Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 SNORD58A-201ENST00000383875 65 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 MIR759-201ENST00000390224 91 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 Y_RNA.609-201ENST00000410669 89 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 SNORA7.5-201ENST00000410672 110 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 AL445646.1-201ENST00000431784 216 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 AC099677.2-201ENST00000436385 175 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 MIR1270-201ENST00000459320 83 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 AC024995.1-201ENST00000523014 93 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 AC011604.1-201ENST00000545978 196 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 MIR5197-201ENST00000583721 112 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 SNRPGP19-201ENST00000603826 189 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 U6.108-201ENST00000637764 58 ntBASIC2.16□□□□□ -2.06
ATXN1P54253 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ATXN1P54253 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ATXN1P54253 RNU6-363P-201ENST00000362895 105 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 RNY1P6-201ENST00000384193 109 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 Y_RNA.545-201ENST00000384652 105 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
ATXN1P54253 SNORA48.1-201ENST00000390879 135 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 RNU6-733P-201ENST00000410759 104 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 Y_RNA.621-201ENST00000411065 96 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 AL512326.2-201ENST00000426359 151 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.15□□□□□ -2.07
ATXN1P54253 SCARNA18B-201ENST00000458806 135 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 AL163195.1-201ENST00000496941 348 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 AC020891.4-201ENST00000605745 93 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 AC022513.1-201ENST00000624512 117 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 MIR6079-201ENST00000635807 62 ntBASIC2.15□□□□□ -2.07
ATXN1P54253 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ATXN1P54253 RNU6-457P-201ENST00000363999 107 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 RNU4-67P-201ENST00000364569 141 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 Y_RNA.540-201ENST00000384638 111 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 U8.15-201ENST00000390947 134 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 RNU6-917P-201ENST00000516294 104 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 RNU6-1291P-201ENST00000516591 104 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 RNU6-539P-201ENST00000516665 103 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 Y_RNA.705-201ENST00000516862 110 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 MIR4305-201ENST00000583252 102 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 U7.4-201ENST00000614961 63 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 SEPT14P17-201ENST00000617978 177 ntBASIC2.14□□□□□ -2.07
ATXN1P54253 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATXN1P54253 Y_RNA.57-201ENST00000362806 113 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 Y_RNA.267-201ENST00000364679 109 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 SNORA2.2-201ENST00000365473 135 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 SNORA40.18-201ENST00000391200 128 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 SNORA26-201ENST00000391286 122 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 AC019129.1-201ENST00000403786 261 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 AC233266.1-201ENST00000454518 96 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 RNU7-94P-201ENST00000459576 63 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 AC125388.1-201ENST00000459631 156 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 SNORD36C-201ENST00000516733 66 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 AC069114.2-201ENST00000604699 304 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 AC103810.7-201ENST00000607821 91 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 AC242852.1-201ENST00000612151 96 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 AC244015.1-201ENST00000622301 99 ntBASIC2.13□□□□□ -2.07
ATXN1P54253 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATXN1P54253 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
ATXN1P54253 RNU6-1201P-201ENST00000384227 107 ntBASIC2.12□□□□□ -2.07
ATXN1P54253 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.12□□□□□ -2.07
ATXN1P54253 RNVU1-2-201ENST00000516326 135 ntBASIC2.12□□□□□ -2.07
ATXN1P54253 RNU7-153P-201ENST00000516455 62 ntBASIC2.12□□□□□ -2.07
ATXN1P54253 RNU6-126P-201ENST00000516685 103 ntBASIC2.12□□□□□ -2.07
ATXN1P54253 RNU6-341P-201ENST00000516973 96 ntBASIC2.12□□□□□ -2.07
ATXN1P54253 MIR2681-201ENST00000581814 105 ntBASIC2.12□□□□□ -2.07
ATXN1P54253 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
ATXN1P54253 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ATXN1P54253 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATXN1P54253 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATXN1P54253 SNORD115-39-201ENST00000363694 82 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 SNORD24-201ENST00000383884 75 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 SNORA18-201ENST00000384416 132 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 Y_RNA.507-201ENST00000384500 99 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 RNU6-613P-201ENST00000410412 108 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 AP1B1P2-201ENST00000416196 106 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 AL450471.1-201ENST00000447509 127 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 RNA5SP182-201ENST00000516064 82 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 MIR5094-201ENST00000578766 85 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 RNU6-86P-201ENST00000606534 107 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 MIR376B-201ENST00000614515 100 ntBASIC2.11□□□□□ -2.07
ATXN1P54253 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATXN1P54253 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ATXN1P54253 SNORD115-19-201ENST00000363098 82 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 SNORD115-18-201ENST00000363293 82 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 SNORD115-17-201ENST00000364612 82 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 AC069257.2-201ENST00000441819 155 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 RNA5SP480-201ENST00000516840 109 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 RNU6-1258P-201ENST00000516911 111 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 AC140658.3-201ENST00000567603 271 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 MIR4662B-201ENST00000579498 81 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 MIR4713-201ENST00000582691 75 ntBASIC2.1□□□□□ -2.07
ATXN1P54253 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 276.7 ms