Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC055731.1-201ENST00000474387 401 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 RNA5SP458-201ENST00000516188 119 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 RNU6-1018P-201ENST00000516577 106 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 SCARNA16.3-201ENST00000516595 184 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 RNA5SP33-201ENST00000516687 98 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.02□□□□□ -1.93
CSB-PGBD3P0DP91 SNORA22.1-201ENST00000362701 134 ntBASIC3.01□□□□□ -1.93
CSB-PGBD3P0DP91 SNORA26.6-201ENST00000391256 115 ntBASIC3.01□□□□□ -1.93
CSB-PGBD3P0DP91 HMGN2P23-201ENST00000456759 269 ntBASIC3.01□□□□□ -1.93
CSB-PGBD3P0DP91 RNA5SP168-201ENST00000516642 112 ntBASIC3.01□□□□□ -1.93
CSB-PGBD3P0DP91 MIR4668-201ENST00000582284 70 ntBASIC3.01□□□□□ -1.93
CSB-PGBD3P0DP91 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CSB-PGBD3P0DP91 RNU6-1313P-201ENST00000362622 102 ntBASIC3□□□□□ -1.93
CSB-PGBD3P0DP91 Y_RNA.96-201ENST00000363092 109 ntBASIC3□□□□□ -1.93
CSB-PGBD3P0DP91 Y_RNA.247-201ENST00000364500 92 ntBASIC3□□□□□ -1.93
CSB-PGBD3P0DP91 SNORA67.1-201ENST00000364749 141 ntBASIC3□□□□□ -1.93
CSB-PGBD3P0DP91 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CSB-PGBD3P0DP91 SNORA32-201ENST00000384072 121 ntBASIC2.99□□□□□ -1.93
CSB-PGBD3P0DP91 RNY1P4-201ENST00000384595 115 ntBASIC2.99□□□□□ -1.93
CSB-PGBD3P0DP91 MIR516B2-201ENST00000385190 85 ntBASIC2.99□□□□□ -1.93
CSB-PGBD3P0DP91 SNORD77B-201ENST00000391112 67 ntBASIC2.99□□□□□ -1.93
CSB-PGBD3P0DP91 AL023284.1-201ENST00000403956 276 ntBASIC2.99□□□□□ -1.93
CSB-PGBD3P0DP91 Y_RNA.676-201ENST00000516393 96 ntBASIC2.99□□□□□ -1.93
CSB-PGBD3P0DP91 MIR376B-201ENST00000614515 100 ntBASIC2.99□□□□□ -1.93
CSB-PGBD3P0DP91 AL512310.12-203ENST00000640543 90 ntBASIC2.99□□□□□ -1.93
CSB-PGBD3P0DP91 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.99□□□□□ -1.93
CSB-PGBD3P0DP91 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 RNA5SP393-201ENST00000363423 117 ntBASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 Y_RNA.191-201ENST00000363972 113 ntBASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 RNU6-1296P-201ENST00000383879 107 ntBASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 U8.15-201ENST00000390947 134 ntBASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 SNORA31.17-201ENST00000516953 127 ntBASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 RNU6-958P-201ENST00000516995 106 ntBASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 AC021506.2-201ENST00000612354 169 ntBASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 MIR219B-201ENST00000637023 88 ntBASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CSB-PGBD3P0DP91 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 RNU6-833P-201ENST00000363486 107 ntBASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 SNORD58A-201ENST00000383875 65 ntBASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 UBL5P1-201ENST00000507979 193 ntBASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 AC108729.3-201ENST00000513484 108 ntBASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 RNU7-12P-201ENST00000516030 62 ntBASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 MIR6766-201ENST00000622641 72 ntBASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 AC006160.2-201ENST00000637708 154 ntBASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.97□□□□□ -1.93
CSB-PGBD3P0DP91 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CSB-PGBD3P0DP91 MIR21-201ENST00000362134 72 ntBASIC2.96□□□□□ -1.94
CSB-PGBD3P0DP91 Y_RNA.4-201ENST00000362333 112 ntBASIC2.96□□□□□ -1.94
CSB-PGBD3P0DP91 SNORA1.1-201ENST00000364671 133 ntBASIC2.96□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-913P-201ENST00000390913 95 ntBASIC2.96□□□□□ -1.94
CSB-PGBD3P0DP91 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CSB-PGBD3P0DP91 SNORA31.15-201ENST00000516771 132 ntBASIC2.96□□□□□ -1.94
CSB-PGBD3P0DP91 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.96□□□□□ -1.94
CSB-PGBD3P0DP91 MIR4791-201ENST00000607666 84 ntBASIC2.96□□□□□ -1.94
CSB-PGBD3P0DP91 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 RNA5SP276-201ENST00000362580 94 ntBASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 Y_RNA.370-201ENST00000365589 108 ntBASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 Y_RNA.426-201ENST00000384068 113 ntBASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-1307P-201ENST00000391012 103 ntBASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 Y_RNA.611-201ENST00000410682 108 ntBASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 AC090844.1-201ENST00000422019 156 ntBASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 MIR3152-201ENST00000579801 74 ntBASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 AC096720.1-201ENST00000604441 183 ntBASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 MIR6717-201ENST00000622747 73 ntBASIC2.95□□□□□ -1.94
CSB-PGBD3P0DP91 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CSB-PGBD3P0DP91 SNORD116-10-201ENST00000363791 102 ntBASIC2.94□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-24P-201ENST00000384440 107 ntBASIC2.94□□□□□ -1.94
CSB-PGBD3P0DP91 RNU7-67P-201ENST00000459003 62 ntBASIC2.94□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-1006P-201ENST00000516998 103 ntBASIC2.94□□□□□ -1.94
CSB-PGBD3P0DP91 AL513423.1-201ENST00000621695 132 ntBASIC2.94□□□□□ -1.94
CSB-PGBD3P0DP91 MIR6132-201ENST00000622083 109 ntBASIC2.94□□□□□ -1.94
CSB-PGBD3P0DP91 AC010297.1-201ENST00000623948 149 ntBASIC2.94□□□□□ -1.94
CSB-PGBD3P0DP91 SNORA24-201ENST00000384096 131 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 SNORD28B-201ENST00000390993 75 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 AC093850.1-201ENST00000454121 251 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 RPS29P29-201ENST00000456396 171 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 AC099513.1-201ENST00000490423 301 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 RNU7-53P-201ENST00000516705 60 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-295P-201ENST00000516901 104 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 MIR4439-201ENST00000583746 80 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-86P-201ENST00000606534 107 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 AC103810.7-201ENST00000607821 91 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 SEPT14P17-201ENST00000617978 177 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 MIR548BB-201ENST00000626714 66 ntBASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CSB-PGBD3P0DP91 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 Y_RNA.140-201ENST00000363474 103 ntBASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-1163P-201ENST00000364516 107 ntBASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 SNORA1.2-201ENST00000365189 134 ntBASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-652P-201ENST00000365488 107 ntBASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 Y_RNA.430-201ENST00000384081 110 ntBASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 RNU1-138P-201ENST00000384093 164 ntBASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 SNORA70.7-201ENST00000384159 133 ntBASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 RNU6-360P-201ENST00000390944 104 ntBASIC2.92□□□□□ -1.94
CSB-PGBD3P0DP91 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms