Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNY4P20-201ENST00000516678 93 ntBASIC1.21□□□□□ -2.22
LMO4P61968 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
LMO4P61968 MIR3122-201ENST00000577243 73 ntBASIC1.21□□□□□ -2.22
LMO4P61968 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
LMO4P61968 AC021443.1-201ENST00000604478 211 ntBASIC1.21□□□□□ -2.22
LMO4P61968 SNORD3E-202ENST00000627253 216 ntBASIC1.21□□□□□ -2.22
LMO4P61968 SNORD33-201ENST00000362761 85 ntBASIC1.2□□□□□ -2.22
LMO4P61968 RNU6-755P-201ENST00000364400 103 ntBASIC1.2□□□□□ -2.22
LMO4P61968 SNORA22-201ENST00000383907 134 ntBASIC1.2□□□□□ -2.22
LMO4P61968 RNU6-203P-201ENST00000384038 104 ntBASIC1.2□□□□□ -2.22
LMO4P61968 MIR570-201ENST00000384917 97 ntBASIC1.2□□□□□ -2.22
LMO4P61968 MIR136-201ENST00000385207 82 ntBASIC1.2□□□□□ -2.22
LMO4P61968 RNU1-78P-201ENST00000391248 165 ntBASIC1.2□□□□□ -2.22
LMO4P61968 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.2□□□□□ -2.22
LMO4P61968 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
LMO4P61968 RPS29P24-201ENST00000486345 171 ntBASIC1.2□□□□□ -2.22
LMO4P61968 COX6CP6-201ENST00000490840 228 ntBASIC1.2□□□□□ -2.22
LMO4P61968 AC079140.2-201ENST00000506193 142 ntBASIC1.2□□□□□ -2.22
LMO4P61968 RNA5SP445-201ENST00000515889 115 ntBASIC1.2□□□□□ -2.22
LMO4P61968 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
LMO4P61968 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LMO4P61968 Y_RNA.298-201ENST00000364960 107 ntBASIC1.19□□□□□ -2.22
LMO4P61968 Y_RNA.327-201ENST00000365201 102 ntBASIC1.19□□□□□ -2.22
LMO4P61968 Y_RNA.454-201ENST00000384224 113 ntBASIC1.19□□□□□ -2.22
LMO4P61968 SNORD28B-201ENST00000390993 75 ntBASIC1.19□□□□□ -2.22
LMO4P61968 RNA5SP247-201ENST00000411181 105 ntBASIC1.19□□□□□ -2.22
LMO4P61968 AC245517.4-201ENST00000448601 281 ntBASIC1.19□□□□□ -2.22
LMO4P61968 RNU7-96P-201ENST00000459535 64 ntBASIC1.19□□□□□ -2.22
LMO4P61968 AC023790.1-201ENST00000482174 347 ntBASIC1.19□□□□□ -2.22
LMO4P61968 RNU7-123P-201ENST00000515911 60 ntBASIC1.19□□□□□ -2.22
LMO4P61968 SUMO2P16-201ENST00000519475 264 ntBASIC1.19□□□□□ -2.22
LMO4P61968 MIR3937-201ENST00000580135 106 ntBASIC1.19□□□□□ -2.22
LMO4P61968 AP000648.3-201ENST00000623539 4507 ntBASIC1.18□□□□□ -2.22
LMO4P61968 MT-TI-201ENST00000387365 69 ntBASIC1.18□□□□□ -2.22
LMO4P61968 AL035398.1-201ENST00000430869 322 ntBASIC1.18□□□□□ -2.22
LMO4P61968 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.18□□□□□ -2.22
LMO4P61968 RNU2-11P-201ENST00000459191 187 ntBASIC1.18□□□□□ -2.22
LMO4P61968 RNU7-164P-201ENST00000459221 62 ntBASIC1.18□□□□□ -2.22
LMO4P61968 SNORD123-201ENST00000459473 70 ntBASIC1.18□□□□□ -2.22
LMO4P61968 RNU2-35P-201ENST00000516446 142 ntBASIC1.18□□□□□ -2.22
LMO4P61968 AC019176.1-201ENST00000518519 225 ntBASIC1.18□□□□□ -2.22
LMO4P61968 AC022523.2-201ENST00000561045 150 ntBASIC1.18□□□□□ -2.22
LMO4P61968 AC007012.1-201ENST00000567192 175 ntBASIC1.18□□□□□ -2.22
LMO4P61968 MIR4305-201ENST00000583252 102 ntBASIC1.18□□□□□ -2.22
LMO4P61968 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.18□□□□□ -2.22
LMO4P61968 AL035470.1-201ENST00000622571 220 ntBASIC1.18□□□□□ -2.22
LMO4P61968 WWP1P1-201ENST00000466609 2769 ntBASIC1.18□□□□□ -2.22
LMO4P61968 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
LMO4P61968 Y_RNA.198-201ENST00000364013 98 ntBASIC1.17□□□□□ -2.22
LMO4P61968 RNU6-392P-201ENST00000364926 101 ntBASIC1.17□□□□□ -2.22
LMO4P61968 SNORD1A-201ENST00000364968 72 ntBASIC1.17□□□□□ -2.22
LMO4P61968 SNORA1.2-201ENST00000365189 134 ntBASIC1.17□□□□□ -2.22
LMO4P61968 Y_RNA.370-201ENST00000365589 108 ntBASIC1.17□□□□□ -2.22
LMO4P61968 RNU6-1065P-201ENST00000384513 106 ntBASIC1.17□□□□□ -2.22
LMO4P61968 Y_RNA.549-201ENST00000384657 102 ntBASIC1.17□□□□□ -2.22
LMO4P61968 RNU6-1104P-201ENST00000384723 104 ntBASIC1.17□□□□□ -2.22
LMO4P61968 MIR513A1-201ENST00000385138 129 ntBASIC1.17□□□□□ -2.22
LMO4P61968 AL161935.2-201ENST00000414627 60 ntBASIC1.17□□□□□ -2.22
LMO4P61968 RNU7-45P-201ENST00000459460 63 ntBASIC1.17□□□□□ -2.22
LMO4P61968 RNU2-13P-201ENST00000515909 113 ntBASIC1.17□□□□□ -2.22
LMO4P61968 RNU6-917P-201ENST00000516294 104 ntBASIC1.17□□□□□ -2.22
LMO4P61968 MIR548AR-201ENST00000582191 57 ntBASIC1.17□□□□□ -2.22
LMO4P61968 FAM106DP-201ENST00000586416 501 ntBASIC1.17□□□□□ -2.22
LMO4P61968 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LMO4P61968 AC021613.1-201ENST00000623880 111 ntBASIC1.17□□□□□ -2.22
LMO4P61968 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.16□□□□□ -2.22
LMO4P61968 MIR302B-201ENST00000362188 73 ntBASIC1.16□□□□□ -2.22
LMO4P61968 MIR302D-201ENST00000362275 68 ntBASIC1.16□□□□□ -2.22
LMO4P61968 RNU6-1123P-201ENST00000362347 106 ntBASIC1.16□□□□□ -2.22
LMO4P61968 Y_RNA.281-201ENST00000364774 94 ntBASIC1.16□□□□□ -2.22
LMO4P61968 RNA5SP363-201ENST00000365072 115 ntBASIC1.16□□□□□ -2.22
LMO4P61968 RNU6-147P-201ENST00000383983 107 ntBASIC1.16□□□□□ -2.22
LMO4P61968 SNORA24-201ENST00000384096 131 ntBASIC1.16□□□□□ -2.22
LMO4P61968 MIR194-1-201ENST00000384892 85 ntBASIC1.16□□□□□ -2.22
LMO4P61968 MIR320A-201ENST00000385302 82 ntBASIC1.16□□□□□ -2.22
LMO4P61968 RNU6-1190P-201ENST00000410811 104 ntBASIC1.16□□□□□ -2.22
LMO4P61968 RNA5SP144-201ENST00000410846 116 ntBASIC1.16□□□□□ -2.22
LMO4P61968 RNU1-98P-201ENST00000458992 160 ntBASIC1.16□□□□□ -2.22
LMO4P61968 AC107297.1-201ENST00000459991 176 ntBASIC1.16□□□□□ -2.22
LMO4P61968 RNU6-902P-201ENST00000517212 91 ntBASIC1.16□□□□□ -2.22
LMO4P61968 AC015688.6-201ENST00000577737 104 ntBASIC1.16□□□□□ -2.22
LMO4P61968 uc_338.28-201ENST00000612082 187 ntBASIC1.16□□□□□ -2.22
LMO4P61968 AL157834.3-201ENST00000615543 103 ntBASIC1.16□□□□□ -2.22
LMO4P61968 MIR8070-201ENST00000616510 88 ntBASIC1.16□□□□□ -2.22
LMO4P61968 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.16□□□□□ -2.22
LMO4P61968 AC106754.2-201ENST00000623006 233 ntBASIC1.16□□□□□ -2.22
LMO4P61968 Y_RNA.213-201ENST00000364178 111 ntBASIC1.15□□□□□ -2.23
LMO4P61968 Y_RNA.226-201ENST00000364337 114 ntBASIC1.15□□□□□ -2.23
LMO4P61968 RNA5SP259-201ENST00000365541 109 ntBASIC1.15□□□□□ -2.23
LMO4P61968 SNORA70.7-201ENST00000384159 133 ntBASIC1.15□□□□□ -2.23
LMO4P61968 SNORD12C-201ENST00000386307 89 ntBASIC1.15□□□□□ -2.23
LMO4P61968 POLR2J4-204ENST00000418424 324 ntBASIC1.15□□□□□ -2.23
LMO4P61968 AC027119.1-201ENST00000440877 241 ntBASIC1.15□□□□□ -2.23
LMO4P61968 RPS29P29-201ENST00000456396 171 ntBASIC1.15□□□□□ -2.23
LMO4P61968 RNU6-958P-201ENST00000516995 106 ntBASIC1.15□□□□□ -2.23
LMO4P61968 MIR3613-201ENST00000579844 87 ntBASIC1.15□□□□□ -2.23
LMO4P61968 AC243994.1-201ENST00000618627 109 ntBASIC1.15□□□□□ -2.23
LMO4P61968 AL353770.2-201ENST00000620024 78 ntBASIC1.15□□□□□ -2.23
LMO4P61968 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.15□□□□□ -2.23
LMO4P61968 Y_RNA.85-201ENST00000363014 111 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 289 ms