Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RNU6-998P-201ENST00000515894 101 ntBASIC2.05□□□□□ -2.08
MRE11P49959 Y_RNA.198-201ENST00000364013 98 ntBASIC2.04□□□□□ -2.08
MRE11P49959 MIR136-201ENST00000385207 82 ntBASIC2.04□□□□□ -2.08
MRE11P49959 RNU1-123P-201ENST00000458950 160 ntBASIC2.04□□□□□ -2.08
MRE11P49959 RNU7-96P-201ENST00000459535 64 ntBASIC2.04□□□□□ -2.08
MRE11P49959 RPS29P24-201ENST00000486345 171 ntBASIC2.04□□□□□ -2.08
MRE11P49959 SNORA31.4-201ENST00000516049 129 ntBASIC2.04□□□□□ -2.08
MRE11P49959 SNORA31.17-201ENST00000516953 127 ntBASIC2.04□□□□□ -2.08
MRE11P49959 AC007012.1-201ENST00000567192 175 ntBASIC2.04□□□□□ -2.08
MRE11P49959 MIR4778-201ENST00000577635 80 ntBASIC2.04□□□□□ -2.08
MRE11P49959 HSPE1P19-201ENST00000603327 295 ntBASIC2.04□□□□□ -2.08
MRE11P49959 MIR424-201ENST00000362227 98 ntBASIC2.03□□□□□ -2.08
MRE11P49959 Y_RNA.298-201ENST00000364960 107 ntBASIC2.03□□□□□ -2.08
MRE11P49959 MIR526A1-201ENST00000384897 85 ntBASIC2.03□□□□□ -2.08
MRE11P49959 SUMO2P16-201ENST00000519475 264 ntBASIC2.03□□□□□ -2.08
MRE11P49959 SNORD3E-202ENST00000627253 216 ntBASIC2.03□□□□□ -2.08
MRE11P49959 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MRE11P49959 Y_RNA.68-201ENST00000362881 102 ntBASIC2.02□□□□□ -2.09
MRE11P49959 RNU4-16P-201ENST00000364737 141 ntBASIC2.02□□□□□ -2.09
MRE11P49959 Y_RNA.281-201ENST00000364774 94 ntBASIC2.02□□□□□ -2.09
MRE11P49959 SNORA1.2-201ENST00000365189 134 ntBASIC2.02□□□□□ -2.09
MRE11P49959 RNU6-147P-201ENST00000383983 107 ntBASIC2.02□□□□□ -2.09
MRE11P49959 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.02□□□□□ -2.09
MRE11P49959 RNU7-164P-201ENST00000459221 62 ntBASIC2.02□□□□□ -2.09
MRE11P49959 RNU7-123P-201ENST00000515911 60 ntBASIC2.02□□□□□ -2.09
MRE11P49959 MIR4305-201ENST00000583252 102 ntBASIC2.02□□□□□ -2.09
MRE11P49959 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.02□□□□□ -2.09
MRE11P49959 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.01□□□□□ -2.09
MRE11P49959 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.01□□□□□ -2.09
MRE11P49959 Y_RNA.549-201ENST00000384657 102 ntBASIC2.01□□□□□ -2.09
MRE11P49959 AL035398.1-201ENST00000430869 322 ntBASIC2.01□□□□□ -2.09
MRE11P49959 RNU6-412P-201ENST00000516434 106 ntBASIC2.01□□□□□ -2.09
MRE11P49959 RNU2-35P-201ENST00000516446 142 ntBASIC2.01□□□□□ -2.09
MRE11P49959 MIR3198-2-201ENST00000577868 80 ntBASIC2.01□□□□□ -2.09
MRE11P49959 MIR3613-201ENST00000579844 87 ntBASIC2.01□□□□□ -2.09
MRE11P49959 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MRE11P49959 MIR302B-201ENST00000362188 73 ntBASIC2□□□□□ -2.09
MRE11P49959 Y_RNA.213-201ENST00000364178 111 ntBASIC2□□□□□ -2.09
MRE11P49959 Y_RNA.370-201ENST00000365589 108 ntBASIC2□□□□□ -2.09
MRE11P49959 MT-TI-201ENST00000387365 69 ntBASIC2□□□□□ -2.09
MRE11P49959 RNU6-360P-201ENST00000390944 104 ntBASIC2□□□□□ -2.09
MRE11P49959 RNU2-11P-201ENST00000459191 187 ntBASIC2□□□□□ -2.09
MRE11P49959 RNA5SP57-201ENST00000459463 123 ntBASIC2□□□□□ -2.09
MRE11P49959 AC107297.1-201ENST00000459991 176 ntBASIC2□□□□□ -2.09
MRE11P49959 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2□□□□□ -2.09
MRE11P49959 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2□□□□□ -2.09
MRE11P49959 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2□□□□□ -2.09
MRE11P49959 Y_RNA.85-201ENST00000363014 111 ntBASIC1.99□□□□□ -2.09
MRE11P49959 RNU6-1104P-201ENST00000384723 104 ntBASIC1.99□□□□□ -2.09
MRE11P49959 SNORD12C-201ENST00000386307 89 ntBASIC1.99□□□□□ -2.09
MRE11P49959 AC003989.2-201ENST00000440224 169 ntBASIC1.99□□□□□ -2.09
MRE11P49959 SNORD123-201ENST00000459473 70 ntBASIC1.99□□□□□ -2.09
MRE11P49959 RNU2-13P-201ENST00000515909 113 ntBASIC1.99□□□□□ -2.09
MRE11P49959 MIR4679-2-201ENST00000578358 77 ntBASIC1.99□□□□□ -2.09
MRE11P49959 uc_338.28-201ENST00000612082 187 ntBASIC1.99□□□□□ -2.09
MRE11P49959 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MRE11P49959 RNU6-1107P-201ENST00000364817 104 ntBASIC1.98□□□□□ -2.09
MRE11P49959 SNORD28B-201ENST00000390993 75 ntBASIC1.98□□□□□ -2.09
MRE11P49959 AC009474.2-201ENST00000451383 136 ntBASIC1.98□□□□□ -2.09
MRE11P49959 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.98□□□□□ -2.09
MRE11P49959 AC022523.2-201ENST00000561045 150 ntBASIC1.98□□□□□ -2.09
MRE11P49959 AC022254.1-201ENST00000567857 235 ntBASIC1.98□□□□□ -2.09
MRE11P49959 MIR548AR-201ENST00000582191 57 ntBASIC1.98□□□□□ -2.09
MRE11P49959 MIR8081-201ENST00000611533 95 ntBASIC1.98□□□□□ -2.09
MRE11P49959 AL035470.1-201ENST00000622571 220 ntBASIC1.98□□□□□ -2.09
MRE11P49959 AC021613.1-201ENST00000623880 111 ntBASIC1.98□□□□□ -2.09
MRE11P49959 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
MRE11P49959 RNY4P6-201ENST00000363667 96 ntBASIC1.97□□□□□ -2.09
MRE11P49959 RNU6-414P-201ENST00000363705 104 ntBASIC1.97□□□□□ -2.09
MRE11P49959 RNU6-203P-201ENST00000384038 104 ntBASIC1.97□□□□□ -2.09
MRE11P49959 Y_RNA.433-201ENST00000384089 102 ntBASIC1.97□□□□□ -2.09
MRE11P49959 SNORA24-201ENST00000384096 131 ntBASIC1.97□□□□□ -2.09
MRE11P49959 SNORA70.7-201ENST00000384159 133 ntBASIC1.97□□□□□ -2.09
MRE11P49959 MIR759-201ENST00000390224 91 ntBASIC1.97□□□□□ -2.09
MRE11P49959 RNA5SP144-201ENST00000410846 116 ntBASIC1.97□□□□□ -2.09
MRE11P49959 AC008834.1-201ENST00000511612 175 ntBASIC1.97□□□□□ -2.09
MRE11P49959 FAM106DP-201ENST00000586416 501 ntBASIC1.97□□□□□ -2.09
MRE11P49959 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.97□□□□□ -2.09
MRE11P49959 AC084768.2-201ENST00000622736 221 ntBASIC1.97□□□□□ -2.09
MRE11P49959 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
MRE11P49959 RNU6-1123P-201ENST00000362347 106 ntBASIC1.96□□□□□ -2.1
MRE11P49959 Y_RNA.362-201ENST00000365518 110 ntBASIC1.96□□□□□ -2.1
MRE11P49959 RNU6-106P-201ENST00000384405 107 ntBASIC1.96□□□□□ -2.1
MRE11P49959 RNU6-997P-201ENST00000384725 107 ntBASIC1.96□□□□□ -2.1
MRE11P49959 MIR934-201ENST00000401241 83 ntBASIC1.96□□□□□ -2.1
MRE11P49959 RPS29P29-201ENST00000456396 171 ntBASIC1.96□□□□□ -2.1
MRE11P49959 RNU7-45P-201ENST00000459460 63 ntBASIC1.96□□□□□ -2.1
MRE11P49959 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
MRE11P49959 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.96□□□□□ -2.1
MRE11P49959 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MRE11P49959 MIR194-1-201ENST00000384892 85 ntBASIC1.95□□□□□ -2.1
MRE11P49959 AL031737.1-201ENST00000450125 223 ntBASIC1.95□□□□□ -2.1
MRE11P49959 RNU7-67P-201ENST00000459003 62 ntBASIC1.95□□□□□ -2.1
MRE11P49959 RNU7-53P-201ENST00000516705 60 ntBASIC1.95□□□□□ -2.1
MRE11P49959 RNU6-958P-201ENST00000516995 106 ntBASIC1.95□□□□□ -2.1
MRE11P49959 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.95□□□□□ -2.1
MRE11P49959 AC243994.1-201ENST00000618627 109 ntBASIC1.95□□□□□ -2.1
MRE11P49959 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.95□□□□□ -2.1
MRE11P49959 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
MRE11P49959 MIR450A1-201ENST00000362262 91 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 331.7 ms