Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 RNU6-949P-201ENST00000384040 107 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 SNORD115-46-201ENST00000390982 71 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 RNA5SP163-201ENST00000410304 99 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 SNORD19B-201ENST00000459623 84 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 RNU6-976P-201ENST00000516086 111 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 U6atac.1-201ENST00000616025 117 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 snoU18.1-201ENST00000629629 71 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 MIR1295B-201ENST00000636144 60 ntBASIC-0.35□□□□□ -2.47
UPK1BO75841 SNORA63.5-201ENST00000363548 123 ntBASIC-0.36□□□□□ -2.47
UPK1BO75841 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.36□□□□□ -2.47
UPK1BO75841 RNU6-652P-201ENST00000365488 107 ntBASIC-0.36□□□□□ -2.47
UPK1BO75841 RNU6-484P-201ENST00000384016 107 ntBASIC-0.36□□□□□ -2.47
UPK1BO75841 MIR501-201ENST00000390204 84 ntBASIC-0.36□□□□□ -2.47
UPK1BO75841 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.36□□□□□ -2.47
UPK1BO75841 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.36□□□□□ -2.47
UPK1BO75841 AC138393.2-201ENST00000414742 246 ntBASIC-0.36□□□□□ -2.47
UPK1BO75841 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 RNY1P13-201ENST00000365030 105 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 SNORA18-201ENST00000384416 132 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 SNORA20-201ENST00000384662 132 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 MIR1302-11-201ENST00000408051 138 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 MIR1302-9-201ENST00000408365 138 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 MIR1302-10-201ENST00000408734 138 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 RNU7-165P-201ENST00000458864 60 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 RNU7-80P-201ENST00000459562 61 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 RNA5SP330-201ENST00000517096 96 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 MIR1302-2-201ENST00000607096 138 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 SNORA70.25-201ENST00000612741 95 ntBASIC-0.37□□□□□ -2.47
UPK1BO75841 SNORA25.1-201ENST00000362326 128 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 SNORA22.1-201ENST00000362701 134 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 RNU6-290P-201ENST00000365212 101 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 MIR214-201ENST00000385214 110 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 MT-TT-201ENST00000387460 66 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 AC108059.2-201ENST00000434626 151 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 SNRPGP8-201ENST00000454064 226 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 RNU6-531P-201ENST00000516694 104 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 RNU6-897P-201ENST00000517135 105 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 DEFB131E-201ENST00000532329 154 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 MIR3129-201ENST00000581095 76 ntBASIC-0.38□□□□□ -2.47
UPK1BO75841 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 SNORA8.3-201ENST00000384679 139 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 RNU6-269P-201ENST00000391077 97 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 MIR2909-201ENST00000617113 69 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 AC067863.3-201ENST00000624172 122 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 MIR6841-201ENST00000637129 72 ntBASIC-0.39□□□□□ -2.47
UPK1BO75841 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 MIR613-201ENST00000385248 95 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 MIR548L-201ENST00000408303 86 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 RNU6-121P-201ENST00000410525 99 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 RNU2-55P-201ENST00000411146 174 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 AL731563.1-201ENST00000442202 214 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.4□□□□□ -2.47
UPK1BO75841 AC104692.1-201ENST00000472406 90 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 RNU6-475P-201ENST00000516073 104 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 RNA5SP153-201ENST00000516498 76 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 MIR5688-201ENST00000580619 83 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 MIR5197-201ENST00000583721 112 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 AC090574.1-201ENST00000623186 233 ntBASIC-0.4□□□□□ -2.47
UPK1BO75841 RNU6-161P-201ENST00000363051 106 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 SNORD115-24-201ENST00000363528 82 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 RNU6-726P-201ENST00000364680 107 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 SNORD114-12-201ENST00000365400 75 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 MIR626-201ENST00000385032 94 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 SNORA27.4-201ENST00000516650 95 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
UPK1BO75841 AP003072.1-201ENST00000531740 145 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 AC021613.1-201ENST00000623880 111 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 MTND5P32-201ENST00000560711 1802 ntBASIC-0.41□□□□□ -2.48
UPK1BO75841 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 RNU6-450P-201ENST00000364654 107 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 RNY3P1-201ENST00000365085 102 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 SNORA53-201ENST00000391141 249 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 SNORD4A-201ENST00000459174 72 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.42□□□□□ -2.48
UPK1BO75841 MIR548AD-201ENST00000584780 82 ntBASIC-0.42□□□□□ -2.48
UPK1BO75841 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms