1P67809 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
YBX1P67809 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
YBX1P67809 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
YBX1P67809 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
YBX1P67809 SNORA6-201ENST00000384033 151 ntBASIC2.16□□□□□ -2.06
YBX1P67809 RNU6-296P-201ENST00000384608 107 ntBASIC2.16□□□□□ -2.06
YBX1P67809 SNORD78.1-201ENST00000390866 65 ntBASIC2.16□□□□□ -2.06
YBX1P67809 HMGN1P33-201ENST00000432945 451 ntBASIC2.16□□□□□ -2.06
YBX1P67809 AC109327.2-201ENST00000448339 378 ntBASIC2.16□□□□□ -2.06
YBX1P67809 Y_RNA.685-201ENST00000516532 108 ntBASIC2.16□□□□□ -2.06
YBX1P67809 SNORA31.25-201ENST00000517242 134 ntBASIC2.16□□□□□ -2.06
YBX1P67809 AL049779.4-201ENST00000604500 156 ntBASIC2.16□□□□□ -2.06
YBX1P67809 Y_RNA.190-201ENST00000363964 101 ntBASIC2.15□□□□□ -2.07
YBX1P67809 Y_RNA.467-201ENST00000384297 102 ntBASIC2.15□□□□□ -2.07
YBX1P67809 Y_RNA.537-201ENST00000384626 109 ntBASIC2.15□□□□□ -2.07
YBX1P67809 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
YBX1P67809 RPL23AP6-201ENST00000446637 472 ntBASIC2.15□□□□□ -2.07
YBX1P67809 AC022137.1-201ENST00000483735 151 ntBASIC2.15□□□□□ -2.07
YBX1P67809 AC099513.1-201ENST00000490423 301 ntBASIC2.15□□□□□ -2.07
YBX1P67809 RNU7-193P-201ENST00000516723 65 ntBASIC2.15□□□□□ -2.07
YBX1P67809 Y_RNA.705-201ENST00000516862 110 ntBASIC2.15□□□□□ -2.07
YBX1P67809 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
YBX1P67809 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
YBX1P67809 RNU6-457P-201ENST00000363999 107 ntBASIC2.14□□□□□ -2.07
YBX1P67809 SNORA1.1-201ENST00000364671 133 ntBASIC2.14□□□□□ -2.07
YBX1P67809 AL451046.2-201ENST00000403074 277 ntBASIC2.14□□□□□ -2.07
YBX1P67809 AL023284.1-201ENST00000403956 276 ntBASIC2.14□□□□□ -2.07
YBX1P67809 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
YBX1P67809 AC108729.3-201ENST00000513484 108 ntBASIC2.14□□□□□ -2.07
YBX1P67809 RNU2-19P-201ENST00000517288 84 ntBASIC2.14□□□□□ -2.07
YBX1P67809 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
YBX1P67809 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
YBX1P67809 MIR424-201ENST00000362227 98 ntBASIC2.13□□□□□ -2.07
YBX1P67809 RNU6-1313P-201ENST00000362622 102 ntBASIC2.13□□□□□ -2.07
YBX1P67809 SNORD115-35-201ENST00000365122 82 ntBASIC2.13□□□□□ -2.07
YBX1P67809 MIR1287-201ENST00000408492 90 ntBASIC2.13□□□□□ -2.07
YBX1P67809 RNU6-887P-201ENST00000410660 100 ntBASIC2.13□□□□□ -2.07
YBX1P67809 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
YBX1P67809 AC245047.7-201ENST00000440265 293 ntBASIC2.13□□□□□ -2.07
YBX1P67809 RPL39P39-201ENST00000455840 151 ntBASIC2.13□□□□□ -2.07
YBX1P67809 snoU13.16-201ENST00000459350 104 ntBASIC2.13□□□□□ -2.07
YBX1P67809 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.12□□□□□ -2.07
YBX1P67809 Y_RNA.73-201ENST00000362910 113 ntBASIC2.12□□□□□ -2.07
YBX1P67809 SNORA67.3-201ENST00000384366 140 ntBASIC2.12□□□□□ -2.07
YBX1P67809 RNU6-342P-201ENST00000384521 104 ntBASIC2.12□□□□□ -2.07
YBX1P67809 RNU6-972P-201ENST00000391208 107 ntBASIC2.12□□□□□ -2.07
YBX1P67809 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.12□□□□□ -2.07
YBX1P67809 RNU7-2P-201ENST00000516096 62 ntBASIC2.12□□□□□ -2.07
YBX1P67809 RNA5SP82-201ENST00000516707 92 ntBASIC2.12□□□□□ -2.07
YBX1P67809 SNORA74.3-201ENST00000517108 154 ntBASIC2.12□□□□□ -2.07
YBX1P67809 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.12□□□□□ -2.07
YBX1P67809 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.11□□□□□ -2.07
YBX1P67809 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
YBX1P67809 RNU6-497P-201ENST00000365316 104 ntBASIC2.11□□□□□ -2.07
YBX1P67809 RNU6-242P-201ENST00000384359 107 ntBASIC2.11□□□□□ -2.07
YBX1P67809 SNORD116-22-201ENST00000384430 92 ntBASIC2.11□□□□□ -2.07
YBX1P67809 RNU6-402P-201ENST00000410678 103 ntBASIC2.11□□□□□ -2.07
YBX1P67809 HMGN2P23-201ENST00000456759 269 ntBASIC2.11□□□□□ -2.07
YBX1P67809 MIR8055-201ENST00000610739 97 ntBASIC2.11□□□□□ -2.07
YBX1P67809 MIR376B-201ENST00000614515 100 ntBASIC2.11□□□□□ -2.07
YBX1P67809 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.11□□□□□ -2.07
YBX1P67809 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
YBX1P67809 RNU6-1124P-201ENST00000384169 107 ntBASIC2.1□□□□□ -2.07
YBX1P67809 SNORA64-201ENST00000384674 134 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms