Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 AL513328.1-201ENST00000446460 224 ntBASIC2.83□□□□□ -1.96
CLK2P49760 RNU7-137P-201ENST00000516788 62 ntBASIC2.83□□□□□ -1.96
CLK2P49760 RNU6-1006P-201ENST00000516998 103 ntBASIC2.83□□□□□ -1.96
CLK2P49760 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLK2P49760 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLK2P49760 Y_RNA.140-201ENST00000363474 103 ntBASIC2.82□□□□□ -1.96
CLK2P49760 SNORD116-10-201ENST00000363791 102 ntBASIC2.82□□□□□ -1.96
CLK2P49760 SNORD116-22-201ENST00000384430 92 ntBASIC2.82□□□□□ -1.96
CLK2P49760 RNU6-1237P-201ENST00000384777 107 ntBASIC2.82□□□□□ -1.96
CLK2P49760 MIR34C-201ENST00000384831 77 ntBASIC2.82□□□□□ -1.96
CLK2P49760 AC009474.2-201ENST00000451383 136 ntBASIC2.82□□□□□ -1.96
CLK2P49760 MIR5194-201ENST00000582634 120 ntBASIC2.82□□□□□ -1.96
CLK2P49760 MIR449A-201ENST00000362113 91 ntBASIC2.81□□□□□ -1.96
CLK2P49760 U8.15-201ENST00000390947 134 ntBASIC2.81□□□□□ -1.96
CLK2P49760 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.81□□□□□ -1.96
CLK2P49760 AL357312.1-201ENST00000603879 298 ntBASIC2.81□□□□□ -1.96
CLK2P49760 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.81□□□□□ -1.96
CLK2P49760 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLK2P49760 RNU4-82P-201ENST00000362443 140 ntBASIC2.8□□□□□ -1.96
CLK2P49760 Y_RNA.190-201ENST00000363964 101 ntBASIC2.8□□□□□ -1.96
CLK2P49760 Y_RNA.219-201ENST00000364232 113 ntBASIC2.8□□□□□ -1.96
CLK2P49760 SNORA6-201ENST00000384033 151 ntBASIC2.8□□□□□ -1.96
CLK2P49760 RNU6-1321P-201ENST00000390905 107 ntBASIC2.8□□□□□ -1.96
CLK2P49760 AC019129.1-201ENST00000403786 261 ntBASIC2.8□□□□□ -1.96
CLK2P49760 SUMO1P4-201ENST00000429430 302 ntBASIC2.8□□□□□ -1.96
CLK2P49760 RNA5SP385-201ENST00000515947 110 ntBASIC2.8□□□□□ -1.96
CLK2P49760 RNU6-922P-201ENST00000516753 99 ntBASIC2.8□□□□□ -1.96
CLK2P49760 AC105081.1-201ENST00000617727 106 ntBASIC2.8□□□□□ -1.96
CLK2P49760 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLK2P49760 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CLK2P49760 U8.9-201ENST00000365667 134 ntBASIC2.79□□□□□ -1.96
CLK2P49760 RNU6-439P-201ENST00000384188 106 ntBASIC2.79□□□□□ -1.96
CLK2P49760 SNORD38.2-201ENST00000384470 69 ntBASIC2.79□□□□□ -1.96
CLK2P49760 RNU7-48P-201ENST00000458875 63 ntBASIC2.79□□□□□ -1.96
CLK2P49760 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.79□□□□□ -1.96
CLK2P49760 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CLK2P49760 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.79□□□□□ -1.96
CLK2P49760 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CLK2P49760 SNORD41-201ENST00000386967 70 ntBASIC2.78□□□□□ -1.96
CLK2P49760 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLK2P49760 AC022137.1-201ENST00000483735 151 ntBASIC2.78□□□□□ -1.96
CLK2P49760 RNU6-86P-201ENST00000606534 107 ntBASIC2.78□□□□□ -1.96
CLK2P49760 AC131280.1-202ENST00000624067 4211 ntBASIC2.78□□□□□ -1.96
CLK2P49760 Y_RNA.98-201ENST00000363109 102 ntBASIC2.77□□□□□ -1.97
CLK2P49760 RNU6-1163P-201ENST00000364516 107 ntBASIC2.77□□□□□ -1.97
CLK2P49760 SNORA67.1-201ENST00000364749 141 ntBASIC2.77□□□□□ -1.97
CLK2P49760 RNY1P13-201ENST00000365030 105 ntBASIC2.77□□□□□ -1.97
CLK2P49760 SNORD58A-201ENST00000383875 65 ntBASIC2.77□□□□□ -1.97
CLK2P49760 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLK2P49760 RPS12P2-201ENST00000439728 269 ntBASIC2.77□□□□□ -1.97
CLK2P49760 AC103810.7-201ENST00000607821 91 ntBASIC2.77□□□□□ -1.97
CLK2P49760 MIR1291-201ENST00000627649 87 ntBASIC2.77□□□□□ -1.97
CLK2P49760 RNA5SP289-201ENST00000362332 137 ntBASIC2.76□□□□□ -1.97
CLK2P49760 RNU6-675P-201ENST00000384236 104 ntBASIC2.76□□□□□ -1.97
CLK2P49760 RNU6-242P-201ENST00000384359 107 ntBASIC2.76□□□□□ -1.97
CLK2P49760 RNU6-1275P-201ENST00000391087 107 ntBASIC2.76□□□□□ -1.97
CLK2P49760 MIR548G-201ENST00000408442 89 ntBASIC2.76□□□□□ -1.97
CLK2P49760 RNU6-402P-201ENST00000410678 103 ntBASIC2.76□□□□□ -1.97
CLK2P49760 RPL23AP94-201ENST00000512518 302 ntBASIC2.76□□□□□ -1.97
CLK2P49760 AC141846.1-201ENST00000568348 142 ntBASIC2.76□□□□□ -1.97
CLK2P49760 RNU6-90P-201ENST00000606352 106 ntBASIC2.76□□□□□ -1.97
CLK2P49760 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CLK2P49760 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.76□□□□□ -1.97
CLK2P49760 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLK2P49760 AC244636.1-201ENST00000421152 228 ntBASIC2.75□□□□□ -1.97
CLK2P49760 AC027119.1-201ENST00000440877 241 ntBASIC2.75□□□□□ -1.97
CLK2P49760 AC133485.1-201ENST00000567176 124 ntBASIC2.75□□□□□ -1.97
CLK2P49760 AC067747.1-201ENST00000608026 250 ntBASIC2.75□□□□□ -1.97
CLK2P49760 AL662814.1-201ENST00000617364 121 ntBASIC2.75□□□□□ -1.97
CLK2P49760 AP001362.1-201ENST00000625165 124 ntBASIC2.75□□□□□ -1.97
CLK2P49760 SNORD78.1-201ENST00000390866 65 ntBASIC2.74□□□□□ -1.97
CLK2P49760 SPINT5P-201ENST00000448174 155 ntBASIC2.74□□□□□ -1.97
CLK2P49760 AC026436.1-201ENST00000510537 270 ntBASIC2.74□□□□□ -1.97
CLK2P49760 Y_RNA.685-201ENST00000516532 108 ntBASIC2.74□□□□□ -1.97
CLK2P49760 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.74□□□□□ -1.97
CLK2P49760 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.74□□□□□ -1.97
CLK2P49760 AL773524.1-201ENST00000614065 229 ntBASIC2.74□□□□□ -1.97
CLK2P49760 SEPT14P17-201ENST00000617978 177 ntBASIC2.74□□□□□ -1.97
CLK2P49760 Y_RNA.73-201ENST00000362910 113 ntBASIC2.73□□□□□ -1.97
CLK2P49760 Y_RNA.567-201ENST00000384736 106 ntBASIC2.73□□□□□ -1.97
CLK2P49760 HSPE1P24-201ENST00000450782 238 ntBASIC2.73□□□□□ -1.97
CLK2P49760 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.73□□□□□ -1.97
CLK2P49760 MIR4287-201ENST00000579398 78 ntBASIC2.73□□□□□ -1.97
CLK2P49760 MIR4513-201ENST00000581077 86 ntBASIC2.73□□□□□ -1.97
CLK2P49760 AC046143.2-201ENST00000609789 160 ntBASIC2.73□□□□□ -1.97
CLK2P49760 GHRLOS.1-201ENST00000610995 70 ntBASIC2.73□□□□□ -1.97
CLK2P49760 WWP1P1-201ENST00000466609 2769 ntBASIC2.73□□□□□ -1.97
CLK2P49760 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.72□□□□□ -1.97
CLK2P49760 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
CLK2P49760 RNU6-1244P-201ENST00000363614 108 ntBASIC2.72□□□□□ -1.97
CLK2P49760 RNA5SP138-201ENST00000365098 114 ntBASIC2.72□□□□□ -1.97
CLK2P49760 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CLK2P49760 RNA5SP445-201ENST00000515889 115 ntBASIC2.72□□□□□ -1.97
CLK2P49760 AC015688.6-201ENST00000577737 104 ntBASIC2.72□□□□□ -1.97
CLK2P49760 MIR4668-201ENST00000582284 70 ntBASIC2.72□□□□□ -1.97
CLK2P49760 MIR3192-201ENST00000584920 77 ntBASIC2.72□□□□□ -1.97
CLK2P49760 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLK2P49760 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLK2P49760 MIR21-201ENST00000362134 72 ntBASIC2.71□□□□□ -1.98
CLK2P49760 RPL39P39-201ENST00000455840 151 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 270.2 ms