Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RPL39P39-201ENST00000455840 151 ntBASIC0.85□□□□□ -2.27
RIPK4P57078 RNA5SP436-201ENST00000516020 115 ntBASIC0.85□□□□□ -2.27
RIPK4P57078 SNORD111.1-201ENST00000516421 86 ntBASIC0.85□□□□□ -2.27
RIPK4P57078 SCARNA15-202ENST00000516881 127 ntBASIC0.85□□□□□ -2.27
RIPK4P57078 MIR548AO-201ENST00000579992 96 ntBASIC0.85□□□□□ -2.27
RIPK4P57078 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
RIPK4P57078 AC008133.2-201ENST00000624540 351 ntBASIC0.85□□□□□ -2.27
RIPK4P57078 RNU6-597P-201ENST00000365620 102 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 Y_RNA.398-201ENST00000383952 99 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 SNORA80D-201ENST00000384488 135 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 Y_RNA.521-201ENST00000384560 114 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 RNU6-913P-201ENST00000390913 95 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 SNORA40.5-201ENST00000391061 128 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 SNORA26-201ENST00000391286 122 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 SNORA79-201ENST00000408376 140 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.84□□□□□ -2.27
RIPK4P57078 RNU7-43P-201ENST00000516554 64 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 RNU6-126P-201ENST00000516685 103 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 RNU6-255P-201ENST00000516957 105 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 RNU6-958P-201ENST00000516995 106 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 RNU2-60P-201ENST00000517290 128 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.84□□□□□ -2.27
RIPK4P57078 MIR3144-201ENST00000579460 79 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 AC098479.1-201ENST00000609225 154 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 AC243994.1-201ENST00000618627 109 ntBASIC0.84□□□□□ -2.27
RIPK4P57078 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
RIPK4P57078 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-34-201ENST00000362441 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-12-201ENST00000362583 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-29-201ENST00000362834 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-9-201ENST00000362912 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-21-201ENST00000362963 81 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-14-201ENST00000363090 81 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-13-201ENST00000363358 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-41-201ENST00000363608 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-11-201ENST00000363616 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-5-201ENST00000363633 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-39-201ENST00000363694 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-4-201ENST00000363810 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 Y_RNA.180-201ENST00000363867 113 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-16-201ENST00000363887 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-6-201ENST00000363942 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-42-201ENST00000364273 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 Y_RNA.242-201ENST00000364473 110 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 Y_RNA.270-201ENST00000364693 104 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-15-201ENST00000364809 81 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-1-201ENST00000364961 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-26-201ENST00000365067 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-10-201ENST00000365073 81 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-43-201ENST00000365503 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-36-201ENST00000365629 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 RNU6-1292P-201ENST00000383856 107 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 Y_RNA.393-201ENST00000383936 102 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 RNU6-1189P-201ENST00000383958 107 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORA24-201ENST00000384096 131 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORA27-201ENST00000384323 126 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 Y_RNA.555-201ENST00000384673 110 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 RNU6-1190P-201ENST00000410811 104 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 AL392103.1-201ENST00000447000 198 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 AC087499.4-201ENST00000448505 178 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 RNU7-45P-201ENST00000459460 63 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 AC107027.2-201ENST00000512197 115 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 SNORD115-40-201ENST00000606510 82 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 AC008163.1-202ENST00000636004 2889 ntBASIC0.83□□□□□ -2.28
RIPK4P57078 MIR342-201ENST00000362212 99 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 Y_RNA.251-201ENST00000364551 99 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 Y_RNA.337-201ENST00000365312 102 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 Y_RNA.357-201ENST00000365487 109 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 Y_RNA.410-201ENST00000383992 113 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 Y_RNA.497-201ENST00000384447 98 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 Y_RNA.537-201ENST00000384626 109 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 Y_RNA.542-201ENST00000384641 111 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 MIR200A-201ENST00000384875 90 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 MIR624-201ENST00000385217 97 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 Y_RNA.580-201ENST00000391004 95 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 HMGN1P33-201ENST00000432945 451 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 RNU7-21P-201ENST00000459430 62 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 RNA5SP272-201ENST00000516095 111 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 MIR5197-201ENST00000583721 112 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 MIR8055-201ENST00000610739 97 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 MIR4251-201ENST00000635819 61 ntBASIC0.82□□□□□ -2.28
RIPK4P57078 RNA5SP264-201ENST00000363115 107 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 Y_RNA.170-201ENST00000363746 110 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 Y_RNA.351-201ENST00000365436 96 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 SNORA51.10-201ENST00000384418 136 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 SNORA75.2-201ENST00000391138 150 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 SNORA75.3-201ENST00000391231 150 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 RNU6-733P-201ENST00000410759 104 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 RNU7-197P-201ENST00000458836 62 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 RNU2-11P-201ENST00000459191 187 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 RNU6-1149P-201ENST00000516810 97 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 DNAJC19P2-201ENST00000593340 302 ntBASIC0.81□□□□□ -2.28
RIPK4P57078 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 321.9 ms