Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RNU7-70P-201ENST00000516941 66 ntBASIC0.87□□□□□ -2.27
TO15178 RNU6-388P-201ENST00000517012 105 ntBASIC0.87□□□□□ -2.27
TO15178 RNU6-389P-201ENST00000517048 105 ntBASIC0.87□□□□□ -2.27
TO15178 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.87□□□□□ -2.27
TO15178 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.87□□□□□ -2.27
TO15178 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.87□□□□□ -2.27
TO15178 AL136317.1-201ENST00000612653 226 ntBASIC0.87□□□□□ -2.27
TO15178 AC078938.1-201ENST00000620993 318 ntBASIC0.87□□□□□ -2.27
TO15178 MIR376A2-201ENST00000636782 80 ntBASIC0.87□□□□□ -2.27
TO15178 Y_RNA.274-201ENST00000364714 101 ntBASIC0.86□□□□□ -2.27
TO15178 RNU6-597P-201ENST00000365620 102 ntBASIC0.86□□□□□ -2.27
TO15178 RNU6-205P-201ENST00000390858 107 ntBASIC0.86□□□□□ -2.27
TO15178 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.86□□□□□ -2.27
TO15178 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.86□□□□□ -2.27
TO15178 AC244023.1-201ENST00000426884 112 ntBASIC0.86□□□□□ -2.27
TO15178 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.86□□□□□ -2.27
TO15178 AC025627.3-201ENST00000582078 182 ntBASIC0.86□□□□□ -2.27
TO15178 AC242498.1-201ENST00000604134 111 ntBASIC0.86□□□□□ -2.27
TO15178 AC072026.1-201ENST00000605023 201 ntBASIC0.86□□□□□ -2.27
TO15178 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
TO15178 MIR6504-201ENST00000613520 61 ntBASIC0.86□□□□□ -2.27
TO15178 Y_RNA.191-201ENST00000363972 113 ntBASIC0.85□□□□□ -2.27
TO15178 Y_RNA.354-201ENST00000365448 111 ntBASIC0.85□□□□□ -2.27
TO15178 Y_RNA.793-201ENST00000411222 111 ntBASIC0.85□□□□□ -2.27
TO15178 RPS3AP1-201ENST00000413190 320 ntBASIC0.85□□□□□ -2.27
TO15178 HMGN1P33-201ENST00000432945 451 ntBASIC0.85□□□□□ -2.27
TO15178 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
TO15178 RNU6-1110P-201ENST00000516462 101 ntBASIC0.85□□□□□ -2.27
TO15178 RNU6-200P-201ENST00000364743 107 ntBASIC0.84□□□□□ -2.27
TO15178 MIR489-201ENST00000384923 84 ntBASIC0.84□□□□□ -2.27
TO15178 MIR613-201ENST00000385248 95 ntBASIC0.84□□□□□ -2.27
TO15178 SNORD89-201ENST00000390981 114 ntBASIC0.84□□□□□ -2.27
TO15178 RNU6-602P-201ENST00000411155 105 ntBASIC0.84□□□□□ -2.27
TO15178 RNU7-62P-201ENST00000458856 62 ntBASIC0.84□□□□□ -2.27
TO15178 AC107027.2-201ENST00000512197 115 ntBASIC0.84□□□□□ -2.27
TO15178 RNU6-113P-201ENST00000516653 101 ntBASIC0.84□□□□□ -2.27
TO15178 MIR3152-201ENST00000579801 74 ntBASIC0.84□□□□□ -2.27
TO15178 MIR6717-201ENST00000622747 73 ntBASIC0.84□□□□□ -2.27
TO15178 AC091932.4-201ENST00000623386 200 ntBASIC0.84□□□□□ -2.27
TO15178 AL596211.1-201ENST00000569873 2277 ntBASIC0.84□□□□□ -2.28
TO15178 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TO15178 MIR1-1-201ENST00000362147 71 ntBASIC0.83□□□□□ -2.28
TO15178 MIR96-201ENST00000362288 78 ntBASIC0.83□□□□□ -2.28
TO15178 RNU1-93P-201ENST00000364704 169 ntBASIC0.83□□□□□ -2.28
TO15178 RNU1-133P-201ENST00000364867 167 ntBASIC0.83□□□□□ -2.28
TO15178 Y_RNA.357-201ENST00000365487 109 ntBASIC0.83□□□□□ -2.28
TO15178 RNU6-1219P-201ENST00000516143 112 ntBASIC0.83□□□□□ -2.28
TO15178 AP002392.1-201ENST00000537692 208 ntBASIC0.83□□□□□ -2.28
TO15178 MIR6767-201ENST00000637302 66 ntBASIC0.83□□□□□ -2.28
TO15178 RNU6-934P-201ENST00000365154 107 ntBASIC0.82□□□□□ -2.28
TO15178 Y_RNA.337-201ENST00000365312 102 ntBASIC0.82□□□□□ -2.28
TO15178 Y_RNA.393-201ENST00000383936 102 ntBASIC0.82□□□□□ -2.28
TO15178 RNU6-1319P-201ENST00000390855 104 ntBASIC0.82□□□□□ -2.28
TO15178 RNU6-747P-201ENST00000390928 104 ntBASIC0.82□□□□□ -2.28
TO15178 RNU6-241P-201ENST00000391148 104 ntBASIC0.82□□□□□ -2.28
TO15178 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
TO15178 RNU6-1190P-201ENST00000410811 104 ntBASIC0.82□□□□□ -2.28
TO15178 RNU6-177P-201ENST00000411257 104 ntBASIC0.82□□□□□ -2.28
TO15178 Y_RNA.700-201ENST00000516806 100 ntBASIC0.82□□□□□ -2.28
TO15178 AC022559.1-201ENST00000520905 205 ntBASIC0.82□□□□□ -2.28
TO15178 MIR4452-201ENST00000583004 71 ntBASIC0.82□□□□□ -2.28
TO15178 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TO15178 SNORD114-27-201ENST00000363766 70 ntBASIC0.81□□□□□ -2.28
TO15178 SNORA20-201ENST00000384662 132 ntBASIC0.81□□□□□ -2.28
TO15178 MIR7-2-201ENST00000384970 110 ntBASIC0.81□□□□□ -2.28
TO15178 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
TO15178 SNORA26.6-201ENST00000391256 115 ntBASIC0.81□□□□□ -2.28
TO15178 RNU6-138P-201ENST00000515952 107 ntBASIC0.81□□□□□ -2.28
TO15178 RNU6-1149P-201ENST00000516810 97 ntBASIC0.81□□□□□ -2.28
TO15178 SCARNA15-202ENST00000516881 127 ntBASIC0.81□□□□□ -2.28
TO15178 SNORA4-201ENST00000584302 138 ntBASIC0.81□□□□□ -2.28
TO15178 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
TO15178 Y_RNA.257-201ENST00000364596 102 ntBASIC0.8□□□□□ -2.28
TO15178 Y_RNA.430-201ENST00000384081 110 ntBASIC0.8□□□□□ -2.28
TO15178 MIR608-201ENST00000384820 100 ntBASIC0.8□□□□□ -2.28
TO15178 MIR588-201ENST00000384900 83 ntBASIC0.8□□□□□ -2.28
TO15178 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
TO15178 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.8□□□□□ -2.28
TO15178 RPS26P5-201ENST00000418544 335 ntBASIC0.8□□□□□ -2.28
TO15178 MIR18B-201ENST00000454574 71 ntBASIC0.8□□□□□ -2.28
TO15178 snoU13.2-201ENST00000459201 104 ntBASIC0.8□□□□□ -2.28
TO15178 RNU7-45P-201ENST00000459460 63 ntBASIC0.8□□□□□ -2.28
TO15178 AC113410.1-201ENST00000505029 247 ntBASIC0.8□□□□□ -2.28
TO15178 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
TO15178 Y_RNA.29-201ENST00000362570 113 ntBASIC0.79□□□□□ -2.28
TO15178 RNU6-768P-201ENST00000384683 107 ntBASIC0.79□□□□□ -2.28
TO15178 RNU6-239P-201ENST00000390990 99 ntBASIC0.79□□□□□ -2.28
TO15178 RNU7-120P-201ENST00000459334 63 ntBASIC0.79□□□□□ -2.28
TO15178 MIR3973-201ENST00000579824 107 ntBASIC0.79□□□□□ -2.28
TO15178 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
TO15178 MIR6740-201ENST00000618268 113 ntBASIC0.79□□□□□ -2.28
TO15178 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TO15178 SNORD114-22-201ENST00000365423 72 ntBASIC0.78□□□□□ -2.28
TO15178 SNORD12C-201ENST00000386307 89 ntBASIC0.78□□□□□ -2.28
TO15178 SNORD83.1-201ENST00000411362 77 ntBASIC0.78□□□□□ -2.28
TO15178 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.78□□□□□ -2.28
TO15178 RNU6-893P-201ENST00000458841 100 ntBASIC0.78□□□□□ -2.28
TO15178 snoU13.21-201ENST00000459368 105 ntBASIC0.78□□□□□ -2.28
TO15178 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
TO15178 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 337 ms