Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SNORD3E-202ENST00000627253 216 ntBASIC2.82□□□□□ -1.96
PTCD1O75127 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PTCD1O75127 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PTCD1O75127 SNORD115-27-201ENST00000364430 82 ntBASIC2.81□□□□□ -1.96
PTCD1O75127 SNORD58A-201ENST00000383875 65 ntBASIC2.81□□□□□ -1.96
PTCD1O75127 RNA5SP450-201ENST00000411206 102 ntBASIC2.81□□□□□ -1.96
PTCD1O75127 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PTCD1O75127 RNU7-193P-201ENST00000516723 65 ntBASIC2.81□□□□□ -1.96
PTCD1O75127 MIR4529-201ENST00000578110 78 ntBASIC2.81□□□□□ -1.96
PTCD1O75127 SEPT14P17-201ENST00000617978 177 ntBASIC2.81□□□□□ -1.96
PTCD1O75127 AL513423.1-201ENST00000621695 132 ntBASIC2.81□□□□□ -1.96
PTCD1O75127 MIR4662A-201ENST00000637499 67 ntBASIC2.81□□□□□ -1.96
PTCD1O75127 RNU6-509P-201ENST00000363519 107 ntBASIC2.8□□□□□ -1.96
PTCD1O75127 Y_RNA.316-201ENST00000365118 111 ntBASIC2.8□□□□□ -1.96
PTCD1O75127 SNORA1.2-201ENST00000365189 134 ntBASIC2.8□□□□□ -1.96
PTCD1O75127 MIR660-201ENST00000385235 97 ntBASIC2.8□□□□□ -1.96
PTCD1O75127 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.8□□□□□ -1.96
PTCD1O75127 UBL5P1-201ENST00000507979 193 ntBASIC2.8□□□□□ -1.96
PTCD1O75127 SNORA31.25-201ENST00000517242 134 ntBASIC2.8□□□□□ -1.96
PTCD1O75127 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PTCD1O75127 Y_RNA.370-201ENST00000365589 108 ntBASIC2.79□□□□□ -1.96
PTCD1O75127 RNU6-788P-201ENST00000390967 104 ntBASIC2.79□□□□□ -1.96
PTCD1O75127 RNU6-1307P-201ENST00000391012 103 ntBASIC2.79□□□□□ -1.96
PTCD1O75127 RNU7-113P-201ENST00000459273 62 ntBASIC2.79□□□□□ -1.96
PTCD1O75127 AC099513.1-201ENST00000490423 301 ntBASIC2.79□□□□□ -1.96
PTCD1O75127 AC103810.7-201ENST00000607821 91 ntBASIC2.79□□□□□ -1.96
PTCD1O75127 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTCD1O75127 RNU6-1313P-201ENST00000362622 102 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 RNU6-1190P-201ENST00000410811 104 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 RNA5SP100-201ENST00000410903 110 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 RNA5SP59-201ENST00000410922 110 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 AC090844.1-201ENST00000422019 156 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 RPL23AP42-201ENST00000471152 471 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 RNA5SP200-201ENST00000516360 103 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.78□□□□□ -1.96
PTCD1O75127 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.78□□□□□ -1.96
PTCD1O75127 RNU7-67P-201ENST00000459003 62 ntBASIC2.77□□□□□ -1.97
PTCD1O75127 SNORA31.17-201ENST00000516953 127 ntBASIC2.77□□□□□ -1.97
PTCD1O75127 MIR6132-201ENST00000622083 109 ntBASIC2.77□□□□□ -1.97
PTCD1O75127 MIR6841-201ENST00000637129 72 ntBASIC2.77□□□□□ -1.97
PTCD1O75127 AL442644.1-201ENST00000454390 3105 ntBASIC2.77□□□□□ -1.97
PTCD1O75127 SNORD115-2-201ENST00000362842 82 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 SNORD116-10-201ENST00000363791 102 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 RNU6-1229P-201ENST00000364295 107 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 SNORD115-20-201ENST00000365099 82 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 DEFA7P-201ENST00000382676 285 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 SNORA32-201ENST00000384072 121 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 MIR526A1-201ENST00000384897 85 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 U8.13-201ENST00000390842 128 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 RNA5SP33-201ENST00000516687 98 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 RNU6-1006P-201ENST00000516998 103 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 RNU6-86P-201ENST00000606534 107 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 AL512310.12-203ENST00000640543 90 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 AC005336.3-201ENST00000623833 2679 ntBASIC2.76□□□□□ -1.97
PTCD1O75127 RNU6-633P-201ENST00000362612 103 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 RNU6-1163P-201ENST00000364516 107 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 SNORA1.1-201ENST00000364671 133 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 SNORA70.7-201ENST00000384159 133 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 Y_RNA.607-201ENST00000410597 98 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 Y_RNA.609-201ENST00000410669 89 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 AC108729.3-201ENST00000513484 108 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 RNU6-295P-201ENST00000516901 104 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 RNU6-958P-201ENST00000516995 106 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 AC020891.4-201ENST00000605745 93 ntBASIC2.75□□□□□ -1.97
PTCD1O75127 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
PTCD1O75127 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PTCD1O75127 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PTCD1O75127 Y_RNA.96-201ENST00000363092 109 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 Y_RNA.430-201ENST00000384081 110 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 Y_RNA.565-201ENST00000384719 101 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 SNORA26.6-201ENST00000391256 115 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 SNORD123-201ENST00000459473 70 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 MIR5194-201ENST00000582634 120 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 MIR4712-201ENST00000583750 82 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 FAM106DP-201ENST00000586416 501 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.74□□□□□ -1.97
PTCD1O75127 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 AC080100.1-201ENST00000624239 5356 ntBASIC2.74□□□□□ -1.97
PTCD1O75127 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PTCD1O75127 MIR424-201ENST00000362227 98 ntBASIC2.73□□□□□ -1.97
PTCD1O75127 SNORA22.1-201ENST00000362701 134 ntBASIC2.73□□□□□ -1.97
PTCD1O75127 Y_RNA.299-201ENST00000364973 94 ntBASIC2.73□□□□□ -1.97
PTCD1O75127 RNU6-524P-201ENST00000384270 107 ntBASIC2.73□□□□□ -1.97
PTCD1O75127 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.73□□□□□ -1.97
PTCD1O75127 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
PTCD1O75127 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PTCD1O75127 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCD1O75127 Y_RNA.140-201ENST00000363474 103 ntBASIC2.72□□□□□ -1.97
PTCD1O75127 RNU6-457P-201ENST00000363999 107 ntBASIC2.72□□□□□ -1.97
PTCD1O75127 RNU6-1319P-201ENST00000390855 104 ntBASIC2.72□□□□□ -1.97
PTCD1O75127 RNU6-747P-201ENST00000390928 104 ntBASIC2.72□□□□□ -1.97
PTCD1O75127 SNORD28B-201ENST00000390993 75 ntBASIC2.72□□□□□ -1.97
PTCD1O75127 RNU6-241P-201ENST00000391148 104 ntBASIC2.72□□□□□ -1.97
PTCD1O75127 RNU6-177P-201ENST00000411257 104 ntBASIC2.72□□□□□ -1.97
PTCD1O75127 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.72□□□□□ -1.97
PTCD1O75127 MIR548AR-201ENST00000582191 57 ntBASIC2.72□□□□□ -1.97
PTCD1O75127 Y_RNA.783-201ENST00000613546 102 ntBASIC2.72□□□□□ -1.97
PTCD1O75127 Z82195.2-201ENST00000612348 18351 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 267.5 ms