Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RNU6-54P-201ENST00000365563 107 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 RNU6-746P-201ENST00000384112 109 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 BX295541.1-201ENST00000417774 250 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 UBE2V1P7-201ENST00000446395 340 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 AC097510.1-201ENST00000510945 133 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 Vault.3-201ENST00000516676 95 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 RNU6-809P-201ENST00000384461 107 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 SNORD63B-201ENST00000411005 70 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 MTND4P7-201ENST00000523876 130 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 MIR3139-201ENST00000579145 76 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 AP001542.1-201ENST00000591314 200 ntBASIC-2.31□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.367-201ENST00000365544 101 ntBASIC-2.32□□□□□ -2.78
RGPD3A6NKT7 RNU6-74P-201ENST00000384235 107 ntBASIC-2.32□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.472-201ENST00000384322 102 ntBASIC-2.32□□□□□ -2.78
RGPD3A6NKT7 RNU6-790P-201ENST00000384479 105 ntBASIC-2.32□□□□□ -2.78
RGPD3A6NKT7 SNORD75.2-201ENST00000408784 58 ntBASIC-2.32□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.608-201ENST00000410647 95 ntBASIC-2.32□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.672-201ENST00000516289 104 ntBASIC-2.32□□□□□ -2.78
RGPD3A6NKT7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-2.32□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.33□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.33□□□□□ -2.78
RGPD3A6NKT7 RNU6-470P-201ENST00000515954 104 ntBASIC-2.33□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.809-201ENST00000516058 95 ntBASIC-2.33□□□□□ -2.78
RGPD3A6NKT7 MIR6874-201ENST00000635894 71 ntBASIC-2.33□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.33□□□□□ -2.78
RGPD3A6NKT7 RNY3P9-201ENST00000384727 106 ntBASIC-2.33□□□□□ -2.78
RGPD3A6NKT7 RNU7-106P-201ENST00000459514 67 ntBASIC-2.33□□□□□ -2.78
RGPD3A6NKT7 AC005014.3-201ENST00000605985 190 ntBASIC-2.33□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 RNU6-961P-201ENST00000363893 105 ntBASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.302-201ENST00000364997 102 ntBASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 SNORD116.1-201ENST00000365628 92 ntBASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 RNU6-413P-201ENST00000384115 107 ntBASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 PCMTD1P1-201ENST00000455560 355 ntBASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 Y_RNA.631-201ENST00000459607 101 ntBASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 SNORD67.1-201ENST00000516618 108 ntBASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.34□□□□□ -2.78
RGPD3A6NKT7 SNORA51.5-201ENST00000384126 131 ntBASIC-2.35□□□□□ -2.79
RGPD3A6NKT7 RNU6-524P-201ENST00000384270 107 ntBASIC-2.35□□□□□ -2.79
RGPD3A6NKT7 RNY3P14-201ENST00000384309 102 ntBASIC-2.35□□□□□ -2.79
RGPD3A6NKT7 SNORA20-201ENST00000384662 132 ntBASIC-2.35□□□□□ -2.79
RGPD3A6NKT7 RNU7-187P-201ENST00000458985 68 ntBASIC-2.35□□□□□ -2.79
RGPD3A6NKT7 AL357078.3-201ENST00000607528 618 ntBASIC-2.35□□□□□ -2.79
RGPD3A6NKT7 HULC.1-201ENST00000612720 240 ntBASIC-2.35□□□□□ -2.79
RGPD3A6NKT7 MIR6888-201ENST00000621977 67 ntBASIC-2.35□□□□□ -2.79
RGPD3A6NKT7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.35□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 RNU6-1200P-201ENST00000384162 107 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 MIR507-201ENST00000385234 94 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 MIR519A1-201ENST00000385257 85 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 CYCSP46-201ENST00000423569 204 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 RNU7-80P-201ENST00000459562 61 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 RNU6-334P-201ENST00000517072 102 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 MIR5692C1-201ENST00000585309 91 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 RNU6-1189P-201ENST00000383958 107 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 UBE2V1P12-201ENST00000503954 474 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 AC108019.1-201ENST00000512540 175 ntBASIC-2.36□□□□□ -2.79
RGPD3A6NKT7 RNU6-79P-201ENST00000362511 107 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.207-201ENST00000364142 106 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 RNU6-695P-201ENST00000391157 104 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 MTCO2P21-201ENST00000419780 677 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 AF228730.4-201ENST00000421457 183 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 SNORD36C-201ENST00000516733 66 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 RNU6-1258P-201ENST00000516911 111 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 AC018638.8-201ENST00000588755 281 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 AC104010.1-201ENST00000616889 150 ntBASIC-2.37□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.101-201ENST00000363154 102 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 AL365203.2-201ENST00000423444 196 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 SNORA40.9-201ENST00000515895 93 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 SNORD27.1-201ENST00000516319 72 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 RNU6-365P-201ENST00000517113 106 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 AL118558.2-201ENST00000556294 238 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 AC091932.4-201ENST00000623386 200 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 SNORA53-201ENST00000391141 249 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 AL606923.1-201ENST00000406616 190 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.706-201ENST00000516933 99 ntBASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.38□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.27-201ENST00000362540 103 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 RNU6-553P-201ENST00000364047 96 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 RNU6-801P-201ENST00000364087 105 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 RNU6-80P-201ENST00000384195 107 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 RNY3P4-201ENST00000384428 101 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 RNU6-21P-201ENST00000384710 107 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 MIR516A2-201ENST00000384888 90 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 MIR516A1-201ENST00000385033 90 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 SNORA36B-201ENST00000410438 131 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 AL080274.1-201ENST00000605565 220 ntBASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.39□□□□□ -2.79
RGPD3A6NKT7 AC024909.2-201ENST00000553035 286 ntBASIC-2.4□□□□□ -2.79
RGPD3A6NKT7 AC006566.1-201ENST00000608943 513 ntBASIC-2.4□□□□□ -2.79
RGPD3A6NKT7 MIR376A2-201ENST00000636782 80 ntBASIC-2.4□□□□□ -2.79
RGPD3A6NKT7 RNU6-664P-201ENST00000362381 107 ntBASIC-2.41□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.405-201ENST00000383979 100 ntBASIC-2.41□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.451-201ENST00000384200 100 ntBASIC-2.41□□□□□ -2.79
RGPD3A6NKT7 Y_RNA.524-201ENST00000384564 100 ntBASIC-2.41□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms