Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNU6-1154P-201ENST00000391001 104 ntBASIC1.75□□□□□ -2.13
VAMP1P23763 RNA5SP184-201ENST00000411071 108 ntBASIC1.75□□□□□ -2.13
VAMP1P23763 AC063976.4-201ENST00000421971 163 ntBASIC1.75□□□□□ -2.13
VAMP1P23763 AC244023.1-201ENST00000426884 112 ntBASIC1.75□□□□□ -2.13
VAMP1P23763 COX6CP6-201ENST00000490840 228 ntBASIC1.75□□□□□ -2.13
VAMP1P23763 RNA5SP200-201ENST00000516360 103 ntBASIC1.75□□□□□ -2.13
VAMP1P23763 RNA5SP148-201ENST00000516527 94 ntBASIC1.75□□□□□ -2.13
VAMP1P23763 EIF4BP1-201ENST00000554881 351 ntBASIC1.75□□□□□ -2.13
VAMP1P23763 AC242498.1-201ENST00000604134 111 ntBASIC1.75□□□□□ -2.13
VAMP1P23763 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VAMP1P23763 U8.2-201ENST00000363156 134 ntBASIC1.74□□□□□ -2.13
VAMP1P23763 Y_RNA.363-201ENST00000365529 113 ntBASIC1.74□□□□□ -2.13
VAMP1P23763 SNORD111-201ENST00000408139 94 ntBASIC1.74□□□□□ -2.13
VAMP1P23763 snoU13.2-201ENST00000459201 104 ntBASIC1.74□□□□□ -2.13
VAMP1P23763 IGKV1-22-201ENST00000524313 326 ntBASIC1.74□□□□□ -2.13
VAMP1P23763 AC006386.2-201ENST00000624491 75 ntBASIC1.74□□□□□ -2.13
VAMP1P23763 AC012005.1-201ENST00000624575 75 ntBASIC1.74□□□□□ -2.13
VAMP1P23763 U6.95-201ENST00000636931 70 ntBASIC1.74□□□□□ -2.13
VAMP1P23763 Y_RNA.168-201ENST00000363740 102 ntBASIC1.73□□□□□ -2.13
VAMP1P23763 SNORA80A-201ENST00000363922 136 ntBASIC1.73□□□□□ -2.13
VAMP1P23763 SNORD26-201ENST00000384147 75 ntBASIC1.73□□□□□ -2.13
VAMP1P23763 RNU6-22P-201ENST00000384355 107 ntBASIC1.73□□□□□ -2.13
VAMP1P23763 RNU4-69P-201ENST00000410677 143 ntBASIC1.73□□□□□ -2.13
VAMP1P23763 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.73□□□□□ -2.13
VAMP1P23763 UBE2DNL-203ENST00000474922 222 ntBASIC1.73□□□□□ -2.13
VAMP1P23763 MIR3163-201ENST00000581592 73 ntBASIC1.73□□□□□ -2.13
VAMP1P23763 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VAMP1P23763 Y_RNA.198-201ENST00000364013 98 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 Y_RNA.470-201ENST00000384307 117 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 RNU6-1081P-201ENST00000384537 107 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 RNU6-1086P-201ENST00000410930 100 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 RNU6-659P-201ENST00000516454 104 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 RNU7-6P-201ENST00000516845 62 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 RNU6-1258P-201ENST00000516911 111 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 MIR4298-201ENST00000584380 73 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 AL365222.1-201ENST00000614661 98 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 MIR6852-201ENST00000621699 66 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 MTND5P18-201ENST00000445624 1801 ntBASIC1.72□□□□□ -2.13
VAMP1P23763 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
VAMP1P23763 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
VAMP1P23763 SUMO2P12-201ENST00000405924 140 ntBASIC1.71□□□□□ -2.14
VAMP1P23763 RNU6-1165P-201ENST00000410119 107 ntBASIC1.71□□□□□ -2.14
VAMP1P23763 AC022523.2-201ENST00000561045 150 ntBASIC1.71□□□□□ -2.14
VAMP1P23763 MIR4319-201ENST00000577285 85 ntBASIC1.71□□□□□ -2.14
VAMP1P23763 MIR548AI-201ENST00000579940 88 ntBASIC1.71□□□□□ -2.14
VAMP1P23763 MIR548AE2-201ENST00000583456 67 ntBASIC1.71□□□□□ -2.14
VAMP1P23763 AC012676.2-201ENST00000619258 186 ntBASIC1.71□□□□□ -2.14
VAMP1P23763 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
VAMP1P23763 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
VAMP1P23763 SNORD115-2-201ENST00000362842 82 ntBASIC1.7□□□□□ -2.14
VAMP1P23763 SNORD115-20-201ENST00000365099 82 ntBASIC1.7□□□□□ -2.14
VAMP1P23763 RNU6-342P-201ENST00000384521 104 ntBASIC1.7□□□□□ -2.14
VAMP1P23763 RNU6-997P-201ENST00000384725 107 ntBASIC1.7□□□□□ -2.14
VAMP1P23763 RPS23P4-201ENST00000487908 423 ntBASIC1.7□□□□□ -2.14
VAMP1P23763 AC106800.4-201ENST00000614905 153 ntBASIC1.7□□□□□ -2.14
VAMP1P23763 AC062016.1-201ENST00000355719 319 ntBASIC1.69□□□□□ -2.14
VAMP1P23763 Y_RNA.261-201ENST00000364631 102 ntBASIC1.69□□□□□ -2.14
VAMP1P23763 Y_RNA.525-201ENST00000384570 113 ntBASIC1.69□□□□□ -2.14
VAMP1P23763 MIR548A3-201ENST00000385297 97 ntBASIC1.69□□□□□ -2.14
VAMP1P23763 RNU2-51P-201ENST00000410708 197 ntBASIC1.69□□□□□ -2.14
VAMP1P23763 Y_RNA.712-201ENST00000517011 92 ntBASIC1.69□□□□□ -2.14
VAMP1P23763 AC036111.3-201ENST00000526389 112 ntBASIC1.69□□□□□ -2.14
VAMP1P23763 AL662814.1-201ENST00000617364 121 ntBASIC1.69□□□□□ -2.14
VAMP1P23763 MIR6740-201ENST00000618268 113 ntBASIC1.69□□□□□ -2.14
VAMP1P23763 AC002429.1-201ENST00000437672 148 ntBASIC1.68□□□□□ -2.14
VAMP1P23763 RNU6-479P-201ENST00000516348 105 ntBASIC1.68□□□□□ -2.14
VAMP1P23763 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
VAMP1P23763 RNY4P6-201ENST00000363667 96 ntBASIC1.67□□□□□ -2.14
VAMP1P23763 RNA5SP508-201ENST00000411327 119 ntBASIC1.67□□□□□ -2.14
VAMP1P23763 Y_RNA.630-201ENST00000411370 108 ntBASIC1.67□□□□□ -2.14
VAMP1P23763 RNU7-79P-201ENST00000516082 62 ntBASIC1.67□□□□□ -2.14
VAMP1P23763 SNORA4-201ENST00000584302 138 ntBASIC1.67□□□□□ -2.14
VAMP1P23763 MIR4781-201ENST00000585250 76 ntBASIC1.67□□□□□ -2.14
VAMP1P23763 RNU6-94P-201ENST00000607728 107 ntBASIC1.67□□□□□ -2.14
VAMP1P23763 MIR3914-2-201ENST00000637339 95 ntBASIC1.67□□□□□ -2.14
VAMP1P23763 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VAMP1P23763 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
VAMP1P23763 RNU6-934P-201ENST00000365154 107 ntBASIC1.66□□□□□ -2.14
VAMP1P23763 MT-TF-201ENST00000387314 71 ntBASIC1.66□□□□□ -2.14
VAMP1P23763 Y_RNA.649-201ENST00000459077 103 ntBASIC1.66□□□□□ -2.14
VAMP1P23763 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.66□□□□□ -2.14
VAMP1P23763 MTND5P34-201ENST00000568888 325 ntBASIC1.66□□□□□ -2.14
VAMP1P23763 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.66□□□□□ -2.14
VAMP1P23763 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VAMP1P23763 RNU6-1104P-201ENST00000384723 104 ntBASIC1.65□□□□□ -2.15
VAMP1P23763 RNU6-1168P-201ENST00000390831 104 ntBASIC1.65□□□□□ -2.15
VAMP1P23763 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.65□□□□□ -2.15
VAMP1P23763 MIR18B-201ENST00000454574 71 ntBASIC1.65□□□□□ -2.15
VAMP1P23763 AC141846.1-201ENST00000568348 142 ntBASIC1.65□□□□□ -2.15
VAMP1P23763 AL670379.3-201ENST00000605040 251 ntBASIC1.65□□□□□ -2.15
VAMP1P23763 AC027335.2-201ENST00000624030 375 ntBASIC1.65□□□□□ -2.15
VAMP1P23763 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.65□□□□□ -2.15
VAMP1P23763 MIR100-201ENST00000385259 80 ntBASIC1.64□□□□□ -2.15
VAMP1P23763 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.64□□□□□ -2.15
VAMP1P23763 SNORD83.1-201ENST00000411362 77 ntBASIC1.64□□□□□ -2.15
VAMP1P23763 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
VAMP1P23763 MIR4771-2-201ENST00000577758 74 ntBASIC1.64□□□□□ -2.15
VAMP1P23763 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.64□□□□□ -2.15
VAMP1P23763 MIR4771-1-201ENST00000582617 74 ntBASIC1.64□□□□□ -2.15
VAMP1P23763 AC104984.5-201ENST00000586878 94 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms