Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MIR4319-201ENST00000577285 85 ntBASIC2.97□□□□□ -1.93
USP46P62068 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.97□□□□□ -1.93
USP46P62068 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.97□□□□□ -1.93
USP46P62068 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.97□□□□□ -1.93
USP46P62068 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.97□□□□□ -1.93
USP46P62068 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USP46P62068 RNU6-203P-201ENST00000384038 104 ntBASIC2.96□□□□□ -1.94
USP46P62068 SNORA2B-201ENST00000384583 137 ntBASIC2.96□□□□□ -1.94
USP46P62068 SNORD88.1-201ENST00000408684 91 ntBASIC2.96□□□□□ -1.94
USP46P62068 RNU6-519P-201ENST00000410590 108 ntBASIC2.96□□□□□ -1.94
USP46P62068 UBE2DNL-203ENST00000474922 222 ntBASIC2.96□□□□□ -1.94
USP46P62068 RNU7-41P-201ENST00000515917 61 ntBASIC2.96□□□□□ -1.94
USP46P62068 RNU6-322P-201ENST00000516010 103 ntBASIC2.96□□□□□ -1.94
USP46P62068 AC141846.1-201ENST00000568348 142 ntBASIC2.96□□□□□ -1.94
USP46P62068 MIR4672-201ENST00000583126 81 ntBASIC2.96□□□□□ -1.94
USP46P62068 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP46P62068 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP46P62068 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
USP46P62068 RNU6-1123P-201ENST00000362347 106 ntBASIC2.95□□□□□ -1.94
USP46P62068 Y_RNA.94-201ENST00000363068 106 ntBASIC2.95□□□□□ -1.94
USP46P62068 Y_RNA.500-201ENST00000384466 111 ntBASIC2.95□□□□□ -1.94
USP46P62068 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.95□□□□□ -1.94
USP46P62068 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.94□□□□□ -1.94
USP46P62068 RPS29P11-201ENST00000496507 171 ntBASIC2.94□□□□□ -1.94
USP46P62068 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.94□□□□□ -1.94
USP46P62068 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.94□□□□□ -1.94
USP46P62068 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USP46P62068 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP46P62068 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
USP46P62068 AC062016.1-201ENST00000355719 319 ntBASIC2.93□□□□□ -1.94
USP46P62068 MIR512-1-201ENST00000384913 84 ntBASIC2.93□□□□□ -1.94
USP46P62068 RNU6-360P-201ENST00000390944 104 ntBASIC2.93□□□□□ -1.94
USP46P62068 AL138827.1-201ENST00000402666 306 ntBASIC2.93□□□□□ -1.94
USP46P62068 RNA5SP445-201ENST00000515889 115 ntBASIC2.93□□□□□ -1.94
USP46P62068 MIR4513-201ENST00000581077 86 ntBASIC2.93□□□□□ -1.94
USP46P62068 MIR4298-201ENST00000584380 73 ntBASIC2.93□□□□□ -1.94
USP46P62068 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
USP46P62068 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
USP46P62068 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
USP46P62068 AC009474.2-201ENST00000451383 136 ntBASIC2.92□□□□□ -1.94
USP46P62068 RPL23AP94-201ENST00000512518 302 ntBASIC2.92□□□□□ -1.94
USP46P62068 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.92□□□□□ -1.94
USP46P62068 MIR4712-201ENST00000583750 82 ntBASIC2.92□□□□□ -1.94
USP46P62068 AC009487.2-201ENST00000420969 6821 ntBASIC2.92□□□□□ -1.94
USP46P62068 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
USP46P62068 RNA5SP450-201ENST00000411206 102 ntBASIC2.91□□□□□ -1.94
USP46P62068 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.91□□□□□ -1.94
USP46P62068 RPS29P6-201ENST00000438196 145 ntBASIC2.91□□□□□ -1.94
USP46P62068 SNORD109B-201ENST00000458961 67 ntBASIC2.91□□□□□ -1.94
