Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 Y_RNA.437-201ENST00000384113 113 ntBASIC2.53□□□□□ -2
NFKB1P19838 MIR27B-201ENST00000385129 97 ntBASIC2.53□□□□□ -2
NFKB1P19838 RNA5SP100-201ENST00000410903 110 ntBASIC2.53□□□□□ -2
NFKB1P19838 RNA5SP59-201ENST00000410922 110 ntBASIC2.53□□□□□ -2
NFKB1P19838 RNU6-1086P-201ENST00000410930 100 ntBASIC2.53□□□□□ -2
NFKB1P19838 AC234781.5-201ENST00000508429 271 ntBASIC2.53□□□□□ -2
NFKB1P19838 RNU7-79P-201ENST00000516082 62 ntBASIC2.53□□□□□ -2
NFKB1P19838 RNU6-917P-201ENST00000516294 104 ntBASIC2.53□□□□□ -2
NFKB1P19838 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.53□□□□□ -2
NFKB1P19838 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.53□□□□□ -2
NFKB1P19838 CYP3A52P-201ENST00000563326 91 ntBASIC2.53□□□□□ -2
NFKB1P19838 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.53□□□□□ -2
NFKB1P19838 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.53□□□□□ -2
NFKB1P19838 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
NFKB1P19838 AC006160.2-201ENST00000637708 154 ntBASIC2.53□□□□□ -2
NFKB1P19838 RNU6-1123P-201ENST00000362347 106 ntBASIC2.52□□□□□ -2.01
NFKB1P19838 SNORD114-10-201ENST00000363409 72 ntBASIC2.52□□□□□ -2.01
NFKB1P19838 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
NFKB1P19838 Y_RNA.313-201ENST00000365095 103 ntBASIC2.52□□□□□ -2.01
NFKB1P19838 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
NFKB1P19838 RNU7-137P-201ENST00000516788 62 ntBASIC2.52□□□□□ -2.01
NFKB1P19838 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
NFKB1P19838 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
NFKB1P19838 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NFKB1P19838 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NFKB1P19838 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 Y_RNA.4-201ENST00000362333 112 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-509P-201ENST00000363519 107 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-1125P-201ENST00000363601 107 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-1321P-201ENST00000390905 107 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 MIR548G-201ENST00000408442 89 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-447P-201ENST00000410293 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-1118P-201ENST00000410382 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-1076P-201ENST00000410397 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-355P-201ENST00000410427 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-791P-201ENST00000410467 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-705P-201ENST00000410601 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 Y_RNA.611-201ENST00000410682 108 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-1100P-201ENST00000410691 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-860P-201ENST00000410860 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-1217P-201ENST00000411276 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNU6-785P-201ENST00000411324 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 RNA5SP270-201ENST00000411361 118 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.51□□□□□ -2.01
NFKB1P19838 U6.90-201ENST00000614007 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 U6.70-201ENST00000620287 104 ntBASIC2.51□□□□□ -2.01
NFKB1P19838 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
NFKB1P19838 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NFKB1P19838 AC080100.1-201ENST00000624239 5356 ntBASIC2.5□□□□□ -2.01
NFKB1P19838 Y_RNA.567-201ENST00000384736 106 ntBASIC2.5□□□□□ -2.01
NFKB1P19838 MIR520C-201ENST00000385005 87 ntBASIC2.5□□□□□ -2.01
NFKB1P19838 RNU6-857P-201ENST00000515893 110 ntBASIC2.5□□□□□ -2.01
NFKB1P19838 SNORD14A-201ENST00000606526 91 ntBASIC2.5□□□□□ -2.01
NFKB1P19838 MIR6817-201ENST00000615588 66 ntBASIC2.5□□□□□ -2.01
NFKB1P19838 MIR548BB-201ENST00000626714 66 ntBASIC2.5□□□□□ -2.01
NFKB1P19838 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NFKB1P19838 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NFKB1P19838 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NFKB1P19838 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.49□□□□□ -2.01
NFKB1P19838 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
NFKB1P19838 RNU6-633P-201ENST00000362612 103 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 RNA5SP68-201ENST00000363885 119 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 Y_RNA.221-201ENST00000364248 96 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 RNU6-360P-201ENST00000390944 104 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 RNA5SP450-201ENST00000411206 102 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 RNA5SP148-201ENST00000516527 94 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 SNORA31.17-201ENST00000516953 127 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 MIR548AO-201ENST00000579992 96 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 MIR4672-201ENST00000583126 81 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 RNU6-90P-201ENST00000606352 106 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 U4.3-201ENST00000621047 82 ntBASIC2.49□□□□□ -2.01
NFKB1P19838 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.49□□□□□ -2.01
NFKB1P19838 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NFKB1P19838 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
NFKB1P19838 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NFKB1P19838 Y_RNA.191-201ENST00000363972 113 ntBASIC2.48□□□□□ -2.01
NFKB1P19838 Y_RNA.609-201ENST00000410669 89 ntBASIC2.48□□□□□ -2.01
NFKB1P19838 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.48□□□□□ -2.01
NFKB1P19838 RNU7-48P-201ENST00000458875 63 ntBASIC2.48□□□□□ -2.01
NFKB1P19838 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.48□□□□□ -2.01
NFKB1P19838 MIR5194-201ENST00000582634 120 ntBASIC2.48□□□□□ -2.01
NFKB1P19838 AC105081.1-201ENST00000617727 106 ntBASIC2.48□□□□□ -2.01
NFKB1P19838 MIR4251-201ENST00000635819 61 ntBASIC2.48□□□□□ -2.01
NFKB1P19838 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.48□□□□□ -2.01
NFKB1P19838 SNORD38.2-201ENST00000384470 69 ntBASIC2.47□□□□□ -2.01
NFKB1P19838 MIR1261-201ENST00000408659 82 ntBASIC2.47□□□□□ -2.01
NFKB1P19838 RPL31P63-201ENST00000422565 375 ntBASIC2.47□□□□□ -2.01
NFKB1P19838 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NFKB1P19838 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.01
NFKB1P19838 Y_RNA.98-201ENST00000363109 102 ntBASIC2.46□□□□□ -2.02
NFKB1P19838 Y_RNA.173-201ENST00000363776 113 ntBASIC2.46□□□□□ -2.02
NFKB1P19838 MIR653-201ENST00000385279 96 ntBASIC2.46□□□□□ -2.02
NFKB1P19838 AL359511.1-201ENST00000402970 211 ntBASIC2.46□□□□□ -2.02
NFKB1P19838 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.46□□□□□ -2.02
NFKB1P19838 SPINT5P-201ENST00000448174 155 ntBASIC2.46□□□□□ -2.02
NFKB1P19838 SNORA31.25-201ENST00000517242 134 ntBASIC2.46□□□□□ -2.02
NFKB1P19838 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.46□□□□□ -2.02
NFKB1P19838 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NFKB1P19838 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.45□□□□□ -2.02
NFKB1P19838 MIR21-201ENST00000362134 72 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 225.2 ms