Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC131055.1-201ENST00000584626 316 ntBASIC0.85□□□□□ -2.27
HOXC4P09017 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
HOXC4P09017 MIR4791-201ENST00000607666 84 ntBASIC0.85□□□□□ -2.27
HOXC4P09017 GHRLOS.1-201ENST00000610995 70 ntBASIC0.85□□□□□ -2.27
HOXC4P09017 MTND1P7-201ENST00000632801 297 ntBASIC0.85□□□□□ -2.27
HOXC4P09017 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.84□□□□□ -2.27
HOXC4P09017 SNORA25.3-201ENST00000363205 127 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 RNU6-309P-201ENST00000364573 106 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 Y_RNA.351-201ENST00000365436 96 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 Y_RNA.420-201ENST00000384043 110 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 Y_RNA.508-201ENST00000384502 114 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 Y_RNA.568-201ENST00000384742 113 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 RNU6-913P-201ENST00000390913 95 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 MIR513C-201ENST00000401352 84 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 RNU6-257P-201ENST00000410238 98 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 RNU6-1190P-201ENST00000410811 104 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 AC004941.2-201ENST00000427009 228 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 RNU6-322P-201ENST00000516010 103 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 SNORD111.1-201ENST00000516421 86 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 RNU6-958P-201ENST00000516995 106 ntBASIC0.84□□□□□ -2.27
HOXC4P09017 SNORD115-34-201ENST00000362441 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-12-201ENST00000362583 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-29-201ENST00000362834 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-9-201ENST00000362912 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-21-201ENST00000362963 81 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-14-201ENST00000363090 81 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-13-201ENST00000363358 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-41-201ENST00000363608 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-11-201ENST00000363616 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-5-201ENST00000363633 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-39-201ENST00000363694 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-4-201ENST00000363810 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-16-201ENST00000363887 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-6-201ENST00000363942 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-42-201ENST00000364273 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-15-201ENST00000364809 81 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 RNU6-915P-201ENST00000364943 103 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-1-201ENST00000364961 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-26-201ENST00000365067 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-10-201ENST00000365073 81 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-43-201ENST00000365503 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-36-201ENST00000365629 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 Y_RNA.584-201ENST00000391090 114 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 AL603908.1-201ENST00000406098 201 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
HOXC4P09017 RNU2-11P-201ENST00000459191 187 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 Y_RNA.651-201ENST00000459380 103 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 RNU7-43P-201ENST00000516554 64 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORA70.22-201ENST00000517160 124 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 CYP3A137P-201ENST00000562436 69 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 MIR548AO-201ENST00000579992 96 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 MIR151B-201ENST00000584249 96 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 SNORD115-40-201ENST00000606510 82 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 AC243994.1-201ENST00000618627 109 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 AC091932.4-201ENST00000623386 200 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 AC008133.2-201ENST00000624540 351 ntBASIC0.83□□□□□ -2.28
HOXC4P09017 AC010332.2-201ENST00000613083 1904 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 SNORA1.2-201ENST00000365189 134 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 SNORA24-201ENST00000384096 131 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 RNU6-42P-201ENST00000384165 107 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 MIR1302-7-201ENST00000408841 72 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 AC090844.1-201ENST00000422019 156 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 MTND4LP9-201ENST00000427694 174 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 HMGN1P33-201ENST00000432945 451 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 RNU7-67P-201ENST00000459003 62 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 RPS29P24-201ENST00000486345 171 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 RNU6-998P-201ENST00000515894 101 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 MIR4661-201ENST00000582720 75 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 AL078603.1-201ENST00000603824 313 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 AC108081.1-201ENST00000604358 221 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 AL596211.1-201ENST00000569873 2277 ntBASIC0.82□□□□□ -2.28
HOXC4P09017 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 SNORA51.10-201ENST00000384418 136 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 Y_RNA.537-201ENST00000384626 109 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.81□□□□□ -2.28
HOXC4P09017 AL035398.1-201ENST00000430869 322 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.81□□□□□ -2.28
HOXC4P09017 AC048334.1-201ENST00000477975 159 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.81□□□□□ -2.28
HOXC4P09017 Y_RNA.690-201ENST00000516603 95 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 RNU6-1223P-201ENST00000517124 104 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 MIR4251-201ENST00000635819 61 ntBASIC0.81□□□□□ -2.28
HOXC4P09017 RNU6-349P-201ENST00000362402 107 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 Y_RNA.120-201ENST00000363304 110 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 RNU6-704P-201ENST00000364162 103 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 RNU4-16P-201ENST00000364737 141 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 Y_RNA.343-201ENST00000365354 112 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 Y_RNA.586-201ENST00000391146 98 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 snoU13.18-201ENST00000459483 104 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 AC107297.1-201ENST00000459991 176 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 RNU5E-3P-201ENST00000515913 68 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 IGKV1-22-201ENST00000524313 326 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
HOXC4P09017 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 216.6 ms