USP46P62068 SNORD109A-201ENST00000459128 67 ntBASIC2.91□□□□□ -1.94
USP46P62068 SNORA31.15-201ENST00000516771 132 ntBASIC2.91□□□□□ -1.94
USP46P62068 AC090897.1-201ENST00000580909 226 ntBASIC2.91□□□□□ -1.94
USP46P62068 AL662814.1-201ENST00000617364 121 ntBASIC2.91□□□□□ -1.94
USP46P62068 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
USP46P62068 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
USP46P62068 AC003982.1-202ENST00000469928 248 ntBASIC2.9□□□□□ -1.95
USP46P62068 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.9□□□□□ -1.95
USP46P62068 RNA5SP184-201ENST00000411071 108 ntBASIC2.89□□□□□ -1.95
USP46P62068 AC004965.1-201ENST00000413033 213 ntBASIC2.89□□□□□ -1.95
USP46P62068 SNORD111.1-201ENST00000516421 86 ntBASIC2.89□□□□□ -1.95
USP46P62068 MIR3162-201ENST00000581818 82 ntBASIC2.89□□□□□ -1.95
USP46P62068 AP000753.3-201ENST00000604083 169 ntBASIC2.89□□□□□ -1.95
USP46P62068 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
USP46P62068 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP46P62068 RNU4-32P-201ENST00000363404 141 ntBASIC2.88□□□□□ -1.95
USP46P62068 RNA5SP259-201ENST00000365541 109 ntBASIC2.88□□□□□ -1.95
USP46P62068 RNA5SP21-201ENST00000410917 96 ntBASIC2.88□□□□□ -1.95
USP46P62068 RPS27P21-201ENST00000486977 252 ntBASIC2.88□□□□□ -1.95
USP46P62068 MIR4500-201ENST00000579472 76 ntBASIC2.88□□□□□ -1.95
USP46P62068 MIR8066-201ENST00000617280 78 ntBASIC2.88□□□□□ -1.95
USP46P62068 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.88□□□□□ -1.95
USP46P62068 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
USP46P62068 HSBP1P2-201ENST00000299671 229 ntBASIC2.87□□□□□ -1.95
USP46P62068 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.87□□□□□ -1.95
USP46P62068 RNA5SP492-201ENST00000411330 114 ntBASIC2.87□□□□□ -1.95
USP46P62068 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.87□□□□□ -1.95
USP46P62068 RNU7-153P-201ENST00000516455 62 ntBASIC2.87□□□□□ -1.95
USP46P62068 AC140658.3-201ENST00000567603 271 ntBASIC2.87□□□□□ -1.95
USP46P62068 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.87□□□□□ -1.95
USP46P62068 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP46P62068 MAPK10-266ENST00000641066 6555 ntBASIC2.86□□□□□ -1.95
USP46P62068 RNY1P2-201ENST00000364820 117 ntBASIC2.86□□□□□ -1.95
USP46P62068 RNU6-949P-201ENST00000384040 107 ntBASIC2.86□□□□□ -1.95
USP46P62068 MIR9-1-201ENST00000385198 89 ntBASIC2.86□□□□□ -1.95
USP46P62068 MIR653-201ENST00000385279 96 ntBASIC2.86□□□□□ -1.95
USP46P62068 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
USP46P62068 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.86□□□□□ -1.95
USP46P62068 AC087499.7-201ENST00000441958 109 ntBASIC2.86□□□□□ -1.95
USP46P62068 MIR4529-201ENST00000578110 78 ntBASIC2.86□□□□□ -1.95
USP46P62068 Y_RNA.57-201ENST00000362806 113 ntBASIC2.85□□□□□ -1.95
USP46P62068 VTRNA1-1-201ENST00000363120 99 ntBASIC2.85□□□□□ -1.95
USP46P62068 RNA5SP48-201ENST00000363969 126 ntBASIC2.85□□□□□ -1.95
USP46P62068 SNORA3A-201ENST00000364113 130 ntBASIC2.85□□□□□ -1.95
USP46P62068 MIR1236-201ENST00000408340 102 ntBASIC2.85□□□□□ -1.95
USP46P62068 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.85□□□□□ -1.95
USP46P62068 MIR449A-201ENST00000362113 91 ntBASIC2.84□□□□□ -1.95
USP46P62068 MIR588-201ENST00000384900 83 ntBASIC2.84□□□□□ -1.95
USP46P62068 AC244023.1-201ENST00000426884 112 ntBASIC2.84□□□□□ -1.95
USP46P62068 SNORA31.25-201ENST00000517242 134 ntBASIC2.84□□□□□ -1.95
USP46P62068 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms