Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
MMP13P45452 Y_RNA.163-201ENST00000363702 113 ntBASIC1.6□□□□□ -2.15
MMP13P45452 Y_RNA.323-201ENST00000365157 109 ntBASIC1.6□□□□□ -2.15
MMP13P45452 Y_RNA.328-201ENST00000365208 113 ntBASIC1.6□□□□□ -2.15
MMP13P45452 Y_RNA.470-201ENST00000384307 117 ntBASIC1.6□□□□□ -2.15
MMP13P45452 RNU6-905P-201ENST00000384434 107 ntBASIC1.6□□□□□ -2.15
MMP13P45452 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
MMP13P45452 MIR548D2-201ENST00000384955 97 ntBASIC1.6□□□□□ -2.15
MMP13P45452 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.6□□□□□ -2.15
MMP13P45452 AL031737.1-201ENST00000450125 223 ntBASIC1.6□□□□□ -2.15
MMP13P45452 snoU13.23-201ENST00000458863 104 ntBASIC1.6□□□□□ -2.15
MMP13P45452 RNA5SP170-201ENST00000517150 101 ntBASIC1.6□□□□□ -2.15
MMP13P45452 RNU6-537P-201ENST00000517277 103 ntBASIC1.6□□□□□ -2.15
MMP13P45452 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
MMP13P45452 MIR4791-201ENST00000607666 84 ntBASIC1.6□□□□□ -2.15
MMP13P45452 RNU6-94P-201ENST00000607728 107 ntBASIC1.6□□□□□ -2.15
MMP13P45452 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.6□□□□□ -2.15
MMP13P45452 MIR1255B1-201ENST00000636325 63 ntBASIC1.6□□□□□ -2.15
MMP13P45452 RNU6-640P-201ENST00000363693 105 ntBASIC1.59□□□□□ -2.15
MMP13P45452 Y_RNA.348-201ENST00000365403 103 ntBASIC1.59□□□□□ -2.15
MMP13P45452 Y_RNA.454-201ENST00000384224 113 ntBASIC1.59□□□□□ -2.15
MMP13P45452 RNU6-360P-201ENST00000390944 104 ntBASIC1.59□□□□□ -2.15
MMP13P45452 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
MMP13P45452 AL020996.3-201ENST00000606617 222 ntBASIC1.59□□□□□ -2.15
MMP13P45452 MIR8074-201ENST00000615081 81 ntBASIC1.59□□□□□ -2.15
MMP13P45452 MIR6715A-201ENST00000615929 79 ntBASIC1.59□□□□□ -2.15
MMP13P45452 Y_RNA.213-201ENST00000364178 111 ntBASIC1.58□□□□□ -2.16
MMP13P45452 Y_RNA.531-201ENST00000384589 121 ntBASIC1.58□□□□□ -2.16
MMP13P45452 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
MMP13P45452 RNU6-1319P-201ENST00000390855 104 ntBASIC1.58□□□□□ -2.16
MMP13P45452 RNU6-747P-201ENST00000390928 104 ntBASIC1.58□□□□□ -2.16
MMP13P45452 RNU6-241P-201ENST00000391148 104 ntBASIC1.58□□□□□ -2.16
MMP13P45452 RNU6-177P-201ENST00000411257 104 ntBASIC1.58□□□□□ -2.16
MMP13P45452 AL353813.1-201ENST00000440700 253 ntBASIC1.58□□□□□ -2.16
MMP13P45452 RPS29P29-201ENST00000456396 171 ntBASIC1.58□□□□□ -2.16
MMP13P45452 RPS23P4-201ENST00000487908 423 ntBASIC1.58□□□□□ -2.16
MMP13P45452 AC108210.2-201ENST00000503681 201 ntBASIC1.58□□□□□ -2.16
MMP13P45452 AC068339.1-201ENST00000526965 141 ntBASIC1.58□□□□□ -2.16
MMP13P45452 AC243994.1-201ENST00000618627 109 ntBASIC1.58□□□□□ -2.16
MMP13P45452 MIR4679-1-201ENST00000637619 75 ntBASIC1.58□□□□□ -2.16
MMP13P45452 Y_RNA.43-201ENST00000362670 111 ntBASIC1.57□□□□□ -2.16
MMP13P45452 RNU1-17P-201ENST00000363022 152 ntBASIC1.57□□□□□ -2.16
MMP13P45452 RNU6-1255P-201ENST00000363434 112 ntBASIC1.57□□□□□ -2.16
MMP13P45452 RNY4P6-201ENST00000363667 96 ntBASIC1.57□□□□□ -2.16
MMP13P45452 MIR590-201ENST00000385008 97 ntBASIC1.57□□□□□ -2.16
MMP13P45452 AC004965.1-201ENST00000413033 213 ntBASIC1.57□□□□□ -2.16
MMP13P45452 AC090844.1-201ENST00000422019 156 ntBASIC1.57□□□□□ -2.16
MMP13P45452 RNU7-67P-201ENST00000459003 62 ntBASIC1.57□□□□□ -2.16
MMP13P45452 RNU6-109P-201ENST00000516364 107 ntBASIC1.57□□□□□ -2.16
MMP13P45452 RNU6-184P-201ENST00000516514 107 ntBASIC1.57□□□□□ -2.16
MMP13P45452 RNU7-6P-201ENST00000516845 62 ntBASIC1.57□□□□□ -2.16
MMP13P45452 SNORA74.3-201ENST00000517108 154 ntBASIC1.57□□□□□ -2.16
MMP13P45452 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
MMP13P45452 MIR6717-201ENST00000622747 73 ntBASIC1.57□□□□□ -2.16
MMP13P45452 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
MMP13P45452 MIR302B-201ENST00000362188 73 ntBASIC1.56□□□□□ -2.16
MMP13P45452 RNU6-766P-201ENST00000362478 107 ntBASIC1.56□□□□□ -2.16
MMP13P45452 RNU6-32P-201ENST00000383948 107 ntBASIC1.56□□□□□ -2.16
MMP13P45452 RNU6-756P-201ENST00000383997 107 ntBASIC1.56□□□□□ -2.16
MMP13P45452 RNU6-13P-201ENST00000384248 107 ntBASIC1.56□□□□□ -2.16
MMP13P45452 RNU6-12P-201ENST00000384604 107 ntBASIC1.56□□□□□ -2.16
MMP13P45452 RNU6-41P-201ENST00000384741 107 ntBASIC1.56□□□□□ -2.16
MMP13P45452 RNU7-73P-201ENST00000458743 63 ntBASIC1.56□□□□□ -2.16
MMP13P45452 AC113410.1-201ENST00000505029 247 ntBASIC1.56□□□□□ -2.16
MMP13P45452 RNU7-41P-201ENST00000515917 61 ntBASIC1.56□□□□□ -2.16
MMP13P45452 RNU6-412P-201ENST00000516434 106 ntBASIC1.56□□□□□ -2.16
MMP13P45452 AC015712.3-201ENST00000559380 164 ntBASIC1.56□□□□□ -2.16
MMP13P45452 MIR5009-201ENST00000578736 100 ntBASIC1.56□□□□□ -2.16
MMP13P45452 AC104984.5-201ENST00000586878 94 ntBASIC1.56□□□□□ -2.16
MMP13P45452 MIR8055-201ENST00000610739 97 ntBASIC1.56□□□□□ -2.16
MMP13P45452 AP001318.4-201ENST00000616637 121 ntBASIC1.56□□□□□ -2.16
MMP13P45452 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.56□□□□□ -2.16
MMP13P45452 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MMP13P45452 AL589743.1-201ENST00000551932 2712 ntBASIC1.56□□□□□ -2.16
MMP13P45452 SNORA22.1-201ENST00000362701 134 ntBASIC1.55□□□□□ -2.16
MMP13P45452 SNORA1.2-201ENST00000365189 134 ntBASIC1.55□□□□□ -2.16
MMP13P45452 SNORA51.5-201ENST00000384126 131 ntBASIC1.55□□□□□ -2.16
MMP13P45452 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
MMP13P45452 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
MMP13P45452 MIR1323-201ENST00000408090 73 ntBASIC1.55□□□□□ -2.16
MMP13P45452 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.55□□□□□ -2.16
MMP13P45452 snoU13.25-201ENST00000458945 104 ntBASIC1.55□□□□□ -2.16
MMP13P45452 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
MMP13P45452 SNORA77B-201ENST00000578179 125 ntBASIC1.55□□□□□ -2.16
MMP13P45452 MIR5582-201ENST00000579697 68 ntBASIC1.55□□□□□ -2.16
MMP13P45452 MIR3163-201ENST00000581592 73 ntBASIC1.55□□□□□ -2.16
MMP13P45452 MIR548AE2-201ENST00000583456 67 ntBASIC1.55□□□□□ -2.16
MMP13P45452 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.54□□□□□ -2.16
MMP13P45452 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.54□□□□□ -2.16
MMP13P45452 RNU6-1123P-201ENST00000362347 106 ntBASIC1.54□□□□□ -2.16
MMP13P45452 SNORD115-2-201ENST00000362842 82 ntBASIC1.54□□□□□ -2.16
MMP13P45452 Y_RNA.309-201ENST00000365046 111 ntBASIC1.54□□□□□ -2.16
MMP13P45452 SNORD115-20-201ENST00000365099 82 ntBASIC1.54□□□□□ -2.16
MMP13P45452 MIR653-201ENST00000385279 96 ntBASIC1.54□□□□□ -2.16
MMP13P45452 SNORD41-201ENST00000386967 70 ntBASIC1.54□□□□□ -2.16
MMP13P45452 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
MMP13P45452 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.54□□□□□ -2.16
MMP13P45452 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
MMP13P45452 AL022718.1-201ENST00000412004 84 ntBASIC1.54□□□□□ -2.16
MMP13P45452 MIR548AO-201ENST00000579992 96 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 179 ms